prot_Ecto-sp13_S_contig17139.5065.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17139.5065.1
Unique Nameprot_Ecto-sp13_S_contig17139.5065.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length427
Homology
BLAST of mRNA_Ecto-sp13_S_contig17139.5065.1 vs. uniprot
Match: D7G719_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G719_ECTSI)

HSP 1 Score: 661 bits (1706), Expect = 1.590e-216
Identity = 354/413 (85.71%), Postives = 362/413 (87.65%), Query Frame = 0
Query:   10 SRLRGQLQFPPHMGNASAMLSRTGLPALPFLQHALLTHWALSGRMGRAWGLAAAVVDIEAFVLGKTGPTCKGSEETASRXXXXXXXXXXXXXXXXXXXXXXRRTPTPVLSQENFDVFIAAVVKLLPASLALAAPQTPPAGPPATSVQGGATGGGMTGSGVVYAEGGSRAMEPIPGVYCSPYEELECLGMVLECLVEACIESLYNGAWNSSAGTEELTALGRLLRRCVLPVALCCSKTLRALESQLERALAWRCSQTLDLKGVRDRGRSAAVSGGSTEGVDFGAARLCRGLLEQCDLCADAVRTLGTAVRSAAFPEEKDGAADAPSALRPHRTVRDRIVKILPGAVLQSDQLSAAVDRARGVLQLPRKAGRDDDDDRMTEDKDEPSPGHKLPRPTSKTSSRRGASERLLSRFAA 422
            SRLRGQLQFP HMGNASAMLSRTGLPALPFLQHALLTHWALSGRMGRAWGLAAAVVD+EAFVLGKTGPTCKGSE++ASR                        TPTPVLSQEN DVFI AVVKLLPASLALA+PQ P A PP TSVQGGAT   +TGSGVVY E GSR   PIPGV  SPYEELECLGMVLECLVEACIESLYNGAWNSSAG EELTALGRLLRRCVLPVALCCSKTLRALESQLERALAWRCSQTLD+ GVRDRG+SAAV GGSTEGVDFGAARLCRGLLEQCDLCADAVRTLGTAVRSA FPEEKDG ADAPSALRPHRTVRDRIVKILPGAVLQSDQLSAAVD ARGVLQLPRKAGRDDDDD +T DKDE SPGHKLPRPTSKTSSRRGASERLLSR AA
Sbjct: 1590 SRLRGQLQFPSHMGNASAMLSRTGLPALPFLQHALLTHWALSGRMGRAWGLAAAVVDMEAFVLGKTGPTCKGSEDSASRQQSSSARHKATPSSSSWSSSPPTLTPTPVLSQENLDVFITAVVKLLPASLALASPQKPSAEPPGTSVQGGATRNDVTGSGVVYTESGSRVRGPIPGVSSSPYEELECLGMVLECLVEACIESLYNGAWNSSAGAEELTALGRLLRRCVLPVALCCSKTLRALESQLERALAWRCSQTLDVNGVRDRGKSAAVPGGSTEGVDFGAARLCRGLLEQCDLCADAVRTLGTAVRSATFPEEKDGGADAPSALRPHRTVRDRIVKILPGAVLQSDQLSAAVDHARGVLQLPRKAGRDDDDDGITGDKDEASPGHKLPRPTSKTSSRRGASERLLSRCAA 2002          
BLAST of mRNA_Ecto-sp13_S_contig17139.5065.1 vs. uniprot
Match: D7G721_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G721_ECTSI)

HSP 1 Score: 478 bits (1231), Expect = 3.960e-156
Identity = 253/307 (82.41%), Postives = 260/307 (84.69%), Query Frame = 0
Query:   10 SRLRGQLQFPPHMGNASAMLSRTGLPALPFLQHALLTHWALSGRMGRAWGLAAAVVDIEAFVLGKTGPTCKGSEETASRXXXXXXXXXXXXXXXXXXXXXXRRTPTPVLSQENFDVFIAAVVKLLPASLALAAPQTPPAGPPATSVQGGATGGGMTGSGVVYAEGGSRAMEPIPGVYCSPYEELECLGMVLECLVEACIESLYNGAWNSSAGTEELTALGRLLRRCVLPVALCCSKTLRALESQLERALAWRCSQTLDLKGVRDRGRSAAVSGGSTEGVDFGAARLCRGLLEQCDLCADAVRTLGTA 316
            SRLRGQLQFPPHMGNAS MLSRTGLPALPFLQHALLTHWALSGRMGRAWGLAAAVVD+EAFVLGKTGPTCK SEE A R                        TPTPVLSQEN DVFIAAVVKLLP SLALA+PQ P  GPPATSV+GGAT   +TGSGV+YAE GSR   PIPGV  SPYEELECLGMVLECLVEACIESLYNGAWNSSAG EELTALGRLLRRCVLPVALCCSKTLR LESQLERALAWRCSQTLD+KGVRDRG+SA V GGSTEGVDFGAARLCRGLLEQCDLCADAVR LGTA
Sbjct:  781 SRLRGQLQFPPHMGNASVMLSRTGLPALPFLQHALLTHWALSGRMGRAWGLAAAVVDMEAFVLGKTGPTCKSSEEPAFRRQSSSARHKATPSSSSWSSSPP--TPTPVLSQENLDVFIAAVVKLLPTSLALASPQKPLTGPPATSVRGGATRNDVTGSGVIYAESGSRVRGPIPGVSSSPYEELECLGMVLECLVEACIESLYNGAWNSSAGAEELTALGRLLRRCVLPVALCCSKTLRTLESQLERALAWRCSQTLDVKGVRDRGKSATVPGGSTEGVDFGAARLCRGLLEQCDLCADAVRMLGTA 1085          
BLAST of mRNA_Ecto-sp13_S_contig17139.5065.1 vs. uniprot
Match: A0A6H5J6E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6E0_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 2.630e-90
Identity = 167/208 (80.29%), Postives = 174/208 (83.65%), Query Frame = 0
Query:    9 RSRLRGQLQFPPHMGNASAMLSRTGLPALPFLQHALLTHWALSGRMGRAWGLAAAVVDIEAFVLGKTGPTCKGSEETASRXXXXXXXXXXXXXXXXXXXXXXRRTPTPVLSQENFDVFIAAVVKLLPASLALAAPQTPPAGPPATSVQGGATGGGMTGSGVVYAEGGSRAMEPIPGVYCSPYEELECLGMVLECLVEACIESLYNGAW 216
            RSRLRGQLQFPPHMGNASAMLSRTGLPALPFLQHA LTHWALSGRMGRAWG+AAAVVD+EAFVLGKTGPTCKGSEE ASR                 XXXXX     PVLSQENFDVF+A +VKLLPASLALAAPQTPPAGPPA+SVQGGATG  +TG GV+ AEGGSRA   IPGV  SPYEELECLGMVLECLVEACIESLYNGAW
Sbjct: 1156 RSRLRGQLQFPPHMGNASAMLSRTGLPALPFLQHAFLTHWALSGRMGRAWGVAAAVVDVEAFVLGKTGPTCKGSEEPASRQQSSSARHKATPSSSSWXXXXXXXXXXPVLSQENFDVFMATLVKLLPASLALAAPQTPPAGPPASSVQGGATGSCVTGRGVICAEGGSRARGSIPGVSSSPYEELECLGMVLECLVEACIESLYNGAW 1363          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17139.5065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G719_ECTSI1.590e-21685.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G721_ECTSI3.960e-15682.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J6E0_9PHAE2.630e-9080.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17139contigEcto-sp13_S_contig17139:372..3753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17139.5065.1mRNA_Ecto-sp13_S_contig17139.5065.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17139 372..3753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17139.5065.1 ID=prot_Ecto-sp13_S_contig17139.5065.1|Name=mRNA_Ecto-sp13_S_contig17139.5065.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=427bp
MSGTHPFFRSRLRGQLQFPPHMGNASAMLSRTGLPALPFLQHALLTHWAL
SGRMGRAWGLAAAVVDIEAFVLGKTGPTCKGSEETASRQQSSSARHKATS
SSSSWSSSPPRRTPTPVLSQENFDVFIAAVVKLLPASLALAAPQTPPAGP
PATSVQGGATGGGMTGSGVVYAEGGSRAMEPIPGVYCSPYEELECLGMVL
ECLVEACIESLYNGAWNSSAGTEELTALGRLLRRCVLPVALCCSKTLRAL
ESQLERALAWRCSQTLDLKGVRDRGRSAAVSGGSTEGVDFGAARLCRGLL
EQCDLCADAVRTLGTAVRSAAFPEEKDGAADAPSALRPHRTVRDRIVKIL
PGAVLQSDQLSAAVDRARGVLQLPRKAGRDDDDDRMTEDKDEPSPGHKLP
RPTSKTSSRRGASERLLSRFAAAAAAA
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