prot_Ecto-sp13_S_contig17102.5047.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17102.5047.1
Unique Nameprot_Ecto-sp13_S_contig17102.5047.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17102.5047.1 vs. uniprot
Match: D8LEJ1_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ1_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 1.430e-42
Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 0 
Query:   18 SSMRESCQALRSKADRQRKHNKFLNLPGGGRIPYDQDAPDLTLDLANIEGRLTEKEKEHAACPFYRSMSAPKV 90
            SSM+ESCQALRSK DRQRKHNKFLNLPGGGR+PYDQDAPDLTLDLANIEGRLTEKEKEHAACPFYRSMSAPKV
Sbjct:  187 SSMQESCQALRSKVDRQRKHNKFLNLPGGGRVPYDQDAPDLTLDLANIEGRLTEKEKEHAACPFYRSMSAPKV 259
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BLAST of mRNA_Ecto-sp13_S_contig17102.5047.1 vs. uniprot
Match: A0A6H5JZN2_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN2_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.770e-41
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0 
Query:   17 NSSMRESCQALRSKADRQRKHNKFLNLPGGGRIPYDQDAPDLTLDLANIEGRLTEKEKEHAACPFYRSMSAPKVA 91
            NSSMRE CQALRSKADRQRKHNKFLNLPGGGR+PYDQDAPDLTLDLANIEGRLTEKEKEHAACPFYRSMSAPKVA
Sbjct:   66 NSSMREFCQALRSKADRQRKHNKFLNLPGGGRVPYDQDAPDLTLDLANIEGRLTEKEKEHAACPFYRSMSAPKVA 140
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17102.5047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEJ1_ECTSI1.430e-4295.89Helicase ATP-binding domain-containing protein n=1... [more]
A0A6H5JZN2_9PHAE1.770e-4197.33Helicase ATP-binding domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17102contigEcto-sp13_S_contig17102:2227..3191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17102.5047.1mRNA_Ecto-sp13_S_contig17102.5047.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17102 2225..3191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17102.5047.1 ID=prot_Ecto-sp13_S_contig17102.5047.1|Name=mRNA_Ecto-sp13_S_contig17102.5047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
TRGGGGRRRRRQKRNSNSSMRESCQALRSKADRQRKHNKFLNLPGGGRIP
YDQDAPDLTLDLANIEGRLTEKEKEHAACPFYRSMSAPKVA
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