prot_Ecto-sp13_S_contig1710.5045.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1710.5045.1
Unique Nameprot_Ecto-sp13_S_contig1710.5045.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length255
Homology
BLAST of mRNA_Ecto-sp13_S_contig1710.5045.1 vs. uniprot
Match: D7G631_ECTSI (Sld5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G631_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 4.000e-141
Identity = 251/254 (98.82%), Postives = 253/254 (99.61%), Query Frame = 0
Query:    1 MPSADAGGLAQVTAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYVVSGQKSADQRARDLEEKMPATRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPLRPRRVRRFRS 254
            MPSAD+GGLAQ+TAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYVVSGQKSAD RARDLEEKMPATRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPLRPRRVRRFRS
Sbjct:    1 MPSADSGGLAQLTAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYVVSGQKSADHRARDLEEKMPATRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPLRPRRVRRFRS 254          
BLAST of mRNA_Ecto-sp13_S_contig1710.5045.1 vs. uniprot
Match: A0A836CII2_9STRA (Sld5 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII2_9STRA)

HSP 1 Score: 191 bits (486), Expect = 3.370e-57
Identity = 101/192 (52.60%), Postives = 136/192 (70.83%), Query Frame = 0
Query:    2 PSADAGGLAQVTAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDI-EEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYVVSGQKSADQRAR 192
            P ++A  L  ++  ELE++A D ++E+VP   H  LH  +G +GPFV  +R  VPLWLAI LK+R K  IACP +M+   LE+VL  ER +   F  LP HYLEI+SLLL+ A+DD+ ++ DR+R LLED+ENVR+ KMY+GMG AAQ    A+KVN +GAMELLPVR+FF+ AL+S+Y +SG K   + AR
Sbjct:    9 PGSEASTLRHLSPDELEYLAGDEMVEVVPSESHKRLHF-RGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREET-FAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMGDAAQRADGAIKVNRIGAMELLPVRTFFSAALSSMYDISGAKGRAEVAR 198          
BLAST of mRNA_Ecto-sp13_S_contig1710.5045.1 vs. uniprot
Match: A0A4D9D8T4_9STRA (DNA replication complex GINS protein PSF2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8T4_9STRA)

HSP 1 Score: 171 bits (432), Expect = 9.470e-50
Identity = 84/181 (46.41%), Postives = 123/181 (67.96%), Query Frame = 0
Query:   10 AQVTAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQ-----AVKVNDLGAMELLPVRSFFAEALASLYVVSGQK 185
            AQ  ++E+EF+AE+ +IEI  +F H PL LI+G FGPF P  RAKVPLWL ++LKK++KC++  P ++   +L +VLR+ER    +F  LP +Y+EIA+LLL TA+D+   PDR R+L+ED+ENVR  K+  G+   +  V +     + K+N +GAME+  VR F  EA+   Y +SGQ+
Sbjct:    3 AQSRSSEMEFLAEEMIIEIEARFNHPPLKLIRGTFGPFYPNQRAKVPLWLGLSLKKQKKCRLVLPEWLDSEHLAEVLRQERAQEGIFQDLPFYYVEIATLLLATAADEFPMPDRTRSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVRGFLTEAMGLFYTLSGQE 183          
BLAST of mRNA_Ecto-sp13_S_contig1710.5045.1 vs. uniprot
Match: A0A7S2D0T8_9STRA (DNA replication complex GINS protein PSF2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D0T8_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.310e-47
Identity = 87/200 (43.50%), Postives = 127/200 (63.50%), Query Frame = 0
Query:   13 TAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQ------AVKVNDLGAMELLPVRSFFAEALASLYVVSGQKSAD------QRARDLEEKMPA 200
            T  E+EF AE+ L+EI+P+F HG  H I GDFGP VP    KVPLWLA+TL+KRQKC+I  PS++   +L ++L  E+ D   F  LP HY+EIA+ L+ T+++DI + +RVRT+LED++N+R +K+  GM   A +V++      AVK+ ++ A+EL  +R F   AL   Y +S Q SA        R R ++   P+
Sbjct:    6 TVDEIEFRAEEELVEIIPRFAHGIFHFISGDFGPLVPPVPVKVPLWLAVTLRKRQKCKIQPPSWIDYDHLSKILENEQNDLDSFQELPFHYIEIAASLIATSAEDIPDCERVRTILEDIQNLRWSKIRRGMQLIADKVKEDDERITAVKLTNVSALELHAIRPFMTGALNQFYRLSQQPSAQPGLASRSRRRSIQRSSPS 205          
BLAST of mRNA_Ecto-sp13_S_contig1710.5045.1 vs. uniprot
Match: A0A6J1D7Q0_MOMCH (DNA replication complex GINS protein PSF2 n=3 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1D7Q0_MOMCH)

HSP 1 Score: 158 bits (400), Expect = 1.170e-44
Identity = 86/171 (50.29%), Postives = 110/171 (64.33%), Query Frame = 0
Query:    9 LAQVTAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLY 179
            LA  +A E+EF+AED L+EIVP  +  PLHLI GD+GPF PQ  A+VPLWLAI LKKR KC I  P +MSV  L Q+L  ERE    F  LP HY+EI+ LL + A DD+ +   VR+L+ED+ +VR  K+   + S       AVK+ DL AME+  VR F   AL ++Y
Sbjct:    9 LALFSAEEVEFVAEDELVEIVPNMRMDPLHLICGDYGPFYPQIAAEVPLWLAIALKKRGKCAIRSPEWMSVEKLTQILEAERESQGAFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTS-AVKIKDLSAMEVNIVRPFVGRALQAIY 178          
BLAST of mRNA_Ecto-sp13_S_contig1710.5045.1 vs. uniprot
Match: A0A388JJI9_CHABU (Sld5 domain-containing protein (Fragment) n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JJI9_CHABU)

HSP 1 Score: 157 bits (397), Expect = 2.680e-44
Identity = 79/165 (47.88%), Postives = 112/165 (67.88%), Query Frame = 0
Query:   15 AELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLY 179
            AE+EF+AED LI IVP F+   +H++ GDFGPF PQ   KVPLWLA++LKKR+KC +  P +M+V  L +VL  ERE   VF  LP HY+EI+ LL + A +D+ +  ++RTL+ED+ NVR  K+  G+    +  + AVK+N++ AME+  +R FF +AL   Y
Sbjct:    1 AEMEFLAEDELISIVPNFRSDGMHMLCGDFGPFRPQIPVKVPLWLALSLKKRRKCTLQTPDWMNVDNLARVLEEERESTGVFQELPFHYIEISQLLFDNAIEDLCDHYKMRTLIEDIRNVRFNKIQNGL-QQLEGKKNAVKLNNVSAMEINIIRPFFIKALERFY 164          
BLAST of mRNA_Ecto-sp13_S_contig1710.5045.1 vs. uniprot
Match: UPI001FB0930E (DNA replication complex GINS protein PSF2 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0930E)

HSP 1 Score: 157 bits (397), Expect = 4.280e-44
Identity = 89/182 (48.90%), Postives = 118/182 (64.84%), Query Frame = 0
Query:   11 QVTAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYVVS---GQKSADQ 189
            + +AAELEF+AED +IEIVP  K G L+ I GD GPF PQ  AKVPLWLA+ LKKR KC I  P +MSV  L QVL  ER+D AV  PLP HY+EI+ LL + A DDI +   VR+L+ED+++VR  K+  G+   ++    A+K  ++ AME+  VR F  + L + Y +    GQ  AD+
Sbjct:   11 EFSAAELEFLAEDEMIEIVPNMKMGTLNFICGDLGPFHPQLAAKVPLWLAVALKKRGKCTIQPPEWMSVDKLTQVLEAERDDKAVCQPLPFHYVEISRLLFDHARDDIADVYMVRSLIEDIKDVRFHKIGTGLEKISERTS-ALKFKNVSAMEVNIVRPFVVKTLETFYKLDSPDGQDVADR 191          
BLAST of mRNA_Ecto-sp13_S_contig1710.5045.1 vs. uniprot
Match: A0A833QQX9_9POAL (DNA replication complex GINS protein PSF2 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QQX9_9POAL)

HSP 1 Score: 157 bits (397), Expect = 4.410e-44
Identity = 85/167 (50.90%), Postives = 109/167 (65.27%), Query Frame = 0
Query:   13 TAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLY 179
            +A E+EF+AED +IEIVP  +   L+L+ GDFGPF+PQ   KVPLWLA+ LKKR KC I  P +MSV  L QVL  ERE    F PLP HY+EI+ LLL+ A DDI E   VR+L+ED+ NVR  K+  G+ + +     AVK+ +L AME+  VR F    L + Y
Sbjct:   13 SAPEVEFLAEDEMIEIVPNIRMDALNLLCGDFGPFLPQIACKVPLWLAVALKKRGKCSIRTPDWMSVEKLTQVLEAERESPREFQPLPFHYVEISRLLLDHAHDDIPEVYMVRSLIEDIRNVRFHKVESGLETISGRTH-AVKLKNLSAMEVNIVRPFMVRVLQAFY 178          
BLAST of mRNA_Ecto-sp13_S_contig1710.5045.1 vs. uniprot
Match: A0A2Z7API4_9LAMI (DNA replication complex GINS protein PSF2 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7API4_9LAMI)

HSP 1 Score: 156 bits (395), Expect = 7.170e-44
Identity = 84/185 (45.41%), Postives = 121/185 (65.41%), Query Frame = 0
Query:    1 MPSADAGGLAQVTAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYVVSGQK 185
            M  A     +  +AAELEF+AED ++EIVP F+  PL+ I GDFGPF+PQ   +VPLWLA++L+KR KC I  P +MSV  L QVL  ER D+  F PLP HY+EI+ LL + A +DI +   VR+L+ED+++VR  K+  G+   ++E   A+++ +L AME   VR F  +AL + + +S  +
Sbjct:    1 MAGASGSNASAFSAAELEFLAEDEMVEIVPNFRMEPLNFISGDFGPFIPQMPTEVPLWLAVSLRKRGKCTIRTPEWMSVEKLTQVLEAER-DSEKFQPLPFHYVEISRLLFDHAREDIPDIYMVRSLIEDIKDVRFHKIGTGLEIISKERTYALRLKNLSAMEANIVRPFVTKALETFHKLSSSE 184          
BLAST of mRNA_Ecto-sp13_S_contig1710.5045.1 vs. uniprot
Match: A0A022QLV8_ERYGU (DNA replication complex GINS protein PSF2 n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QLV8_ERYGU)

HSP 1 Score: 156 bits (394), Expect = 2.200e-43
Identity = 87/179 (48.60%), Postives = 116/179 (64.80%), Query Frame = 0
Query:    1 MPSADAGGLAQVTAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLY 179
            M SA     +  +AAELEF+AED LIEIVP  +  PL+ I GDFGPF PQ   +VPLWLA+ LKKR KC I  P +MS+  L QVL  ER D+  F PLP HY+EI+ LL + A +DI +   VR+L+ED+++VR  K+  G+   ++E   A+++ +L AME   VR F   AL +LY
Sbjct:    1 MSSASEPHASAFSAAELEFLAEDELIEIVPNLRMDPLNFISGDFGPFRPQIATQVPLWLAVALKKRGKCTIRAPEWMSIDKLSQVLESER-DSEKFQPLPFHYVEISRLLFDHAREDIPDIYMVRSLVEDIKDVRFHKIGTGLEIISKERTYALRLKNLSAMEANIVRPFVTRALETLY 178          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1710.5045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G631_ECTSI4.000e-14198.82Sld5 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CII2_9STRA3.370e-5752.60Sld5 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A4D9D8T4_9STRA9.470e-5046.41DNA replication complex GINS protein PSF2 n=2 Tax=... [more]
A0A7S2D0T8_9STRA1.310e-4743.50DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
A0A6J1D7Q0_MOMCH1.170e-4450.29DNA replication complex GINS protein PSF2 n=3 Tax=... [more]
A0A388JJI9_CHABU2.680e-4447.88Sld5 domain-containing protein (Fragment) n=1 Tax=... [more]
UPI001FB0930E4.280e-4448.90DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
A0A833QQX9_9POAL4.410e-4450.90DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
A0A2Z7API4_9LAMI7.170e-4445.41DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
A0A022QLV8_ERYGU2.200e-4348.60DNA replication complex GINS protein PSF2 n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.5.50coord: 12..77
e-value: 9.2E-27
score: 94.7
NoneNo IPR availableGENE3D1.20.58.1020coord: 78..194
e-value: 2.0E-29
score: 103.7
NoneNo IPR availableSUPERFAMILY160059PriA/YqbF domaincoord: 13..71
IPR021151GINS subunit, domain APFAMPF05916Sld5coord: 54..163
e-value: 1.0E-17
score: 64.5
IPR007257DNA replication complex GINS protein Psf2PANTHERPTHR12772DNA REPLICATION COMPLEX GINS PROTEIN PSF2coord: 11..195
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 74..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1710contigEcto-sp13_S_contig1710:10264..13511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1710.5045.1mRNA_Ecto-sp13_S_contig1710.5045.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1710 10264..14634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1710.5045.1 ID=prot_Ecto-sp13_S_contig1710.5045.1|Name=mRNA_Ecto-sp13_S_contig1710.5045.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=255bp
MPSADAGGLAQVTAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQ
ARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLP
HHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEV
QQAVKVNDLGAMELLPVRSFFAEALASLYVVSGQKSADQRARDLEEKMPA
TRASGGGDDNAGGGGGDDDVGDAAAGLGAVEAAAAGGGEEEEPLRPRRVR
RFRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021151GINS_A
IPR007257GINS_Psf2
IPR036224GINS_bundle-like_dom_sf