prot_Ecto-sp13_S_contig171.5042.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig171.5042.1
Unique Nameprot_Ecto-sp13_S_contig171.5042.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length229
Homology
BLAST of mRNA_Ecto-sp13_S_contig171.5042.1 vs. uniprot
Match: D7FQK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK9_ECTSI)

HSP 1 Score: 396 bits (1017), Expect = 8.130e-139
Identity = 200/206 (97.09%), Postives = 200/206 (97.09%), Query Frame = 0
Query:   24 MLSFSYISCFRSKARYELPKLQEFIVCYRCLSGAFILLLFPLFWVAASEVRPVITPITSFGNGSSWNYGWGRPVLHFGFVFVGMFVDTHQAARLSCLVGMMQAIVLDTLSSYALGTQIDCVQSGRCAVPEHTTLSGLRLLQSRDLTSVALATWALLLAYYLSLVIGMCRTRYNFRQLHAGDHNRVLVMRRELAKRSTR-RDDDNIL 228
            MLSFSYISCFRSKARYEL KLQE IVCYRCLSGAFILLLFPLFWVAASE RPVITPITSFGNGSSWNYGWGRPVLHFG VFVGMFVDTHQAARLSCLVGMMQAIVLDTLSSYALGTQIDCVQSGRCAVPEHTTLSGLRLLQSRDL SVALATWALLLAYYLSLVIGMCRTRYNFRQLHAGDHNRVLVMRRELAKRSTR RDDDNIL
Sbjct:    1 MLSFSYISCFRSKARYELSKLQELIVCYRCLSGAFILLLFPLFWVAASEARPVITPITSFGNGSSWNYGWGRPVLHFGLVFVGMFVDTHQAARLSCLVGMMQAIVLDTLSSYALGTQIDCVQSGRCAVPEHTTLSGLRLLQSRDLASVALATWALLLAYYLSLVIGMCRTRYNFRQLHAGDHNRVLVMRRELAKRSTRNRDDDNIL 206          
BLAST of mRNA_Ecto-sp13_S_contig171.5042.1 vs. uniprot
Match: A0A835Z6W0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6W0_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.050e-39
Identity = 87/216 (40.28%), Postives = 121/216 (56.02%), Query Frame = 0
Query:    6 EDLVTNAGIACAIGFGLFMLSFSYISCFRSKARY--ELPKLQEFIVCYRCLSGAFILLLFPLFWVAAS-EVRPVITPITSFGNGS-SWNYGWGRPVLHFGFVFVGMFVDTHQAARLSCLVGMMQAIVLDTLSSYALGTQIDCVQSGRCAVPEHTTLSGLRLLQSRDLTSVALATWALLLAYYLSLVIGMCRTRYNFRQLHAGDHNRVLVMRRELAK 217
            ++L     I  A   GL      +I+   S  R   E+P+L+  I   R L  A+I LL PL  +AA  +  P+  PIT++ +GS SWNYGWGRP+      F+GMF+D H   R  C+ G+   +VLDT+S+  L TQ  CV  GRC + +  T   L+ L  R++ + A+ T AL    YLS V G+ RTRY +RQLH G HNR   +R+EL +
Sbjct:    2 DELPAPQAIGAAYVAGLCSFVVIFIAALISSRRSVTEIPQLRFLIRALRGLLLAYIALLAPLLTLAARWDAMPIPRPITAYRDGSGSWNYGWGRPMTGMASAFMGMFMDYHPGVRCICMGGLSVGLVLDTISAIDLDTQRYCVAEGRCPMAKGYTAQLLQWLYFREMAACAIGTCALAHILYLSAVTGVFRTRYTYRQLHTGQHNRAAALRKELQR 217          
BLAST of mRNA_Ecto-sp13_S_contig171.5042.1 vs. uniprot
Match: A0A482SH80_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SH80_9ARCH)

HSP 1 Score: 65.5 bits (158), Expect = 4.160e-9
Identity = 43/137 (31.39%), Postives = 70/137 (51.09%), Query Frame = 0
Query:   83 FGNGSSWNYGWGRPVLHFGFVFVGMFVDTHQAARLSCLVGMMQAIVLDTLSSYALGTQIDCVQSGRCAVPEHTTLSGLRLLQSRDLTSVALATWALLLAYYLSLVIGMCRTRY-NFRQLHAGDHNRVLVMRRELAKR 218
            +GNG SW YG+GRP     F+ +G+F   +   R  C++G +  IV D +S++ +      V + + A     +  GL +   RD+ S+AL    L+LA +LS ++G C  +  +  Q+   D +R   M R   KR
Sbjct:   57 YGNGDSWLYGYGRPSAGVIFIGLGLFGALYPVPRTLCILGCVVQIVCDGISAFQIRDYYRQVLN-KSAPGNGYSEQGLMVYYWRDIVSIALTITVLMLACFLSTILGWCDPQLIHPSQVTGNDADRFDAMHRMRLKR 192          
BLAST of mRNA_Ecto-sp13_S_contig171.5042.1 vs. uniprot
Match: A0A024U9B2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9B2_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 9.980e-5
Identity = 36/118 (30.51%), Postives = 56/118 (47.46%), Query Frame = 0
Query:   84 GNGSSWNYGWGRPVLHFGFVFVGMFVDTHQAARLSCLVGMMQAIVLDTLSSYALGTQIDCVQSGR-CAVPEHTTLSGLRLLQSRDLTSVALATWALLLAYYLSLVIGMCRTRYNFRQL 200
            G  +S+     RP+     +  G   + H + R+     +   +V+D++S     +   C   G  C+     T+  L LL  RDL S+ L  WALL+A +L + IG C +RY  RQL
Sbjct:  104 GKAASFFDSIQRPLGAMLGIAFGFSTNFHSSFRVFVATFLAALVVVDSISEVQYVSIRMCATKGALCSSSRTLTVDRLALLIVRDLVSITLQVWALLVAAFLCVSIGTCHSRYTPRQL 221          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig171.5042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FQK9_ECTSI8.130e-13997.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z6W0_9STRA1.050e-3940.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482SH80_9ARCH4.160e-931.39Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A024U9B2_9STRA9.980e-530.51Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..110
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 171..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..170
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
NoneNo IPR availableTMHMMTMhelixcoord: 168..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig171contigEcto-sp13_S_contig171:27678..28364 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig171.5042.1mRNA_Ecto-sp13_S_contig171.5042.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig171 24606..28498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig171.5042.1 ID=prot_Ecto-sp13_S_contig171.5042.1|Name=mRNA_Ecto-sp13_S_contig171.5042.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=229bp
MAAESEDLVTNAGIACAIGFGLFMLSFSYISCFRSKARYELPKLQEFIVC
YRCLSGAFILLLFPLFWVAASEVRPVITPITSFGNGSSWNYGWGRPVLHF
GFVFVGMFVDTHQAARLSCLVGMMQAIVLDTLSSYALGTQIDCVQSGRCA
VPEHTTLSGLRLLQSRDLTSVALATWALLLAYYLSLVIGMCRTRYNFRQL
HAGDHNRVLVMRRELAKRSTRRDDDNIL*
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