prot_Ecto-sp13_S_contig17095.5039.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17095.5039.1
Unique Nameprot_Ecto-sp13_S_contig17095.5039.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length42
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17095.5039.1 vs. uniprot
Match: A0A6H5JKU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU0_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.560e-18
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0 
Query:    1 LSTRRHDQGVFMYWIPSSVFQMGQTYTMKNNKVRESLGLKPL 42
            L TRRHDQGVFMYWIPSS+FQMGQTYTMKNNKVRE LGLKPL
Sbjct:  237 LFTRRHDQGVFMYWIPSSLFQMGQTYTMKNNKVRELLGLKPL 278
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BLAST of mRNA_Ecto-sp13_S_contig17095.5039.1 vs. uniprot
Match: D7FMT8_ECTSI (Oxa1-like homolog, mitochondrial inner membrane insertase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMT8_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 2.620e-14
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 0 
Query:    8 QGVFMYWIPSSVFQMGQTYTMKNNKVRESLGLKPL 42
            QGVFMYWIPS+VFQMGQTYTMKNNKVRE LGLKPL
Sbjct:  195 QGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPL 229
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17095.5039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKU0_9PHAE1.560e-1892.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMT8_ECTSI2.620e-1494.29Oxa1-like homolog, mitochondrial inner membrane in... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17095contigEcto-sp13_S_contig17095:3633..3758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17095.5039.1mRNA_Ecto-sp13_S_contig17095.5039.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17095 3633..3758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17095.5039.1 ID=prot_Ecto-sp13_S_contig17095.5039.1|Name=mRNA_Ecto-sp13_S_contig17095.5039.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=42bp
LSTRRHDQGVFMYWIPSSVFQMGQTYTMKNNKVRESLGLKPL
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