prot_Ecto-sp13_S_contig17003.4995.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17003.4995.1
Unique Nameprot_Ecto-sp13_S_contig17003.4995.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length182
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig17003.4995.1 vs. uniprot
Match: A0A6H5JB41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB41_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 1.020e-115
Identity = 167/181 (92.27%), Postives = 171/181 (94.48%), Query Frame = 0 
Query:    1 SIKRSRGAGKRTPRQGESIRWVASTESGHRARSTLLPRAVWVLLFNQGSGAFSSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKRLGIPRPTRVSMTDLQRFCLDHSFGIWMIPANVVPEAPRKTKKDLGFDPLNLASSPHGRRGARAEAGPVLTPDDIRKWRAKFERLYAQE 181
            SIKRSRGAGKRTPRQGESIRWVASTES HRAR TLLPRAVWVLLF+QGSG+F SSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEK LGIP PTRVSMTDLQRFCLDHSFGI MIPA+VVPEAPRKTKKDLGFDPLNL SSPHGRR A  +AGPVLTPDDIRKWRAKFERLYAQE
Sbjct:   86 SIKRSRGAGKRTPRQGESIRWVASTESEHRARPTLLPRAVWVLLFSQGSGSFGSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKGLGIPTPTRVSMTDLQRFCLDHSFGIRMIPADVVPEAPRKTKKDLGFDPLNLTSSPHGRRDAGEDAGPVLTPDDIRKWRAKFERLYAQE 266
[Close]
BLAST of mRNA_Ecto-sp13_S_contig17003.4995.1 vs. uniprot
Match: D8LLX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX3_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 3.820e-63
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0 
Query:    1 SIKRSRGAGKRTPRQGESIRWVASTESGHRARSTLLPRAVWVLLFNQGSGAFSSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKRLGIPRPTRVSMTDLQ 108
            SIKRSRGAGKRTPRQ ESIRWVASTESGHRARSTLLPRAVWVL+FNQGSG+FSSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEK LGIPRPTRVSMT  +
Sbjct:   38 SIKRSRGAGKRTPRQDESIRWVASTESGHRARSTLLPRAVWVLIFNQGSGSFSSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKGLGIPRPTRVSMTSFE 145
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17003.4995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JB41_9PHAE1.020e-11592.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLX3_ECTSI3.820e-6393.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021503Protein of unknown function DUF3110PFAMPF11360DUF3110coord: 40..124
e-value: 8.4E-11
score: 41.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17003contigEcto-sp13_S_contig17003:2472..3784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17003.4995.1mRNA_Ecto-sp13_S_contig17003.4995.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17003 2472..3784 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17003.4995.1 ID=prot_Ecto-sp13_S_contig17003.4995.1|Name=mRNA_Ecto-sp13_S_contig17003.4995.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
SIKRSRGAGKRTPRQGESIRWVASTESGHRARSTLLPRAVWVLLFNQGSG
AFSSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKRLGIPRPT
RVSMTDLQRFCLDHSFGIWMIPANVVPEAPRKTKKDLGFDPLNLASSPHG
RRGARAEAGPVLTPDDIRKWRAKFERLYAQE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021503DUF3110