prot_Ecto-sp13_S_contig16906.4938.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16906.4938.1
Unique Nameprot_Ecto-sp13_S_contig16906.4938.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length192
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16906.4938.1 vs. uniprot
Match: D8LQQ9_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ9_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 1.720e-103
Identity = 165/175 (94.29%), Postives = 169/175 (96.57%), Query Frame = 0 
Query:    1 MAQLRLPEAVRPEEVKKVTAQLMKIADEERKAVQAARERAIRRSGLDQGTSAPRPFTTGSGEKTVCMTHLWKWHRREHLQWRPSFTAPSRKELRQLNTRQRERERSGEVSRDWARRVILVVGEKEARLQASERFRGYDPPRFVCPECHEFGCSTADALDEHLGDEPWHAVNAALQ 175
            MAQLRLPEAVRPEEVKKV AQL KIADEERKAVQAARERAIRRSGLDQGTSAPRPFTTGSGEKTVCMTHLW+WHRREHLQWRPSFTAPSRKELRQLN RQR+RER GEVSRDWARRVILVVGE+EARLQA+ERFRG DPPRFVCPECHEFGCST DALDEHLGDEPWHAVNAALQ
Sbjct: 1504 MAQLRLPEAVRPEEVKKVAAQLTKIADEERKAVQAARERAIRRSGLDQGTSAPRPFTTGSGEKTVCMTHLWRWHRREHLQWRPSFTAPSRKELRQLNNRQRKRERWGEVSRDWARRVILVVGEREARLQAAERFRGLDPPRFVCPECHEFGCSTPDALDEHLGDEPWHAVNAALQ 1678
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BLAST of mRNA_Ecto-sp13_S_contig16906.4938.1 vs. uniprot
Match: A0A6H5KGV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGV7_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 1.310e-86
Identity = 138/192 (71.88%), Postives = 143/192 (74.48%), Query Frame = 0 
Query:    1 MAQLRLPEAVRPEEVKKVTAQLMKIADEERKAVQAARERAIRRSGLDQGTSAPRPFTTGSGEKTVCMTHLWKWHRREHLQWRPSFTAPSRKELRQLNTRQRERERSGEVSRDWARRVILVVGEKEARLQASERFRGYDPPRFVCPECHEFGCSTADALDEHLGDEPWHAVNAALQVDRVLLHALPLRRTLRH 192
            MAQLRLPEAVRPEEVK V AQL K                                        VCMTHLWKWHRREHLQWRPSFTAPS KELRQLN RQR+RERSGEVSRDWARRVILVVGE+EARLQA+ERFRG+ PPRFVCPECHEFGCSTADALDEHLGDEPWHAVNAALQV R+LLH LPLRRTL H
Sbjct:  195 MAQLRLPEAVRPEEVKNVAAQLTK----------------------------------------VCMTHLWKWHRREHLQWRPSFTAPSHKELRQLNNRQRKRERSGEVSRDWARRVILVVGEREARLQAAERFRGFHPPRFVCPECHEFGCSTADALDEHLGDEPWHAVNAALQVGRILLHTLPLRRTLGH 346
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16906.4938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQQ9_ECTSI1.720e-10394.29Hypothetical leucine rich repeat calcium binding p... [more]
A0A6H5KGV7_9PHAE1.310e-8671.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16906contigEcto-sp13_S_contig16906:2142..3795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16906.4938.1mRNA_Ecto-sp13_S_contig16906.4938.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16906 2142..3795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16906.4938.1 ID=prot_Ecto-sp13_S_contig16906.4938.1|Name=mRNA_Ecto-sp13_S_contig16906.4938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=192bp
MAQLRLPEAVRPEEVKKVTAQLMKIADEERKAVQAARERAIRRSGLDQGT
SAPRPFTTGSGEKTVCMTHLWKWHRREHLQWRPSFTAPSRKELRQLNTRQ
RERERSGEVSRDWARRVILVVGEKEARLQASERFRGYDPPRFVCPECHEF
GCSTADALDEHLGDEPWHAVNAALQVDRVLLHALPLRRTLRH
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