prot_Ecto-sp13_S_contig16429.4636.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16429.4636.1
Unique Nameprot_Ecto-sp13_S_contig16429.4636.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length102
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16429.4636.1 vs. uniprot
Match: A0A6H5L5H5_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H5_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 2.070e-61
Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 0 
Query:    1 MMFVTGARSAWNEDHILSRLPPRLQERILEHVHRDAVLIIPILKTRPPSFVSAILKNLRPRQYSQGEIVFQSLHMSQGVYFVTKGIAEAYVRVTGGAGTEEE 102
            MMFVTGARSAWNEDHILSRLPPRLQER+LEHVHRDAVLIIPILKTRPPSFVSAILKNLRPRQYSQGE+VFQSLHMSQGVYFVTKGIAEAYVRVTGGAG+EEE
Sbjct:    1 MMFVTGARSAWNEDHILSRLPPRLQERVLEHVHRDAVLIIPILKTRPPSFVSAILKNLRPRQYSQGEVVFQSLHMSQGVYFVTKGIAEAYVRVTGGAGSEEE 102
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BLAST of mRNA_Ecto-sp13_S_contig16429.4636.1 vs. uniprot
Match: D7FJ53_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ53_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 1.440e-58
Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 0 
Query:    1 MMFVTGARSAWNEDHILSRLPPRLQERILEHVHRDAVLIIPILKTRPPSFVSAILKNLRPRQYSQGEIVFQSLHMSQGVYFVTKGIAEAYVRVTGGAGTEEE 102
            MMFVTGARSAWNEDHILSRLPPRLQER+LEHVHRDAVLIIP+LKTRPPSFVSAILKNLRPRQYSQGE+VFQSLHMSQGVYFVTKGIAEAYVRVTGGAGTEEE
Sbjct:  895 MMFVTGARSAWNEDHILSRLPPRLQERVLEHVHRDAVLIIPVLKTRPPSFVSAILKNLRPRQYSQGEVVFQSLHMSQGVYFVTKGIAEAYVRVTGGAGTEEE 996
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16429.4636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5H5_9PHAE2.070e-6197.06Cyclic nucleotide-binding domain-containing protei... [more]
D7FJ53_ECTSI1.440e-5897.06Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 8..101
e-value: 1.4E-14
score: 56.0
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 42..102
score: 8.236
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 9..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16429contigEcto-sp13_S_contig16429:465..1249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16429.4636.1mRNA_Ecto-sp13_S_contig16429.4636.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16429 460..1249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16429.4636.1 ID=prot_Ecto-sp13_S_contig16429.4636.1|Name=mRNA_Ecto-sp13_S_contig16429.4636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=102bp
MMFVTGARSAWNEDHILSRLPPRLQERILEHVHRDAVLIIPILKTRPPSF
VSAILKNLRPRQYSQGEIVFQSLHMSQGVYFVTKGIAEAYVRVTGGAGTE
EE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like