prot_Ecto-sp13_S_contig1591.4338.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1591.4338.1
Unique Nameprot_Ecto-sp13_S_contig1591.4338.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
BLAST of mRNA_Ecto-sp13_S_contig1591.4338.1 vs. uniprot
Match: A0A6H5K0T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T1_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 5.630e-45
Identity = 82/84 (97.62%), Postives = 82/84 (97.62%), Query Frame = 0
Query:    1 VNTVVLAVDHADAPDWQLTAQDIFNHTFASIFVVETCLMLYGLGFRCYFSTGRQIFEFVVTMASLIDLVMDLSGACSGHDIVIL 84
            VNTVVLAVDH DAPDWQLTAQDIFNHTFASIFVVETCLMLYGLGFRCYFSTGRQIFEFVVTMASLIDLVMDLSGACSG DIVIL
Sbjct: 1368 VNTVVLAVDHVDAPDWQLTAQDIFNHTFASIFVVETCLMLYGLGFRCYFSTGRQIFEFVVTMASLIDLVMDLSGACSG-DIVIL 1450          
BLAST of mRNA_Ecto-sp13_S_contig1591.4338.1 vs. uniprot
Match: D7FSJ3_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ3_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 6.110e-20
Identity = 43/46 (93.48%), Postives = 46/46 (100.00%), Query Frame = 0
Query:   39 MLYGLGFRCYFSTGRQIFEFVVTMASLIDLVMDLSGACSGHDIVIL 84
            ML+GLGFRCYFSTGRQIFEFVVTMASLIDLVM+LSGACSGHDIV+L
Sbjct:    1 MLFGLGFRCYFSTGRQIFEFVVTMASLIDLVMNLSGACSGHDIVVL 46          
BLAST of mRNA_Ecto-sp13_S_contig1591.4338.1 vs. uniprot
Match: A0A6P7ZLK4_9AMPH (Voltage-dependent L-type calcium channel subunit alpha n=3 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7ZLK4_9AMPH)

HSP 1 Score: 62.0 bits (149), Expect = 2.640e-9
Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 0
Query:    1 VNTVVLAVDHADAPDWQLTAQDIFNHTFASIFVVETCLMLYGLGFRCYFSTGRQIFEFVVTMASLIDLVMDLSG 74
            +NTV +A +H + PDW  +AQD  N    ++F  E  L +Y LGF+ YF +    F+  V  + L+++V+ L+G
Sbjct:  445 LNTVTIATEHHNQPDWVTSAQDTANQVLLALFTAEMALKMYALGFQAYFMSLFNRFDCFVVCSGLLEIVLVLTG 518          
BLAST of mRNA_Ecto-sp13_S_contig1591.4338.1 vs. uniprot
Match: UPI001CF31C8F (voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF31C8F)

HSP 1 Score: 62.0 bits (149), Expect = 2.640e-9
Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    1 VNTVVLAVDHADAPDWQLTAQDIFNHTFASIFVVETCLMLYGLGFRCYFSTGRQIFEFVVTMASLIDLVMD 71
            +NT+VLAV++ + PDW    Q      F +IF VE  L LYGLG   YFS+   IF+F V    +ID++++
Sbjct:  491 LNTIVLAVEYHNQPDWLTEFQYNAEIVFLTIFFVEMLLKLYGLGIHQYFSSSFNIFDFAVVCCGIIDMLIE 561          
BLAST of mRNA_Ecto-sp13_S_contig1591.4338.1 vs. uniprot
Match: A0A7S1LCP1_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1LCP1_NEODS)

HSP 1 Score: 60.1 bits (144), Expect = 1.240e-8
Identity = 27/68 (39.71%), Postives = 44/68 (64.71%), Query Frame = 0
Query:    1 VNTVVLAVDHADAPDWQLTAQDIFNHTFASIFVVETCLMLYGLGFRCYFSTGRQIFEFVVTMASLIDL 68
            +NTVVLA  H + PDW     +  N  F  IFV E  +++ G+GFR +F++G  + +F+V +AS+++L
Sbjct:  516 LNTVVLAAQHHEQPDWMTEWTERANLGFLGIFVFEVVVVMTGVGFRRFFTSGFFVLDFLVVVASIVEL 583          
BLAST of mRNA_Ecto-sp13_S_contig1591.4338.1 vs. uniprot
Match: A0A6P9BSF4_PANGU (Voltage-dependent L-type calcium channel subunit alpha n=15 Tax=Serpentes TaxID=8570 RepID=A0A6P9BSF4_PANGU)

HSP 1 Score: 60.1 bits (144), Expect = 1.260e-8
Identity = 26/70 (37.14%), Postives = 41/70 (58.57%), Query Frame = 0
Query:    1 VNTVVLAVDHADAPDWQLTAQDIFNHTFASIFVVETCLMLYGLGFRCYFSTGRQIFEFVVTMASLIDLVM 70
            +NT+ +A +H D PDW   AQD+ N    S+F VE  L +Y LG R YF +    F+ +V    +++L++
Sbjct:  446 LNTISIATEHHDQPDWLTHAQDVANRVLLSLFAVEMILKMYALGLRQYFMSLFNRFDCLVVCTGILELIL 515          
BLAST of mRNA_Ecto-sp13_S_contig1591.4338.1 vs. uniprot
Match: X6N3J9_RETFI (Voltage-dependent T-type calcium channel subunit alpha-1H n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6N3J9_RETFI)

HSP 1 Score: 58.9 bits (141), Expect = 3.020e-8
Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 0
Query:    1 VNTVVLAVDHADAPDWQLTAQDIFNHTFASIFVVETCLMLYGLGFRCYFSTGRQIFEFVVTMASLIDLVMDLSGACSGH 79
            +NTVVLA+      D   T  ++FN  F  IFV+E  LML GLG R ++S    IF+ ++ M SL+DL++    + S H
Sbjct:  214 LNTVVLALVWPHMNDTAKTVLEVFNSIFTVIFVIELVLMLIGLGPRLWWSDHSNIFDGIIVMVSLVDLIV---SSASNH 289          
BLAST of mRNA_Ecto-sp13_S_contig1591.4338.1 vs. uniprot
Match: A0A7S1PS16_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1PS16_NEODS)

HSP 1 Score: 58.5 bits (140), Expect = 4.300e-8
Identity = 24/77 (31.17%), Postives = 42/77 (54.55%), Query Frame = 0
Query:    1 VNTVVLAVDHADAPDWQLTAQDIFNHTFASIFVVETCLMLYGLGFRCYFSTGRQIFEFVVTMASLIDLVMDLSGACS 77
            +NT+VLA  H D P W      I N+ F +IF +E  L++  LGF  YF+    + + ++ + S++++ +   G  S
Sbjct:  178 LNTIVLAAQHHDQPQWLDDVSTIANYVFTAIFTIEVTLVMTALGFYRYFTDAMLVLDLIIVVVSIVEIFLTGGGVVS 254          
BLAST of mRNA_Ecto-sp13_S_contig1591.4338.1 vs. uniprot
Match: A0A670JHM7_PODMU (Voltage-dependent L-type calcium channel subunit alpha n=9 Tax=Lacertinae TaxID=162266 RepID=A0A670JHM7_PODMU)

HSP 1 Score: 58.5 bits (140), Expect = 4.380e-8
Identity = 24/70 (34.29%), Postives = 41/70 (58.57%), Query Frame = 0
Query:    1 VNTVVLAVDHADAPDWQLTAQDIFNHTFASIFVVETCLMLYGLGFRCYFSTGRQIFEFVVTMASLIDLVM 70
            +NT+ +A +H   PDW   AQDI N    ++F +E  L +Y LGFR YF +    F+ +V    ++++++
Sbjct:  446 LNTISIATEHHQQPDWLTKAQDIANRVLLALFTIEMILKMYALGFRQYFMSIFNRFDCLVVCTGILEIIL 515          
BLAST of mRNA_Ecto-sp13_S_contig1591.4338.1 vs. uniprot
Match: A0A7S3XP57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP57_HETAK)

HSP 1 Score: 57.4 bits (137), Expect = 1.030e-7
Identity = 32/84 (38.10%), Postives = 47/84 (55.95%), Query Frame = 0
Query:    1 VNTVVLAVDHADAPDWQLTAQDIFNHTFASIFVVETCLMLYGLGFRCYFSTGRQIFEFVVTMASLIDLVMDLSGACSGHDIVIL 84
            + T+VL   H    D     Q I +H  A +F+VET L LYG G + YF     IF+FV+++  L+DL++  +G   G DI +L
Sbjct:  217 IQTLVLCATHVGQSDQFTLFQVIVSHCVAVLFLVETVLKLYGHGVKPYFCRKSNIFDFVISLIGLLDLILFPNGC--GADINLL 298          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1591.4338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0T1_9PHAE5.630e-4597.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSJ3_ECTSI6.110e-2093.48Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6P7ZLK4_9AMPH2.640e-936.49Voltage-dependent L-type calcium channel subunit a... [more]
UPI001CF31C8F2.640e-942.25voltage-dependent L-type calcium channel subunit a... [more]
A0A7S1LCP1_NEODS1.240e-839.71Hypothetical protein (Fragment) n=1 Tax=Neobodo de... [more]
A0A6P9BSF4_PANGU1.260e-837.14Voltage-dependent L-type calcium channel subunit a... [more]
X6N3J9_RETFI3.020e-840.51Voltage-dependent T-type calcium channel subunit a... [more]
A0A7S1PS16_NEODS4.300e-831.17Hypothetical protein (Fragment) n=1 Tax=Neobodo de... [more]
A0A670JHM7_PODMU4.380e-834.29Voltage-dependent L-type calcium channel subunit a... [more]
A0A7S3XP57_HETAK1.030e-738.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 1..71
e-value: 7.5E-12
score: 45.0
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 1..82
e-value: 7.5E-13
score: 50.6
NoneNo IPR availablePANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMcoord: 1..71
NoneNo IPR availablePANTHERPTHR10037:SF62SODIUM CHANNEL PROTEIN 60Ecoord: 1..71
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 3..71
NoneNo IPR availableTMHMMTMhelixcoord: 23..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1591contigEcto-sp13_S_contig1591:382..1501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1591.4338.1mRNA_Ecto-sp13_S_contig1591.4338.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1591 382..1503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1591.4338.1 ID=prot_Ecto-sp13_S_contig1591.4338.1|Name=mRNA_Ecto-sp13_S_contig1591.4338.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
VNTVVLAVDHADAPDWQLTAQDIFNHTFASIFVVETCLMLYGLGFRCYFS
TGRQIFEFVVTMASLIDLVMDLSGACSGHDIVIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
IPR027359Volt_channel_dom_sf