prot_Ecto-sp13_S_contig15791.4265.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15791.4265.1
Unique Nameprot_Ecto-sp13_S_contig15791.4265.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length201
Homology
BLAST of mRNA_Ecto-sp13_S_contig15791.4265.1 vs. uniprot
Match: D8LD70_ECTSI (Condensin complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD70_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 1.640e-114
Identity = 188/201 (93.53%), Postives = 191/201 (95.02%), Query Frame = 0
Query:    1 RVILDEGGQTGGSKVNFQKASCTLDASVKIYSHRVDATHMSSYSLLDNLNRSDNDNADKGTGAAVGSSERSARLGVHETLKKPEQLDQSETDRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVSDGCKVSFDSESSASGTAPPSPEGAEDHPSREKVFRKPEDVEEGEESKDGETHAGEEAGEQRPAAAEATGGMTNIKDL 201
            RVILDEGGQ GGSKVNFQKASCTLDASVKIYSHRVDATH+SSYSLLDNLNRSDNDNADKG GAAVGSSERS RLGVHETLKKPEQLDQSETDRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVSDGCKVSFDSESSA+ TAPPSPEGAED P REKVFRKPEDVE+GEESKDGET  GEEAGEQ PAAAEA GGMTNIKDL
Sbjct:   30 RVILDEGGQMGGSKVNFQKASCTLDASVKIYSHRVDATHISSYSLLDNLNRSDNDNADKGAGAAVGSSERSTRLGVHETLKKPEQLDQSETDRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVSDGCKVSFDSESSAAATAPPSPEGAEDQPRREKVFRKPEDVEDGEESKDGETPTGEEAGEQHPAAAEAAGGMTNIKDL 230          
BLAST of mRNA_Ecto-sp13_S_contig15791.4265.1 vs. uniprot
Match: A0A6H5K318_9PHAE (Condensin complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K318_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 6.810e-107
Identity = 179/225 (79.56%), Postives = 186/225 (82.67%), Query Frame = 0
Query:    1 RVILDEGGQTGGSKVNFQKASCTLDASVKIYSHRVDATHMSSYSLLDNLNRSDNDNADKGTGAAVGSSERSARLGVHETLKKPEQLDQS------------------------ETDRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVSDGCKVSFDSESSASGTAPPSPEGAEDHPSREKVFRKPEDVEEGEESKDGETHAGEEAGEQRPAAAEATGGMTNIKDL 201
            RVILDEGGQ GGSKVNFQKASCTLDASVKIYSHRVDATH+SSYSLLDNLNRSDNDNADKG GAAVGSSERSARLGVHETLKKPEQLDQ                         E DRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVSDGCKVSFDSESSA+ TAPPSPEGA D   R+KVFRKPE V++GE+SKDGET A EEAG+Q PAAAEA  GMTNIKDL
Sbjct:   30 RVILDEGGQMGGSKVNFQKASCTLDASVKIYSHRVDATHISSYSLLDNLNRSDNDNADKGAGAAVGSSERSARLGVHETLKKPEQLDQRHVSTDLLLLHRSLFSFYFLFTVVFEADRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVSDGCKVSFDSESSAAATAPPSPEGAVDRSRRDKVFRKPEGVDDGEDSKDGETPAEEEAGKQHPAAAEAAEGMTNIKDL 254          
BLAST of mRNA_Ecto-sp13_S_contig15791.4265.1 vs. uniprot
Match: A0A6T7G3N6_9STRA (Condensin complex subunit 2 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7G3N6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.460e-29
Identity = 72/136 (52.94%), Postives = 91/136 (66.91%), Query Frame = 0
Query:   14 KVNFQKASCTLDASVKIYSHRVDATHMSSYSLLDNLNRSDNDNADKG-------------TGAAVGSSERSARLGVHETLKK-PEQLDQSETDRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVSD-GCKVSFDSE 134
            +VNF KASCTLDASVKIYS+RVD  H++SY +L NLNR+DN N   G             T + VG  ++S R G  ETL+  P  L+ S+ D A+ +DP+FHKMSK FDE G+KG+LL NL VSD GC + FDS+
Sbjct:  199 RVNFTKASCTLDASVKIYSYRVDDVHLTSYKVLANLNRTDNGNKKGGKNSDDGDEESSNHTASEVGERKQSERRGTTETLESNPSNLNMSKLDSAYDIDPLFHKMSKTFDEGGAKGLLLVNLGVSDHGCGIVFDSK 334          
BLAST of mRNA_Ecto-sp13_S_contig15791.4265.1 vs. uniprot
Match: K0R4E2_THAOC (Condensin complex subunit 2 (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4E2_THAOC)

HSP 1 Score: 114 bits (284), Expect = 9.890e-26
Identity = 72/148 (48.65%), Postives = 92/148 (62.16%), Query Frame = 0
Query:    8 GQTGGSKVNFQKASCTLDASVKIYSHRVDATHMSSYSLLDNLNRSDNDNADKGTGAAVGSSE-------------RSARLGVHETLKKP-EQLDQSETDRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVS-DGCKVSFDSESSASGT 140
            G+TG  +VNF KASCTLDASVKIYS+RVD  H+SSY +L NLNRSD +    G     G +E             R  R G  ET++     ++ S+ D A+ +DP+FHKMSK FDE G+KG+LL NL VS  GC V FDS+ + + T
Sbjct:   42 GRTG--RVNFAKASCTLDASVKIYSYRVDDVHLSSYRVLANLNRSDTNKGRAGGDHEDGGAEDGEXXXXXRKSMRRQRRAGPTETIESNLANINMSKLDSAYDIDPLFHKMSKSFDEGGAKGLLLGNLGVSTSGCHVVFDSKEATADT 187          
BLAST of mRNA_Ecto-sp13_S_contig15791.4265.1 vs. uniprot
Match: A0A7S4HYK3_9STRA (Condensin complex subunit 2 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HYK3_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.230e-24
Identity = 69/138 (50.00%), Postives = 90/138 (65.22%), Query Frame = 0
Query:   11 GGSK--VNFQKASCTLDASVKIYSHRVDATHMSSYSLLDNLNRSDND---NADKGTGAAV-------GSSERSARLGVHETLKKP-EQLDQSETDRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVS-DGCKVSFDSE 134
            G SK  VNF KASCTLDASVKIY +RVD  H++SY +L NLNR+DN    N+ K     V       G  + S R G  +TL+     ++ S+ + A  +DP+F KMSK FDE G+KG+LLNNLSV+ DGC++ FDS+
Sbjct:  236 GSSKKRVNFTKASCTLDASVKIYGYRVDDVHLTSYKVLANLNRTDNGSKKNSHKDASGDVHDGSDPSGGKKTSVRAGPTDTLESNLAAINMSKLEAAPDIDPLFRKMSKAFDEGGAKGLLLNNLSVANDGCRIEFDSK 373          
BLAST of mRNA_Ecto-sp13_S_contig15791.4265.1 vs. uniprot
Match: A0A329ST35_9STRA (Condensin complex subunit 2 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329ST35_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.040e-23
Identity = 64/136 (47.06%), Postives = 84/136 (61.76%), Query Frame = 0
Query:    1 RVILDEGGQTGGSKVNFQKASCTLDASVKIYSHRVDATHMSSYSLLDNLNRSDNDNA--DKGTGAAVGSSERSARLGVHETLKKP-EQLDQSETDRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVSDGCKVSFDS 133
            R+  D  G  G    NFQKASCTLDAS+KIYS+RVD T  SSY +L+NL+R++  +   D G      S+ R  R     T++K    ++    D   + DP+FHKMS+ FDE G+KGMLL NLSV DGCK+  +S
Sbjct:  139 RIAAD--GDAGDDTYNFQKASCTLDASIKIYSYRVDDTWNSSYKILENLSRTEQKHGVDDAGEDGGAASTSRKTRKTHARTIEKNLNNINLKAYDTECEADPLFHKMSQSFDEGGAKGMLLANLSVYDGCKILLNS 272          
BLAST of mRNA_Ecto-sp13_S_contig15791.4265.1 vs. uniprot
Match: A0A485LHY8_9STRA (Condensin complex subunit 2 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHY8_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.890e-23
Identity = 60/119 (50.42%), Postives = 78/119 (65.55%), Query Frame = 0
Query:   16 NFQKASCTLDASVKIYSHRVDATHMSSYSLLDNLNRSDNDNADKGTGAAVGSSERSARLGVHETLKKP-EQLDQSETDRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVSDGCKVSFDS 133
            NFQKASCTLDASVKIYS+RVD T  SS+ +L+NL R D  N D   G        S +L V  T++   + ++    D  F++DP+F KMS+ FDE G+KGML+ NLSV +GCK+  DS
Sbjct:  231 NFQKASCTLDASVKIYSYRVDDTWNSSFKVLENLTRGDEVNHDDDEGEGAERRTTSKKLTVANTIETNLKNINMKSVDLEFQVDPLFQKMSQAFDEGGAKGMLMVNLSVHNGCKIVLDS 349          
BLAST of mRNA_Ecto-sp13_S_contig15791.4265.1 vs. uniprot
Match: B8BWW0_THAPS (Condensin complex subunit 2 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWW0_THAPS)

HSP 1 Score: 106 bits (264), Expect = 4.860e-23
Identity = 70/139 (50.36%), Postives = 86/139 (61.87%), Query Frame = 0
Query:   14 KVNFQKASCTLDASVKIYSHRVDATHMSSYSLLDNLNRSDNDNADKGTGAAV-------------GSSER---SARLGVHETLKKP-EQLDQSETDRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVSD-GCKVSFDSE 134
            +VNF KASCTLDASVKIYS+RVD  H+SSY +L NLNRSDN    KG                  GSS R     R G  ET++     ++ S+ D A+ +DP+FHKMSK FDE G+KG+LL NL VS  GC + FDS+
Sbjct:  224 RVNFTKASCTLDASVKIYSYRVDDVHLSSYRVLANLNRSDN--GKKGGEEXXXXXXXXXXXXXKNGSSVRRRNGERKGNMETIESNLANINMSKLDSAYDIDPLFHKMSKSFDEGGAKGLLLGNLGVSSKGCHIVFDSK 360          
BLAST of mRNA_Ecto-sp13_S_contig15791.4265.1 vs. uniprot
Match: A0A484DXY5_BRELC (Condensin complex subunit 2 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXY5_BRELC)

HSP 1 Score: 105 bits (263), Expect = 6.570e-23
Identity = 62/134 (46.27%), Postives = 83/134 (61.94%), Query Frame = 0
Query:    1 RVILDEGGQTGGSKVNFQKASCTLDASVKIYSHRVDATHMSSYSLLDNLNRSDNDNADKGTGAAVGSSERSARLGVHETLKKP-EQLDQSETDRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVSDGCKVSFDS 133
            RV+ D GG       NFQ+ASCTLDASVKIYS+RVD T  SSY +L+NL+R++  +           + R  R  +  T++K    ++    D   + DP+FHKMS+ FDE G+KGMLL NLSV DGCK+  +S
Sbjct:  143 RVVAD-GGDADDDTYNFQRASCTLDASVKIYSYRVDDTWNSSYKILENLSRTEQKHGHDELSEHPSHTVRKTRKALARTIEKNLNNINLKVYDTECQADPLFHKMSQSFDEGGAKGMLLANLSVYDGCKILLNS 275          
BLAST of mRNA_Ecto-sp13_S_contig15791.4265.1 vs. uniprot
Match: A0A6G0XUU4_9STRA (Condensin complex subunit 2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XUU4_9STRA)

HSP 1 Score: 105 bits (262), Expect = 8.760e-23
Identity = 60/119 (50.42%), Postives = 77/119 (64.71%), Query Frame = 0
Query:   16 NFQKASCTLDASVKIYSHRVDATHMSSYSLLDNLNRSDNDNADKGTGAAVGSSERSARLGVHETLKKP-EQLDQSETDRAFKMDPMFHKMSKIFDEAGSKGMLLNNLSVSDGCKVSFDS 133
            NFQKASCTLDASVKIYS+RVD T  SS+ +L+NL R D    D G   A      S  L V  T++   + ++    D  F++DP+F KMS+ FDE G+KGML+ NLSV +GCK+  DS
Sbjct:  225 NFQKASCTLDASVKIYSYRVDDTWNSSFKVLENLTRGDEVRHDDGDEEATEKRTTSXXLTVANTIETNLKNINMKSVDLEFQVDPLFQKMSQAFDEGGAKGMLMVNLSVHNGCKIVLDS 343          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15791.4265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD70_ECTSI1.640e-11493.53Condensin complex subunit 2 n=1 Tax=Ectocarpus sil... [more]
A0A6H5K318_9PHAE6.810e-10779.56Condensin complex subunit 2 n=1 Tax=Ectocarpus sp.... [more]
A0A6T7G3N6_9STRA2.460e-2952.94Condensin complex subunit 2 n=1 Tax=Attheya septen... [more]
K0R4E2_THAOC9.890e-2648.65Condensin complex subunit 2 (Fragment) n=1 Tax=Tha... [more]
A0A7S4HYK3_9STRA2.230e-2450.00Condensin complex subunit 2 n=1 Tax=Odontella auri... [more]
A0A329ST35_9STRA1.040e-2347.06Condensin complex subunit 2 n=2 Tax=Phytophthora T... [more]
A0A485LHY8_9STRA1.890e-2350.42Condensin complex subunit 2 n=1 Tax=Aphanomyces st... [more]
B8BWW0_THAPS4.860e-2350.36Condensin complex subunit 2 n=1 Tax=Thalassiosira ... [more]
A0A484DXY5_BRELC6.570e-2346.27Condensin complex subunit 2 n=1 Tax=Bremia lactuca... [more]
A0A6G0XUU4_9STRA8.760e-2350.42Condensin complex subunit 2 n=1 Tax=Aphanomyces eu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022816Condensin complex subunit 2/barrenPFAMPF05786Cnd2coord: 12..158
e-value: 6.0E-32
score: 111.2
IPR022816Condensin complex subunit 2/barrenPANTHERPTHR13108FAMILY NOT NAMEDcoord: 9..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15791contigEcto-sp13_S_contig15791:101..3768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15791.4265.1mRNA_Ecto-sp13_S_contig15791.4265.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15791 99..3768 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15791.4265.1 ID=prot_Ecto-sp13_S_contig15791.4265.1|Name=mRNA_Ecto-sp13_S_contig15791.4265.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=201bp
RVILDEGGQTGGSKVNFQKASCTLDASVKIYSHRVDATHMSSYSLLDNLN
RSDNDNADKGTGAAVGSSERSARLGVHETLKKPEQLDQSETDRAFKMDPM
FHKMSKIFDEAGSKGMLLNNLSVSDGCKVSFDSESSASGTAPPSPEGAED
HPSREKVFRKPEDVEEGEESKDGETHAGEEAGEQRPAAAEATGGMTNIKD
L
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022816Condensin_barren_su2