prot_Ecto-sp13_S_contig15121.3866.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15121.3866.1
Unique Nameprot_Ecto-sp13_S_contig15121.3866.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length69
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15121.3866.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 4.460e-8
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0 
Query:    1 WRDDFKHYSRRGAKVAAKRGDFTALRSRV 29
            WRDDFKHYSRRGAKVAAKRGDFTALR  V
Sbjct:  731 WRDDFKHYSRRGAKVAAKRGDFTALRELV 759
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15121.3866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHA0_ECTSI4.460e-893.10Transient Receptor Potential Channel. Partial sequ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15121contigEcto-sp13_S_contig15121:1984..3171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15121.3866.1mRNA_Ecto-sp13_S_contig15121.3866.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15121 1940..3171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15121.3866.1 ID=prot_Ecto-sp13_S_contig15121.3866.1|Name=mRNA_Ecto-sp13_S_contig15121.3866.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=69bp
WRDDFKHYSRRGAKVAAKRGDFTALRSRVRANLKRERSLKGYSNFNEPPI
QQAVYLNGVGERGFSSAR*
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