prot_Ecto-sp13_S_contig1511.3860.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1511.3860.1
Unique Nameprot_Ecto-sp13_S_contig1511.3860.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length176
Homology
BLAST of mRNA_Ecto-sp13_S_contig1511.3860.1 vs. uniprot
Match: D7FJA4_ECTSI (Thioredoxin/AMP-activated kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJA4_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 3.850e-107
Identity = 159/175 (90.86%), Postives = 166/175 (94.86%), Query Frame = 0
Query:    1 MQLASSVVTRAARLAPRRVIPSTPKPAPKIPGTLPCTCNPSTALWHHDSGETSSIKTVRDETELAQLLAATRPSSLVVVKFGEARCKASKVVEEKFKQTAAEFAECDKTDVQFASVDSGSNWLLCQKMGIRSVPHVQIFSGFNGKIADFSLAPPEYDTLDALLGERRDSMLAWKR 175
            MQLASSV TRAARLAPR VIPSTPKPAPKIPG LP   NPSTALWHHDSGETSSI+TVRDETELAQLL ATRPSSLVVVKFG+A CKASK VEEKFKQTAAEF+ECDKTDVQFASVDSGSNWLLC+KMG+RSVPHVQIFSG+NGKIADFSLAPPEYDTLDALLGERRDSMLAWK+
Sbjct:    1 MQLASSVATRAARLAPRSVIPSTPKPAPKIPGHLPGAYNPSTALWHHDSGETSSIQTVRDETELAQLLDATRPSSLVVVKFGKALCKASKAVEEKFKQTAAEFSECDKTDVQFASVDSGSNWLLCKKMGVRSVPHVQIFSGYNGKIADFSLAPPEYDTLDALLGERRDSMLAWKQ 175          
BLAST of mRNA_Ecto-sp13_S_contig1511.3860.1 vs. uniprot
Match: D7G5S5_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S5_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 5.320e-34
Identity = 78/172 (45.35%), Postives = 98/172 (56.98%), Query Frame = 0
Query:   22 STPKPAPKIPGTLPCTCNPSTALWHHDSGETSSI---------------------KTVRDETELAQLLAATRPSSLVVVKFGEARCKASKVVEEKFKQTAAEFAECDKTDVQFASVDSGSNWLLCQKMGIRSVPHVQIFSGFNGKIADFSLAPPEYDTLDALLGERRDSMLA 172
            S   P   +   LP     +T LWH+D    +                       KTV++E EL +LLA+     LVVVKF    C AS+ VE +F+QTAAEF + D   V FA V   SN  LC++MGI+SVPHVQIFSG  GKIADFS+AP +Y+TL +LL ERRDS+ A
Sbjct:   32 SAASPCSNVRSPLPGAYRETTELWHNDKAADAPTDVVEWVWDNRQFRPNPAPPAPKTVKNEAELTKLLAS---DGLVVVKFHAILCDASRAVEGRFRQTAAEFGDMDNKQVTFADVCFDSNRQLCKRMGIKSVPHVQIFSGSKGKIADFSIAPLQYNTLTSLLSERRDSVAA 200          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1511.3860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJA4_ECTSI3.850e-10790.86Thioredoxin/AMP-activated kinase n=1 Tax=Ectocarpu... [more]
D7G5S5_ECTSI5.320e-3445.35Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021149Oligosaccharyl transferase complex, subunit OST3/OST6PFAMPF04756OST3_OST6coord: 61..157
e-value: 1.6E-6
score: 27.7
NoneNo IPR availableGENE3D3.40.30.10coord: 44..160
e-value: 2.3E-12
score: 48.6
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 51..156
NoneNo IPR availablePANTHERPTHR43601FAMILY NOT NAMEDcoord: 51..156
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 52..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1511contigEcto-sp13_S_contig1511:5700..8212 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1511.3860.1mRNA_Ecto-sp13_S_contig1511.3860.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1511 4901..8586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1511.3860.1 ID=prot_Ecto-sp13_S_contig1511.3860.1|Name=mRNA_Ecto-sp13_S_contig1511.3860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp
MQLASSVVTRAARLAPRRVIPSTPKPAPKIPGTLPCTCNPSTALWHHDSG
ETSSIKTVRDETELAQLLAATRPSSLVVVKFGEARCKASKVVEEKFKQTA
AEFAECDKTDVQFASVDSGSNWLLCQKMGIRSVPHVQIFSGFNGKIADFS
LAPPEYDTLDALLGERRDSMLAWKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021149OligosaccharylTrfase_OST3/OST6
IPR036249Thioredoxin-like_sf