prot_Ecto-sp13_S_contig15076.3832.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15076.3832.1
Unique Nameprot_Ecto-sp13_S_contig15076.3832.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length578
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15076.3832.1 vs. uniprot
Match: A0A6H5LMH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMH6_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 3.270e-112
Identity = 333/364 (91.48%), Postives = 335/364 (92.03%), Query Frame = 0 
Query:    1 MAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGMTPLDREQNNPATTEEVLSLPAPTSKQPTTTCGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQDEVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLRAANDASEARLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLEAELVGRAEELRVSEGGNAALRREAAALRGEGEALATRARGLEAELAGARRGLEDAAQE 364
            MAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGM PLDREQNNP TTEE LS+PAPTSKQPT+TCGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQDEVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DLRAAND SEARLR    XXXXXXXXXXXXXXXXXXXXXXXXXXX          ARLE ELVGRAEELR SE GNAALRRE AALRGEGEALA RA  LEAELA ARRGLE AAQE
Sbjct:    1 MAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGMAPLDREQNNPTTTEENLSVPAPTSKQPTSTCGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQDEVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLRAANDVSEARLREAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXERADELTALSARLEVELVGRAEELRESEDGNAALRREVAALRGEGEALAARAGRLEAELADARRGLEGAAQE 364
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BLAST of mRNA_Ecto-sp13_S_contig15076.3832.1 vs. uniprot
Match: D7G205_ECTSI (HMMR_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G205_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 1.640e-102
Identity = 323/369 (87.53%), Postives = 323/369 (87.53%), Query Frame = 0 
Query:    1 MAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGMTPLDREQNNPATTEEVLSLPAPTSKQPTTTCGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQDEVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLRAANDASEARLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLEAELVGRAEELRVSEGGNAALRREAAALRGEGEALATRARGLEAELAGARRGLEDAAQEAEAKA 369
            MAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGMT LDREQNNP TTEEVLSLPAPTSKQPTTTCGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQDEVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             LRAANDASEARL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     ARLEAELVGR EELR SE GNAALRREAAAL       A RA           RGL   AQEAEAKA
Sbjct:    2 MAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGMT-LDREQNNPVTTEEVLSLPAPTSKQPTTTCGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQDEVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKREEALLRDKDGLRAANDASEARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTALSARLEAELVGRGEELRESEDGNAALRREAAALXXXXXXXAARAXXXXXXXXXXXRGLXXXAQEAEAKA 369
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15076.3832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LMH6_9PHAE3.270e-11291.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G205_ECTSI1.640e-10287.53HMMR_C domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 389..444
NoneNo IPR availableCOILSCoilCoilcoord: 344..385
NoneNo IPR availableCOILSCoilCoilcoord: 246..266
NoneNo IPR availableCOILSCoilCoilcoord: 96..130
NoneNo IPR availableCOILSCoilCoilcoord: 169..238
NoneNo IPR availableCOILSCoilCoilcoord: 529..577
NoneNo IPR availableCOILSCoilCoilcoord: 274..308
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 102..574
NoneNo IPR availablePANTHERPTHR34491:SF9coord: 102..574

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15076contigEcto-sp13_S_contig15076:226..3928 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15076.3832.1mRNA_Ecto-sp13_S_contig15076.3832.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15076 226..3931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15076.3832.1 ID=prot_Ecto-sp13_S_contig15076.3832.1|Name=mRNA_Ecto-sp13_S_contig15076.3832.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=578bp
MAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKG
MTPLDREQNNPATTEEVLSLPAPTSKQPTTTCGFGRPRPALNVGASRLEK
VKAEQQEKQLVRLEMEREKLQDEVKTLRSLQGALAKSERHARAESAKVVK
RAQAAERKAATVIADAGRLEEAEAAASRLGAEVAAAALEAERAEAALDDL
RQRKEELTSHAKDLEDRIDELVKAKAEIEFQASEAQKREEALLRDKVDLR
AANDASEARLREAKAASQASSAAAQEATRRAESAGVELAAARERAGELTA
LSARLEAELVGRAEELRVSEGGNAALRREAAALRGEGEALATRARGLEAE
LAGARRGLEDAAQEAEAKAAELSEAEAGLAALSEERAGGAALRQKLESTK
EALAAAEAAGASLEERLEASERDAQRLARELEGAEKGLESARESVACLEG
AVAKGAADAESLRQRLGDALAEGVEYADQHTRVEERLRSSEADCAALWEE
REEAKARLCAAFVEGRALEEKLDESVAGSERLREELGRAEARLATAAREA
EEAGDELSASRRQAAAMKEELEKMTNMW
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