prot_Ecto-sp13_S_contig1503.3803.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1503.3803.1
Unique Nameprot_Ecto-sp13_S_contig1503.3803.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length187
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1503.3803.1 vs. uniprot
Match: A0A6H5KDC4_9PHAE (PFK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC4_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 5.180e-78
Identity = 161/188 (85.64%), Postives = 167/188 (88.83%), Query Frame = 0 
Query:    1 MVATALLAVSAVASXXXXXXXXX-VGAGAGLPAFASPPTVDVGRTLGSWATAAAAGAAGGKSISRHAENLSRGVIRRRWVYKGKQQXXXXXXHGEVAVWGGRPSLRLKAEATGVAFGGEGRAMDRAAQAESKYREALEEALRAAREHGDSSPQAVAAWDIVDEIEASNNSIAWRPALDQACSVAGEGD 187
            MVATALLAVSAVASXXXXXXXXX V AGAGLPAFASP TVDVGRTLGS ATAAAAGAAGGK+  RHAE+LSRGV+RRRWV   KQQ      +GE  V GGR SLRL AEATGVAFGG+GRAMDRAAQAESKYREALEEALRAAREHGD SPQAVAAWD+VDEIEASNNSIAWRPALDQACSVAGEGD
Sbjct:    1 MVATALLAVSAVASXXXXXXXXXGVVAGAGLPAFASPSTVDVGRTLGSRATAAAAGAAGGKTTWRHAEDLSRGVVRRRWVSMEKQQQQ----NGEAVVGGGRRSLRLMAEATGVAFGGDGRAMDRAAQAESKYREALEEALRAAREHGDFSPQAVAAWDVVDEIEASNNSIAWRPALDQACSVAGEGD 184
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BLAST of mRNA_Ecto-sp13_S_contig1503.3803.1 vs. uniprot
Match: D7G165_ECTSI (Pyrophosphate-dependent phosphofructose kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G165_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 2.830e-60
Identity = 129/187 (68.98%), Postives = 132/187 (70.59%), Query Frame = 0 
Query:    1 MVATALLAVSAVASXXXXXXXXXVGAGAGLPAFASPPTVDVGRTLGSWATAAAAGAAGGKSISRHAENLSRGVIRRRWVYKGKQQXXXXXXHGEVAVWGGRPSLRLKAEATGVAFGGEGRAMDRAAQAESKYREALEEALRAAREHGDSSPQAVAAWDIVDEIEASNNSIAWRPALDQACSVAGEGD 187
            MVATALLAVSAVAS         V AGAGLPAFASPPTVD GR LGSWATAAAAGAAG K+  RHAE                                        AEATGVAFGGEGRAMDRA+QAESKYREALEEALRAAREHGDSSPQAVAAWD+VDEIEASNNSIAWRPALDQACSVAGEGD
Sbjct:    1 MVATALLAVSAVASAAAASNAGGVVAGAGLPAFASPPTVDGGRALGSWATAAAAGAAGRKTTWRHAE----------------------------------------AEATGVAFGGEGRAMDRASQAESKYREALEEALRAAREHGDSSPQAVAAWDVVDEIEASNNSIAWRPALDQACSVAGEGD 147
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1503.3803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KDC4_9PHAE5.180e-7885.64PFK domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G165_ECTSI2.830e-6068.98Pyrophosphate-dependent phosphofructose kinase n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1503contigEcto-sp13_S_contig1503:406..5539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1503.3803.1mRNA_Ecto-sp13_S_contig1503.3803.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1503 406..5539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1503.3803.1 ID=prot_Ecto-sp13_S_contig1503.3803.1|Name=mRNA_Ecto-sp13_S_contig1503.3803.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp
MVATALLAVSAVASAAAASNAGGVGAGAGLPAFASPPTVDVGRTLGSWAT
AAAAGAAGGKSISRHAENLSRGVIRRRWVYKGKQQQQQQQQHGEVAVWGG
RPSLRLKAEATGVAFGGEGRAMDRAAQAESKYREALEEALRAAREHGDSS
PQAVAAWDIVDEIEASNNSIAWRPALDQACSVAGEGD
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