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Homology
BLAST of mRNA_Ecto-sp13_S_contig1503.3803.1 vs. uniprot
Match: A0A6H5KDC4_9PHAE (PFK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC4_9PHAE) HSP 1 Score: 254 bits (649), Expect = 5.180e-78 Identity = 161/188 (85.64%), Postives = 167/188 (88.83%), Query Frame = 1
Query: 1 MVATALLAVSAVASXXXXXXXXX-VGAGAGLPAFASPPTVDVGRTLGSWATAAAAGAAGGKSISRHAENLSRGVIRRRWVYKGKQQXXXXXXHGEVAVWGGRPSLRLKAEATGVAFGGEGRAMDRAAQAESKYREALEEALRAAREHGDSSPQAVAAWDIVDEIEASNNSIAWRPALDQACSVAGEGD 561
MVATALLAVSAVASXXXXXXXXX V AGAGLPAFASP TVDVGRTLGS ATAAAAGAAGGK+ RHAE+LSRGV+RRRWV KQQ +GE V GGR SLRL AEATGVAFGG+GRAMDRAAQAESKYREALEEALRAAREHGD SPQAVAAWD+VDEIEASNNSIAWRPALDQACSVAGEGD
Sbjct: 1 MVATALLAVSAVASXXXXXXXXXGVVAGAGLPAFASPSTVDVGRTLGSRATAAAAGAAGGKTTWRHAEDLSRGVVRRRWVSMEKQQQQ----NGEAVVGGGRRSLRLMAEATGVAFGGDGRAMDRAAQAESKYREALEEALRAAREHGDFSPQAVAAWDVVDEIEASNNSIAWRPALDQACSVAGEGD 184
BLAST of mRNA_Ecto-sp13_S_contig1503.3803.1 vs. uniprot
Match: D7G165_ECTSI (Pyrophosphate-dependent phosphofructose kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G165_ECTSI) HSP 1 Score: 205 bits (522), Expect = 2.830e-60 Identity = 129/187 (68.98%), Postives = 132/187 (70.59%), Query Frame = 1
Query: 1 MVATALLAVSAVASXXXXXXXXXVGAGAGLPAFASPPTVDVGRTLGSWATAAAAGAAGGKSISRHAENLSRGVIRRRWVYKGKQQXXXXXXHGEVAVWGGRPSLRLKAEATGVAFGGEGRAMDRAAQAESKYREALEEALRAAREHGDSSPQAVAAWDIVDEIEASNNSIAWRPALDQACSVAGEGD 561
MVATALLAVSAVAS V AGAGLPAFASPPTVD GR LGSWATAAAAGAAG K+ RHAE AEATGVAFGGEGRAMDRA+QAESKYREALEEALRAAREHGDSSPQAVAAWD+VDEIEASNNSIAWRPALDQACSVAGEGD
Sbjct: 1 MVATALLAVSAVASAAAASNAGGVVAGAGLPAFASPPTVDGGRALGSWATAAAAGAAGRKTTWRHAE----------------------------------------AEATGVAFGGEGRAMDRASQAESKYREALEEALRAAREHGDSSPQAVAAWDVVDEIEASNNSIAWRPALDQACSVAGEGD 147
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 1 |
| Seed ortholog score | 209.5 |
| Seed ortholog evalue | 1.3e-51 |
| Seed eggNOG ortholog | 2880.D7G165 |
| Preferred name | pfk |
| Model size | 561 |
| KEGG rclass | RC00002,RC00017 |
| KEGG ko | ko:K00850,ko:K01412 |
| KEGG Reaction | R00756,R03236,R03237,R03238,R03239,R04779 |
| KEGG Pathway | ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 |
| KEGG Module | M00001,M00345 |
| Hectar predicted targeting category | chloroplast |
| GOs | GO:0000166,GO:0003674,GO:0003824,GO:0003872,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009536,GO:0009653,GO:0009888,GO:0009987,GO:0010015,GO:0010053,GO:0016020,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0020015,GO:0022622,GO:0030154,GO:0030554,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042579,GO:0042866,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0048364,GO:0048731,GO:0048856,GO:0048869,GO:0051186,GO:0051188,GO:0055086,GO:0061615,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0090558,GO:0090627,GO:0097159,GO:0097367,GO:0099402,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1905392 |
| Exons | 5 |
| EggNOG free text desc. | 6-phosphofructokinase activity |
| EggNOG OGs | COG0205@1,KOG2440@2759 |
| Ec32 ortholog description | 6-phosphofructokinase |
| Ec32 ortholog | Ec-22_000070.1 |
| EC | 2.7.1.11,3.4.24.64 |
| Cds size | 561 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01002,ko01009,ko03019,ko03029 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462800.7734354-CDS-Ecto-sp13_S_contig1503:405..474 | 1681462800.7734354-CDS-Ecto-sp13_S_contig1503:405..474 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1503 406..474 - |
| 1681462800.7839234-CDS-Ecto-sp13_S_contig1503:1334..1505 | 1681462800.7839234-CDS-Ecto-sp13_S_contig1503:1334..1505 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1503 1335..1505 - |
| 1681462800.7921824-CDS-Ecto-sp13_S_contig1503:2559..2679 | 1681462800.7921824-CDS-Ecto-sp13_S_contig1503:2559..2679 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1503 2560..2679 - |
| 1681462800.800572-CDS-Ecto-sp13_S_contig1503:3622..3759 | 1681462800.800572-CDS-Ecto-sp13_S_contig1503:3622..3759 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1503 3623..3759 - |
| 1681462800.808764-CDS-Ecto-sp13_S_contig1503:5475..5539 | 1681462800.808764-CDS-Ecto-sp13_S_contig1503:5475..5539 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1503 5476..5539 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1503.3803.1 >prot_Ecto-sp13_S_contig1503.3803.1 ID=prot_Ecto-sp13_S_contig1503.3803.1|Name=mRNA_Ecto-sp13_S_contig1503.3803.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp
MVATALLAVSAVASAAAASNAGGVGAGAGLPAFASPPTVDVGRTLGSWAT AAAAGAAGGKSISRHAENLSRGVIRRRWVYKGKQQQQQQQQHGEVAVWGG RPSLRLKAEATGVAFGGEGRAMDRAAQAESKYREALEEALRAAREHGDSS PQAVAAWDIVDEIEASNNSIAWRPALDQACSVAGEGD back to topmRNA from alignment at Ecto-sp13_S_contig1503:406..5539- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig1503.3803.1 ID=mRNA_Ecto-sp13_S_contig1503.3803.1|Name=mRNA_Ecto-sp13_S_contig1503.3803.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5134bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1503:406..5539- (Ectocarpus species13 EcNAP12_S_4_19m) ATGGTTGCTACGGCTCTCCTGGCTGTATCAGCCGTTGCTTCCGCCGCCGC
TGCGTCCAATGCTGGTGAGCTGAGGGAAAGATCTAGGGTCGGTGGCGATT
AGCACGGCTTTTTATGCGTGTTATGATGTTGCCCTGTGCTGCCCTGCAAA
GAGGTATTCTGTGCATAATAAGATAGAGGAAGATTAGAGTCTTCACTCGT
TTTCATCCTGTAGAAAAGAACATCAAGTGAAGTGCTCGAATACTGCAAAA
CTGCTGTCGGTTGCTCTGTCGCCGCGGACTCCGGGCACAGCGAGATTGGT
GGGTGTTGAGATGTAGGGTGTCCAGGAGTGGATTACAGCGGTGTGGGCAT
GGTGGCGCGCAAGATGACGCCTTCCTTGTGCAGAAACTTTATAACAACTT
ACAAACGGTGATCCCACCGGTGCCAGTGCAACAGTGCGTTTCCTTCCAAC
CCATGGCGTATGCGTGTCCGCATGGCAGGCCGATGCCCCCATAACTCACA
TGTGAGAGCGTCCCACATATCCCCACAGCCGTGGTGTCGAGACGAAGCCT
ATTTGTCAGGTTTTGTAGCGCGAGACGTACATTCATGCGCAGTATTGGCC
GTTCGTCTGTTGTGCTCCTGTGATGGAAAGCGGCAAGTTCAACACGCAAA
ACCACATTTTTTCAAAAAAGATGCGGTACATAACCTGCAGCAGCTGTGGC
ACTTATACTGGAAGGAAGCATTATGGAGTTCACCCGAAAGCAGAGGGGCA
ACTGCAGTTCGCTTTGGTGCCGCTGCTACCGCGTGTCGCGTCGTTTCTTC
CTTGAACCGCTACTGCTTTACTTTTTCTTTTTAGACTGTTGTTGTGATCA
ATTCGCACCGCCACGCTCTGTCAAAGGATTACAGCATTAGACTGCTAAAT
GCTCGTTTTGTGCGGCTGTCAAGAGGAATGTTGCTTCTGGAAGTTGGACG
GAAACAGCACAAGAAGCGTTTCGCCGTGGAACATGCGCTGCTCATGTACC
GTGCCATACTCACGAAGACTACAGTCCCGTTTGGCCCTCAGGTGGTACGC
CCAGAACGAACGCGTTATATGCCACCGATTCGCGGGTCATGTTGAATACA
TCCAGGGGATGGGGAACGCATGACGGAGTTTGATGTGTGCATGACACCCA
CGTGCTGGTACGATGTAGGGTGCCCCTTGGGTAGATCGAATGCAACGGAC
TTCCTTCTTATATATCTTCCTCTGGATCTTCTGAATGGCGGTCTCTGCGT
GAAAGTGCACTCTGCTAAGGTGCAGTTGTACAGATACCTCGTAATCGAGC
GCAGACAGCGAGCGGATCATGGCGGTCAAGAATGCCGCCCTCTCCATCGC
ACACACGACCTCCTCACCGCATTCCGGGCATTGTACCGGCCCGACGCTGT
GCCCGTCATTACCGCAAGTGTGCAACGTAGACTACTTATTATCGAAAGAG
AACATGAACCGCGGGGAGAAAGAACACAGCGTGAGTGCGTAGACTAAAAA
TTAAGGAAACACGACCGGTGATTTCTCTCTTCCGCCACCGTTGATTGCTG
CAAAACGGGCCGGGCCCAAAAGTTCGCGAACATGTGGCAACACGGTAAAG
CAATCAACGGTGGATGCTAGACTCTACTACAACCTGTGCTGGACGGCAGT
GGGGATGAATTAAAAAAGCGAGCCTCGACCTCATTTTGACTTTAGTTATC
TAGGGGCCTGTACACTGTACACTGCCGCTTTGACTTGTCGTTCAACGACA
ACTGCTGTTGGTTGTACTGCTGTGCGGCAGGAGGCGTTGGGGCAGGGGCG
GGGTTGCCTGCGTTTGCTTCCCCCCCCACGGTCGACGTCGGCCGTACCCT
AGGCAGTTGGGCAACAGCAGCAGCAGCAGGGGCTGCTGGTGGCAAGAGTA
TCTCGCGTCATGCCGAGGTATGTGCTGCGATTTTATACACCGATATTGTT
GAGTTTTCCCCCCTAGTACGGGATTTCATCGATTTGCAGAGCGCATCAAG
CTATCGCTTTGCATGTTAGCAGCGCTGGCCAGAAGTTTGGACATTGACGC
CCCTTGTACGTGACGAGTTGAGGAGGGTAGGCAGGGCAGCGGTCGCTTCG
GGGCTGATTTCGAAAGCTAGGTCACATAGGTCCACAACCAAGCTTGTGCC
AGCACGAATGGTGGCGTTTTTAGAAGCTTATCGTCGAGGGCTTTCCGTAG
ATATATCGGGCTCTTTCCGCGCCCACTTGAGTGGTGTTAAGAAATCGAGC
TTTCAAAGTCGGTCCAGGGAGGGTGGCCACCTCTCCGCCTCTTGCGGAAA
TCCACCGTACGGTACACGGTACGGTACAGACAATCTTGGTCGTGATGCAA
TCGATCTTTGAAAATCGGTCCACATGTAGGGGGGTGGCCATCTCTCCGCC
TGTTGCAGGTAGTCTAAATTATTGGCTGCGTTGCACTCCTGCCTTTGATG
CTTTTCTATTTGGGCAACCTTGTCTTGGGACAGCGGTTTGTTCAAGGCAC
AGTCGGGCGCAAGTGTAGTCGATAAGACCCCATCTTATCCTTAGGAAGGC
CTTCGCTAGGATAGTAAGCTTTACAGAAGTACATGGGAAGCTCAGTACAG
AGTGGGGTTCCAAAACCGCCCATGTCCTCCAGACCCACTCCATACCCTCG
CGCTAAAACAAAGCTTAGTATGCTCGCAAGGCTACTGTACCCTTCAGGTT
GTCGTTTTGAAAACCAACATTAATGTTCGCACAAAGTTACTGCTGCTGTA
TCCTTACGGTATGGTTTCTGTCGTTTGAAAATGAAGCTTCATATACTGGC
AAGGCAACTGTTGCTGCATCCTCACGTCGTTTGCGGCTTGCTTCCTTTCT
ATTCCTGCAGAACCTCTCCCGGGGGGTTATCCGACGGCGGTGGGTGTATA
AGGGAAAACAGCAGCAGCAGCAGCAGCAGCAGCACGGAGAGGTTGCGGTG
TGGGGTGGCCGACCCTCCTTGCGTCTAAAGGTTCGGAAAAGAGCTGTTGT
GGTTATCCTGGCGGTGAATTCGGTTCCCATTTTGGTTCCACGAAGCCGGC
TCTCTGGCTCTTCAAGCGCGCTCTTTGGCTCTTTGACTGGATTCTTGCTG
CTTCTGCGATGCATGTCCTTGGTTTTTTGTAGTGTCGTCGTTTTGTAGGG
TACAAAAAGACGTCTCGGCCACCGTGGCACGCCAGGGTCAACAAGGACGT
CCGAAGGGCGTATAGTGGCGGGATGTCGGCGTGGACAACTCTTAAGAGTT
GACGTAATGTTGAAATCGTCTCATTGCATGGACGCATGAACGGAAGGAAG
TTATGGTCCAGGGTGCATCTCTTTCATGGCGGTGCTATCGTTTCACCGCA
TGTGTTTTCTGCGTTTTCCACAAAAAAAAACGGGTGAAACGTTTCTGTCG
AAGCTTGTGTGCCCGAGTACAACAAACGGTTGTGAAAATATCGCACGTTA
GGCCAAGCGACGCAAGGAATACTTCAAGCAACATTCGAAAAACAAACGAA
CCGTTGCATGTGCTCATGCGAAAAATTCCACAGTTAACCGGAAGAAAAGA
ACAACTTGAAAAAAAAAAAAACGAAAATATCACGTAAAAGAAAGTTGCTG
CGCCATTGCAAGGAGGCAAAGAATGGTAAAGCCTGCCTACGCAAAAGAAA
GCAAAAAATTATCACGTACAATGACCAGGCAGGGGGCACGCAGCCCTCTA
ACCCTAACCCCAACGTCCATATTTTATCCATATGTTTGCTCACTTTTTGA
AACCTGCGTAGTGTTGAGCAGCGGGTGCTTTCGTCAGAAGCTGCGGGGTT
GTGGTTGACTCAATACCTTGATATTAGAATCCGCAGGGCATGCTTGCCCA
TGCACGCAGAAGGGGATTCTCCCTTCTACAAACACATACGAACATGATAC
ATGAAACCCCCCTAGATCTCCGTAGATCTGTATCTAGTGCTGAGTACACC
TAAGAGTACTGCTGCAAAGACCAATACCACTCCCAACAAAGAAAACGTTT
CGCGCACTGGTGTTCTGCTCCCACCCAACCTCAGGCGGAGGCGACAGGTG
TAGCGTTCGGTGGCGAGGGTCGAGCGATGGATCGAGCGGCACAGGCTGAA
TCGAAGTACCGAGAGGCTTTGGAGGAGGCGTTGCGGGCGGCGAGGGAGCA
CGGGGACTCGTCGCCTCAGGCGGTGGCGGCTTGGGACATTGTCGACGAGA
TCGAGGTGAACCATCCGTGTGAATGGTTGGAAGCTAAGCTTTGCTTTGTT
GTTGACTTCGTGTTGTTCTGGAGCCGTCGTGAGGGTAGTAAGCTTGACCT
TGGTTGTAGTAGGGGGATAGGGATAGGGGTAGGGACAGGGAGTCGAAACC
CCTCTCTGTATCCCATTGATTAAGAGTTAATATCCCCAAAAGGCAGGAGA
GGTGGGTAAGGGTATAGAGAGGAACCCTTCTGTGTGGCAACGGGTTGGAG
TGACGGCACAACTGCGCTGATTTCAAGACAGAAAAAACATCGAAAGAAAA
AACCGCTGTTGAGACCTTAAGTGAGGTACTTCCCTCCCCCGTGCCTGTGC
TGCCGTGGGTCGTTCAGCTGTGGCGGTGTCATTTGACGCTATTGAAGAGC
AAGGTAGTCGGTTCCCCTTTGACAATGATGTGCCTCGTCGTCTGGGTGCT
GACCGCCGCAAACAGCACGCGTCCTTTGCACACGCACTAGTTGACCGGTT
CGTTTGCGGCATGACGTTGCCCCTCGAAGGCTCCCGGCAGCTTCTTCTCC
GGTACAAGCGTTCTGTAATGCAACGGCGTTCACGTTATACGCACAACAAC
TGTAGAGTTGTTCGATCGCATGATACAGGGAGTAACTCTCTCTCTCTAGC
AACTTCCCCCTCTCATCACTATCCTTGCCAATCCTTGCCTTTGTGAAAAC
CCCTATGCATATGATACGACACCCGAAAGGCGTCGTACGAAAGCCAAATT
TCCCACAATTAAGCCTTTCTTCATCAGCCCCATGCTGCCCCTACCCACGC
GTGTTGCGTGTTTTTTTGTTCTCGTATCTCATGCCTGCCTTCTGGAACGC
ATCCCCGCTCGGAAGGCGTCGAATAACTCGATCGCGTGGAGGCCGGCCCT
GGACCAGGCCTGCTCTGTAGCTGGAGAAGGTGAC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig1503:406..5539- >mRNA_Ecto-sp13_S_contig1503.3803.1 ID=mRNA_Ecto-sp13_S_contig1503.3803.1|Name=mRNA_Ecto-sp13_S_contig1503.3803.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=561bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1503:406..5539- (Ectocarpus species13 EcNAP12_S_4_19m) ATGGTTGCTACGGCTCTCCTGGCTGTATCAGCCGTTGCTTCCGCCGCCGC TGCGTCCAATGCTGGAGGCGTTGGGGCAGGGGCGGGGTTGCCTGCGTTTG CTTCCCCCCCCACGGTCGACGTCGGCCGTACCCTAGGCAGTTGGGCAACA GCAGCAGCAGCAGGGGCTGCTGGTGGCAAGAGTATCTCGCGTCATGCCGA GAACCTCTCCCGGGGGGTTATCCGACGGCGGTGGGTGTATAAGGGAAAAC AGCAGCAGCAGCAGCAGCAGCAGCACGGAGAGGTTGCGGTGTGGGGTGGC CGACCCTCCTTGCGTCTAAAGGCGGAGGCGACAGGTGTAGCGTTCGGTGG CGAGGGTCGAGCGATGGATCGAGCGGCACAGGCTGAATCGAAGTACCGAG AGGCTTTGGAGGAGGCGTTGCGGGCGGCGAGGGAGCACGGGGACTCGTCG CCTCAGGCGGTGGCGGCTTGGGACATTGTCGACGAGATCGAGGCGTCGAA TAACTCGATCGCGTGGAGGCCGGCCCTGGACCAGGCCTGCTCTGTAGCTG GAGAAGGTGAC back to top
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