prot_Ecto-sp13_S_contig1498.3771.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1498.3771.1
Unique Nameprot_Ecto-sp13_S_contig1498.3771.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length88
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1498.3771.1 vs. uniprot
Match: D7G3G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G3_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 3.250e-33
Identity = 67/76 (88.16%), Postives = 69/76 (90.79%), Query Frame = 0 
Query:    1 MEPGSTAGPRRIGTGGVRRERTATNTPRLRKSNCRFRSKGEVKRRRDNDRRLADGEGKRDSARQNALGGAGSGSRG 76
            MEPG TAGPRR+GTGG RRERTATNTPRLRKSN RFRSKGEV+RRRDND RLADGEGKRDSAR NA GGAG GSRG
Sbjct:    1 MEPGGTAGPRRVGTGGTRRERTATNTPRLRKSNRRFRSKGEVERRRDNDGRLADGEGKRDSARPNAEGGAGGGSRG 76
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1498.3771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3G3_ECTSI3.250e-3388.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1498contigEcto-sp13_S_contig1498:6264..6615 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1498.3771.1mRNA_Ecto-sp13_S_contig1498.3771.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1498 6264..6615 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1498.3771.1 ID=prot_Ecto-sp13_S_contig1498.3771.1|Name=mRNA_Ecto-sp13_S_contig1498.3771.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp
MEPGSTAGPRRIGTGGVRRERTATNTPRLRKSNCRFRSKGEVKRRRDNDR
RLADGEGKRDSARQNALGGAGSGSRGGQSWEPGAPSLT
back to top