prot_Ecto-sp13_S_contig14978.3770.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14978.3770.1
Unique Nameprot_Ecto-sp13_S_contig14978.3770.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length177
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14978.3770.1 vs. uniprot
Match: D8LPN2_ECTSI (Cir_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPN2_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 3.230e-77
Identity = 160/175 (91.43%), Postives = 161/175 (92.00%), Query Frame = 0 
Query:    1 MGSLFRSGAQTTRGSLPFERRGTSYQPEAATANLPGAAGLCVDEATLHSDRRKHAGKAKXXXXXXXXXXXXXXXXXXXXXXXETRTRSDRDRFARRHGDSAAGLSGGRADEATDAQREQKLKDLRSRRLAREGGERERQIRLLAEREMAGHSLPDERTRAYNNQYNAPAARQNRI 175
            MGSLFRSGAQ  RGSLP ERRGTSYQPEAATANLPGAAGLCVDEAT HS+R K      XXXXXXXXXXXXXXXXXXXXXXX TRTRSDRDRFARRH DSAAGLSGGRADEATDAQREQKLKDLRSRRLAREGGERERQIRLLAEREMAG SLPDERTRAYNNQYNAPAARQNRI
Sbjct:  215 MGSLFRSGAQPMRGSLPLERRGTSYQPEAATANLPGAAGLCVDEATSHSNRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRTRSDRDRFARRHSDSAAGLSGGRADEATDAQREQKLKDLRSRRLAREGGERERQIRLLAEREMAGQSLPDERTRAYNNQYNAPAARQNRI 389
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14978.3770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPN2_ECTSI3.230e-7791.43Cir_N domain-containing protein n=2 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14978contigEcto-sp13_S_contig14978:2127..2831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14978.3770.1mRNA_Ecto-sp13_S_contig14978.3770.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14978 1670..3647 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14978.3770.1 ID=prot_Ecto-sp13_S_contig14978.3770.1|Name=mRNA_Ecto-sp13_S_contig14978.3770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=177bp
MGSLFRSGAQTTRGSLPFERRGTSYQPEAATANLPGAAGLCVDEATLHSD
RRKHAGKAKKVKKDKKGKKGKKKNAKEKRHSKETRTRSDRDRFARRHGDS
AAGLSGGRADEATDAQREQKLKDLRSRRLAREGGERERQIRLLAEREMAG
HSLPDERTRAYNNQYNAPAARQNRIL*
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