prot_Ecto-sp13_S_contig14966.3761.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14966.3761.1
Unique Nameprot_Ecto-sp13_S_contig14966.3761.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length202
Homology
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: D8LJN5_ECTSI (Ubiquitin conjugating enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN5_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 1.620e-62
Identity = 110/201 (54.73%), Postives = 110/201 (54.73%), Query Frame = 0
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 201
            VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNG                                                                                           TQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV
Sbjct:   12 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNG-------------------------------------------------------------------------------------------TQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 121          
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A835Z3M3_9STRA (Ubiquitin conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3M3_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.160e-37
Identity = 78/201 (38.81%), Postives = 92/201 (45.77%), Query Frame = 0
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 201
            +PRNFKLLEELEK EKG GD + SFGLV+ DDIFMTDWNG+ILGP G                                                                                           T HE RLY +R+HCGE YPD  P VRF+ ++N+ CVDQR+GEV + +LPVL+ WNRNYGIEQV
Sbjct:   12 IPRNFKLLEELEKSEKGHGDMNTSFGLVNQDDIFMTDWNGSILGPPG-------------------------------------------------------------------------------------------TIHETRLYEVRLHCGESYPDVAPEVRFLHRINLSCVDQRTGEVIKARLPVLSSWNRNYGIEQV 121          
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A2H5MYB3_CITUN (UBC core domain-containing protein n=1 Tax=Citrus unshiu TaxID=55188 RepID=A0A2H5MYB3_CITUN)

HSP 1 Score: 137 bits (346), Expect = 7.160e-37
Identity = 79/214 (36.92%), Postives = 113/214 (52.80%), Query Frame = 0
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRL--NEPFGCACSRG-----------RTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 201
            VPRNF+LLEELE+GEKG+GD +VS+G+ DGDDI+M  W GT++GP+      + +  + W S+K  QA + A  W  RR            P S    +  +  N     AC+ G           R   YS A +E    +         T HEGR+Y L++ C ++YP++ P VRF S++NM CV+  +G V   K  +LA W R Y +E +
Sbjct:   12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTVIGPHNYALYIDVQYMSSWASLK--QARNVASNWYMRRSLRPQYLMFLEPPLSWVLRVSSILVNGGSALACNIGFELCHTDSAHERKTSYSVADIEKSVVL---------TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMEDI 214          
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A7S2EGX9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EGX9_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.360e-33
Identity = 74/201 (36.82%), Postives = 85/201 (42.29%), Query Frame = 0
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 201
            VPRNFKLLEELE  EKG+GD ++S+GLVD  D F+T+WNG ILGP G                                                                                           TQH+ R Y LRIHCGE YP   P VRFVS++NM CVDQ++G V  NKLP    WNRN GIEQV
Sbjct:   40 VPRNFKLLEELEHSEKGLGDMAISYGLVDSGDTFLTNWNGGILGPPG-------------------------------------------------------------------------------------------TQHDSRFYELRIHCGERYPAAPPDVRFVSRINMACVDQKTGVVLHNKLPATRNWNRNMGIEQV 149          
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A4Y9ZLF1_9AGAM (UBC core domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZLF1_9AGAM)

HSP 1 Score: 125 bits (315), Expect = 5.310e-33
Identity = 78/201 (38.81%), Postives = 101/201 (50.25%), Query Frame = 0
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 201
            VPRNF+LLEELEKGEKG+GD S S+GL DGDDI M++WNGTI+GP  V       R   +  +  +  DSK                                  FG           SC                 QT HE R+Y+L+I CGE YPD  P V+FVS++N+  V+Q  G+V R+KLP+LA W+R+  IE +
Sbjct:   23 VPRNFRLLEELEKGEKGIGDGSCSYGLEDGDDILMSNWNGTIIGPGHV-------RIFCFSFLIALANDSK----------------------------------FG-----------SCGV---------------QTVHENRIYSLKILCGENYPDAPPTVQFVSRVNLPFVNQTDGKVDRSKLPLLAAWDRSKSIETI 156          
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A5B1QIS4_9AGAM (UBC-like protein n=1 Tax=Dentipellis sp. KUC8613 TaxID=1883078 RepID=A0A5B1QIS4_9AGAM)

HSP 1 Score: 123 bits (309), Expect = 1.230e-32
Identity = 74/201 (36.82%), Postives = 91/201 (45.27%), Query Frame = 0
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 201
            VPRNF+LLEELEKGEKG+GD S S+GL DGDDI M+DWNGTI+GP                                                                   G TV                        HE R+Y+L+I CGE YPD+ P+V+F+S++N+  V Q  G+V R+KLPVLA WNRN  IE V
Sbjct:    4 VPRNFRLLEELEKGEKGIGDGSCSYGLEDGDDILMSDWNGTIIGP-------------------------------------------------------------------GHTV------------------------HENRIYSLKIVCGESYPDQPPIVQFISRVNLPFVSQTDGKVDRSKLPVLANWNRNSSIETV 113          
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: W2RIE0_9EURO (UBC core domain-containing protein n=2 Tax=Chaetothyriales TaxID=34395 RepID=W2RIE0_9EURO)

HSP 1 Score: 123 bits (309), Expect = 1.260e-32
Identity = 71/201 (35.32%), Postives = 91/201 (45.27%), Query Frame = 0
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 201
            VPRNF+LLEELEKGEKG+G  + S+GL DGDD+ MT+WNGTILGP                                                   PH                                        + HE R+Y++ IHCG++YPD+ PV++FVSK+N+ CVDQR+G+V   KLP LA W R Y +E V
Sbjct:    5 VPRNFRLLEELEKGEKGLGAEACSYGLADGDDLMMTNWNGTILGP---------------------------------------------------PH----------------------------------------SAHENRIYSVNIHCGDDYPDKPPVLQFVSKINVPCVDQRTGKVDPTKLPCLASWRREYTMETV 114          
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A7R9WWW4_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WWW4_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.260e-32
Identity = 73/201 (36.32%), Postives = 87/201 (43.28%), Query Frame = 0
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 201
            VPRNFKLLEELEK EKG+GD ++SFGLVD  D F+++WNG ILGP G                                                                                           TQH+GR Y LRIHC E+YP   P VRFVSK+NM CVD RSG +  +K+P +  WNRN GIEQ+
Sbjct:   13 VPRNFKLLEELEKSEKGLGDMAISFGLVDSGDTFLSNWNGGILGPGG-------------------------------------------------------------------------------------------TQHDGRFYQLRIHCPEKYPAVPPEVRFVSKINMTCVDSRSGALKIDKVPAMRNWNRNMGIEQI 122          
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: S7QBC6_GLOTA (UBC-like protein n=2 Tax=Gloeophyllales TaxID=452339 RepID=S7QBC6_GLOTA)

HSP 1 Score: 122 bits (306), Expect = 3.480e-32
Identity = 71/201 (35.32%), Postives = 91/201 (45.27%), Query Frame = 0
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 201
            +PRNF+LLEELEKGEKG+GD S S+GL DGDD+ M+ WNGTI+GP                                                                   G TV                        HE R+Y+L+IHCG++YP+R P V+F+SK+N+  V Q  G+V  +KLPVLA WNRN+ IE V
Sbjct:    4 IPRNFRLLEELEKGEKGIGDGSCSYGLEDGDDMLMSSWNGTIIGP-------------------------------------------------------------------GHTV------------------------HENRIYSLKIHCGDDYPERPPTVQFISKVNLPFVSQTDGKVDPSKLPVLAHWNRNHSIETV 113          
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A662XS71_9STRA (UBC core domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XS71_9STRA)

HSP 1 Score: 123 bits (308), Expect = 8.540e-32
Identity = 74/201 (36.82%), Postives = 90/201 (44.78%), Query Frame = 0
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 201
            VPRNFKLLEELE  EKG GD S+S+GL   DDIF+T+W GTILGP GV  A                                                FR++  FG                              QT H+GR+Y+LRIHC ++YP   P V F S++NM CVD +SG V   +L  L  W+RN GIE V
Sbjct:   46 VPRNFKLLEELENSEKGHGDMSISYGLEQADDIFLTNWIGTILGPAGVRAA-----------------------------------------------AFRVDVSFG------------------------------QTCHDGRIYSLRIHCSDQYPHIPPEVHFTSRINMSCVDAQSGRVDPRRLAALGNWHRNNGIENV 169          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN5_ECTSI1.620e-6254.73Ubiquitin conjugating enzyme n=2 Tax=Ectocarpus Ta... [more]
A0A835Z3M3_9STRA1.160e-3738.81Ubiquitin conjugating enzyme n=1 Tax=Tribonema min... [more]
A0A2H5MYB3_CITUN7.160e-3736.92UBC core domain-containing protein n=1 Tax=Citrus ... [more]
A0A7S2EGX9_9STRA4.360e-3336.82Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A4Y9ZLF1_9AGAM5.310e-3338.81UBC core domain-containing protein n=1 Tax=Hericiu... [more]
A0A5B1QIS4_9AGAM1.230e-3236.82UBC-like protein n=1 Tax=Dentipellis sp. KUC8613 T... [more]
W2RIE0_9EURO1.260e-3235.32UBC core domain-containing protein n=2 Tax=Chaetot... [more]
A0A7R9WWW4_9STRA2.260e-3236.32Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
S7QBC6_GLOTA3.480e-3235.32UBC-like protein n=2 Tax=Gloeophyllales TaxID=4523... [more]
A0A662XS71_9STRA8.540e-3236.82UBC core domain-containing protein (Fragment) n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 131..201
e-value: 3.3E-21
score: 77.4
coord: 1..62
e-value: 1.3E-16
score: 62.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..49
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 136..201
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 135..201
e-value: 1.3E-7
score: 31.3
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 136..201
score: 10.798
NoneNo IPR availablePANTHERPTHR24068:SF237coord: 1..48
coord: 136..201
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 1..48
coord: 136..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14966contigEcto-sp13_S_contig14966:2232..3074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14966.3761.1mRNA_Ecto-sp13_S_contig14966.3761.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14966 2232..3074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14966.3761.1 ID=prot_Ecto-sp13_S_contig14966.3761.1|Name=mRNA_Ecto-sp13_S_contig14966.3761.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp
VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPR
AWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIF
RLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRI
HCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQ
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2