mRNA_Ecto-sp13_S_contig14966.3761.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: D8LJN5_ECTSI (Ubiquitin conjugating enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN5_ECTSI) HSP 1 Score: 199 bits (507), Expect = 1.620e-62 Identity = 110/201 (54.73%), Postives = 110/201 (54.73%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 603
VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNG TQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV
Sbjct: 12 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNG-------------------------------------------------------------------------------------------TQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 121
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A835Z3M3_9STRA (Ubiquitin conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3M3_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.160e-37 Identity = 78/201 (38.81%), Postives = 92/201 (45.77%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 603
+PRNFKLLEELEK EKG GD + SFGLV+ DDIFMTDWNG+ILGP G T HE RLY +R+HCGE YPD P VRF+ ++N+ CVDQR+GEV + +LPVL+ WNRNYGIEQV
Sbjct: 12 IPRNFKLLEELEKSEKGHGDMNTSFGLVNQDDIFMTDWNGSILGPPG-------------------------------------------------------------------------------------------TIHETRLYEVRLHCGESYPDVAPEVRFLHRINLSCVDQRTGEVIKARLPVLSSWNRNYGIEQV 121
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A2H5MYB3_CITUN (UBC core domain-containing protein n=1 Tax=Citrus unshiu TaxID=55188 RepID=A0A2H5MYB3_CITUN) HSP 1 Score: 137 bits (346), Expect = 7.160e-37 Identity = 79/214 (36.92%), Postives = 113/214 (52.80%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRL--NEPFGCACSRG-----------RTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 603
VPRNF+LLEELE+GEKG+GD +VS+G+ DGDDI+M W GT++GP+ + + + W S+K QA + A W RR P S + + N AC+ G R YS A +E + T HEGR+Y L++ C ++YP++ P VRF S++NM CV+ +G V K +LA W R Y +E +
Sbjct: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTVIGPHNYALYIDVQYMSSWASLK--QARNVASNWYMRRSLRPQYLMFLEPPLSWVLRVSSILVNGGSALACNIGFELCHTDSAHERKTSYSVADIEKSVVL---------TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMEDI 214
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A7S2EGX9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EGX9_9STRA) HSP 1 Score: 125 bits (315), Expect = 4.360e-33 Identity = 74/201 (36.82%), Postives = 85/201 (42.29%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 603
VPRNFKLLEELE EKG+GD ++S+GLVD D F+T+WNG ILGP G TQH+ R Y LRIHCGE YP P VRFVS++NM CVDQ++G V NKLP WNRN GIEQV
Sbjct: 40 VPRNFKLLEELEHSEKGLGDMAISYGLVDSGDTFLTNWNGGILGPPG-------------------------------------------------------------------------------------------TQHDSRFYELRIHCGERYPAAPPDVRFVSRINMACVDQKTGVVLHNKLPATRNWNRNMGIEQV 149
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A4Y9ZLF1_9AGAM (UBC core domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZLF1_9AGAM) HSP 1 Score: 125 bits (315), Expect = 5.310e-33 Identity = 78/201 (38.81%), Postives = 101/201 (50.25%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 603
VPRNF+LLEELEKGEKG+GD S S+GL DGDDI M++WNGTI+GP V R + + + DSK FG SC QT HE R+Y+L+I CGE YPD P V+FVS++N+ V+Q G+V R+KLP+LA W+R+ IE +
Sbjct: 23 VPRNFRLLEELEKGEKGIGDGSCSYGLEDGDDILMSNWNGTIIGPGHV-------RIFCFSFLIALANDSK----------------------------------FG-----------SCGV---------------QTVHENRIYSLKILCGENYPDAPPTVQFVSRVNLPFVNQTDGKVDRSKLPLLAAWDRSKSIETI 156
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A5B1QIS4_9AGAM (UBC-like protein n=1 Tax=Dentipellis sp. KUC8613 TaxID=1883078 RepID=A0A5B1QIS4_9AGAM) HSP 1 Score: 123 bits (309), Expect = 1.230e-32 Identity = 74/201 (36.82%), Postives = 91/201 (45.27%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 603
VPRNF+LLEELEKGEKG+GD S S+GL DGDDI M+DWNGTI+GP G TV HE R+Y+L+I CGE YPD+ P+V+F+S++N+ V Q G+V R+KLPVLA WNRN IE V
Sbjct: 4 VPRNFRLLEELEKGEKGIGDGSCSYGLEDGDDILMSDWNGTIIGP-------------------------------------------------------------------GHTV------------------------HENRIYSLKIVCGESYPDQPPIVQFISRVNLPFVSQTDGKVDRSKLPVLANWNRNSSIETV 113
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: W2RIE0_9EURO (UBC core domain-containing protein n=2 Tax=Chaetothyriales TaxID=34395 RepID=W2RIE0_9EURO) HSP 1 Score: 123 bits (309), Expect = 1.260e-32 Identity = 71/201 (35.32%), Postives = 91/201 (45.27%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 603
VPRNF+LLEELEKGEKG+G + S+GL DGDD+ MT+WNGTILGP PH + HE R+Y++ IHCG++YPD+ PV++FVSK+N+ CVDQR+G+V KLP LA W R Y +E V
Sbjct: 5 VPRNFRLLEELEKGEKGLGAEACSYGLADGDDLMMTNWNGTILGP---------------------------------------------------PH----------------------------------------SAHENRIYSVNIHCGDDYPDKPPVLQFVSKINVPCVDQRTGKVDPTKLPCLASWRREYTMETV 114
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A7R9WWW4_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WWW4_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.260e-32 Identity = 73/201 (36.32%), Postives = 87/201 (43.28%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 603
VPRNFKLLEELEK EKG+GD ++SFGLVD D F+++WNG ILGP G TQH+GR Y LRIHC E+YP P VRFVSK+NM CVD RSG + +K+P + WNRN GIEQ+
Sbjct: 13 VPRNFKLLEELEKSEKGLGDMAISFGLVDSGDTFLSNWNGGILGPGG-------------------------------------------------------------------------------------------TQHDGRFYQLRIHCPEKYPAVPPEVRFVSKINMTCVDSRSGALKIDKVPAMRNWNRNMGIEQI 122
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: S7QBC6_GLOTA (UBC-like protein n=2 Tax=Gloeophyllales TaxID=452339 RepID=S7QBC6_GLOTA) HSP 1 Score: 122 bits (306), Expect = 3.480e-32 Identity = 71/201 (35.32%), Postives = 91/201 (45.27%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 603
+PRNF+LLEELEKGEKG+GD S S+GL DGDD+ M+ WNGTI+GP G TV HE R+Y+L+IHCG++YP+R P V+F+SK+N+ V Q G+V +KLPVLA WNRN+ IE V
Sbjct: 4 IPRNFRLLEELEKGEKGIGDGSCSYGLEDGDDMLMSSWNGTIIGP-------------------------------------------------------------------GHTV------------------------HENRIYSLKIHCGDDYPERPPTVQFISKVNLPFVSQTDGKVDPSKLPVLAHWNRNHSIETV 113
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Match: A0A662XS71_9STRA (UBC core domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XS71_9STRA) HSP 1 Score: 123 bits (308), Expect = 8.540e-32 Identity = 74/201 (36.82%), Postives = 90/201 (44.78%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRAWNTRRSAHWFSIKPVQADSKARKWGDRRQAHRTQSRAPLTPCSCQPHIFRLNEPFGCACSRGRTVDYSCAFVEGKTPVPPTPPPPRQTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQV 603
VPRNFKLLEELE EKG GD S+S+GL DDIF+T+W GTILGP GV A FR++ FG QT H+GR+Y+LRIHC ++YP P V F S++NM CVD +SG V +L L W+RN GIE V
Sbjct: 46 VPRNFKLLEELENSEKGHGDMSISYGLEQADDIFLTNWIGTILGPAGVRAA-----------------------------------------------AFRVDVSFG------------------------------QTCHDGRIYSLRIHCSDQYPHIPPEVHFTSRINMSCVDAQSGRVDPRRLAALGNWHRNNGIENV 169 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14966.3761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14966.3761.1 >prot_Ecto-sp13_S_contig14966.3761.1 ID=prot_Ecto-sp13_S_contig14966.3761.1|Name=mRNA_Ecto-sp13_S_contig14966.3761.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGVPRback to top mRNA from alignment at Ecto-sp13_S_contig14966:2232..3074- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14966.3761.1 ID=mRNA_Ecto-sp13_S_contig14966.3761.1|Name=mRNA_Ecto-sp13_S_contig14966.3761.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=843bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14966:2232..3074- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14966:2232..3074- >mRNA_Ecto-sp13_S_contig14966.3761.1 ID=mRNA_Ecto-sp13_S_contig14966.3761.1|Name=mRNA_Ecto-sp13_S_contig14966.3761.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=606bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14966:2232..3074- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |