prot_Ecto-sp13_S_contig14945.3755.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14945.3755.1
Unique Nameprot_Ecto-sp13_S_contig14945.3755.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length78
Homology
BLAST of mRNA_Ecto-sp13_S_contig14945.3755.1 vs. uniprot
Match: D8LGK4_ECTSI (alpha-1,2-Mannosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK4_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 9.930e-37
Identity = 65/75 (86.67%), Postives = 68/75 (90.67%), Query Frame = 0
Query:    3 NSQVTVSAWIHVDREMSDIKTVLGNKMSGCGSDALGFALYVNDWNKKDGQLWLEWGDGALGCHKV--KMPSVVGQ 75
            + +VTVSAWIHVDREMSDIKTVLGNKMSGCGSDALGFALYVNDWNKKDGQLWLEWGDGALGCHK+  K    VGQ
Sbjct:  187 SEEVTVSAWIHVDREMSDIKTVLGNKMSGCGSDALGFALYVNDWNKKDGQLWLEWGDGALGCHKIHSKKKVPVGQ 261          
BLAST of mRNA_Ecto-sp13_S_contig14945.3755.1 vs. uniprot
Match: A0A6U4HU98_9STRA (alpha-1,2-Mannosidase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HU98_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.390e-11
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 0
Query:    4 SQVTVSAWIHVDREMSD--------IKTVLGNKMSGCGSDAL--GFALYVNDWNKKDGQLWLEWGDGALGCHKVKM-PSVVGQG 76
            +++T SAWI  + E+          ++TVL N+ SGCG+DAL  GF+L+VN+W   DG L LEW D  LGC K+   P ++  G
Sbjct:  307 ARLTASAWIFPNAEVDGSGVGVPQTMRTVLTNRRSGCGTDALRHGFSLFVNNWETADGCLVLEWADSRLGCQKLSTAPGMIPSG 390          
BLAST of mRNA_Ecto-sp13_S_contig14945.3755.1 vs. uniprot
Match: F0Y5N1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5N1_AURAN)

HSP 1 Score: 65.5 bits (158), Expect = 1.240e-10
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    6 VTVSAWIHVDR--EMSDIKTVLGNKMSGC--GSDALGFALYVNDWNKKDGQLWLEWGDGALGCHKV 67
            V+ +A+++VD   + +DIKTV+ NK +GC  G    G+AL VN+W  +DGQL LEWGD A GC K+
Sbjct:  109 VSGAAFVYVDGADKSADIKTVVSNKETGCDVGDARDGYALAVNNWETRDGQLTLEWGDAATGCRKL 174          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14945.3755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LGK4_ECTSI9.930e-3786.67alpha-1,2-Mannosidase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A6U4HU98_9STRA1.390e-1142.86alpha-1,2-Mannosidase n=1 Tax=Phaeomonas parva Tax... [more]
F0Y5N1_AURAN1.240e-1050.00Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14945contigEcto-sp13_S_contig14945:4056..4289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14945.3755.1mRNA_Ecto-sp13_S_contig14945.3755.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14945 4056..4289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14945.3755.1 ID=prot_Ecto-sp13_S_contig14945.3755.1|Name=mRNA_Ecto-sp13_S_contig14945.3755.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=78bp
MFNSQVTVSAWIHVDREMSDIKTVLGNKMSGCGSDALGFALYVNDWNKKD
GQLWLEWGDGALGCHKVKMPSVVGQGWY
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