prot_Ecto-sp13_S_contig1492.3745.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1492.3745.1
Unique Nameprot_Ecto-sp13_S_contig1492.3745.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length323
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1492.3745.1 vs. uniprot
Match: D7FKK1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKK1_ECTSI)

HSP 1 Score: 533 bits (1372), Expect = 1.890e-189
Identity = 283/322 (87.89%), Postives = 294/322 (91.30%), Query Frame = 0 
Query:    1 MAIWKRFTGAVDSSAQSFLKNKRFSREKRKFTWDWHAWNLVFVSTPSLVLAYYLHGVEKQMLEDAAIREEIQERTGVSSRGFLIPKKEVREEVLGMLSAGNQPGNTGGEGGAGEQQLGHERHVPADSESIERRLATIERMLSMQGGSGSSTPGAGVDNGSGSMTDSTLSSTACSRQGKRVHSARNTASKADSSSGAEVSTLDEAIETASAAGSWLLQTGEAQGKRLLQICRSWMAGDEQKEDATRPGKPGSRNIGTGHREPGANHADVRRQEEPAATALTERAANSSTGSTGEESALVKSDSKGAHRGAWRRGKLDKNDGVR 322
            MAIWKRFTGAVDSSAQSFLKNK+FSREKRKFTWDWHAWNL FVSTPSLVLAYYLHGVEKQMLEDAAIREEIQERTGVSSRGFLIPKKEVREEVLGMLSAGNQPGN GGEGGAGEQQLGHERHVPADSESIE RLATIERMLSMQGGS SSTPGAG+DNGSG MTDSTLS T+ S QGKRVHSARN ASKADSSSGAEVSTLD AIET SAAGSWLLQTGEAQGK      RSWMA DE++EDAT   KPGSR IGTGH+EPGANHADVRR+E+ AA AL ER ANSS GSTGEESALV+SDSKG+H GAWRRGKLD+NDGVR
Sbjct:    1 MAIWKRFTGAVDSSAQSFLKNKKFSREKRKFTWDWHAWNLAFVSTPSLVLAYYLHGVEKQMLEDAAIREEIQERTGVSSRGFLIPKKEVREEVLGMLSAGNQPGNAGGEGGAGEQQLGHERHVPADSESIEGRLATIERMLSMQGGSSSSTPGAGIDNGSGPMTDSTLSGTSGSGQGKRVHSARNAASKADSSSGAEVSTLDRAIETVSAAGSWLLQTGEAQGKXXXXXGRSWMAEDERQEDATPSEKPGSRKIGTGHQEPGANHADVRRREDLAAKALAERVANSSAGSTGEESALVESDSKGSHSGAWRRGKLDENDGVR 322
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1492.3745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKK1_ECTSI1.890e-18987.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..322
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..54
NoneNo IPR availableTMHMMTMhelixcoord: 35..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1492contigEcto-sp13_S_contig1492:8864..10965 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1492.3745.1mRNA_Ecto-sp13_S_contig1492.3745.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1492 8864..10965 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1492.3745.1 ID=prot_Ecto-sp13_S_contig1492.3745.1|Name=mRNA_Ecto-sp13_S_contig1492.3745.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=323bp
MAIWKRFTGAVDSSAQSFLKNKRFSREKRKFTWDWHAWNLVFVSTPSLVL
AYYLHGVEKQMLEDAAIREEIQERTGVSSRGFLIPKKEVREEVLGMLSAG
NQPGNTGGEGGAGEQQLGHERHVPADSESIERRLATIERMLSMQGGSGSS
TPGAGVDNGSGSMTDSTLSSTACSRQGKRVHSARNTASKADSSSGAEVST
LDEAIETASAAGSWLLQTGEAQGKRLLQICRSWMAGDEQKEDATRPGKPG
SRNIGTGHREPGANHADVRRQEEPAATALTERAANSSTGSTGEESALVKS
DSKGAHRGAWRRGKLDKNDGVR*
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