prot_Ecto-sp13_S_contig1491.3735.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1491.3735.1
Unique Nameprot_Ecto-sp13_S_contig1491.3735.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length292
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1491.3735.1 vs. uniprot
Match: A0A6H5K5H0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H0_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 4.150e-62
Identity = 194/268 (72.39%), Postives = 199/268 (74.25%), Query Frame = 0 
Query:    1 MGFGRGGHGAGKAPLIGDDGAKGRDMEGINGSSSPGGEGARGQLDGLRNDSDGINTAAAARASPAVATAVGRRERRRLGGKGKXXXNQDGKXXXXXXXXXXXXXXXXXXXXXXXXGAGETGNKSXXXXXXXXXXXXXXXEEGSGGEDAQPSGGNDGPGIEGSAEEVDESGPGPEAADDLGEVEVDVQVEAENDGLDRPPKAEIEEAGGEEDGDSTDGGGD-VESGSSSGKSEGIGAANAAQXXXXXXXXXXXXXXXXXXEDAGASNVE 267
            MGFGRGG GAGKAPLIGDDGAKGRDM GI GSSSPGGEGARGQLDGLRN SDG N AAAARASPAVATAVG+RERRRLG KG    +QD  XXXXXXXXXXXXXXXXXXXXXXXX      NKS    XXXXXXXXXXX       DAQPSGG DGPGIEGSAEEVDESGP PEAAD LGEVEVDVQVEAENDG+DRPPKAEIEEAG              VESGSSSGK EGIGA +AAQ                  ED G S+VE
Sbjct:    1 MGFGRGGLGAGKAPLIGDDGAKGRDMVGIYGSSSPGGEGARGQLDGLRNHSDGKNAAAAARASPAVATAVGQRERRRLGDKGNDKKSQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NKSHDSDXXXXXXXXXXXXXXXXXXDAQPSGGVDGPGIEGSAEEVDESGPEPEAADGLGEVEVDVQVEAENDGVDRPPKAEIEEAGXXXXXXXXXXXXXXVESGSSSGKIEGIGATDAAQSTASSSDQRDSSGDSAAVEDVGGSDVE 267
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BLAST of mRNA_Ecto-sp13_S_contig1491.3735.1 vs. uniprot
Match: D8LHM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM7_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 2.040e-55
Identity = 176/221 (79.64%), Postives = 182/221 (82.35%), Query Frame = 0 
Query:    1 MGFGRGGHGAGKAPLIGDDGAKGRDMEGINGSSSPGGEGARGQLDGLRNDSDGINTAAAARASPAVATAVGRRERRRLGGKGKXXXNQDGKXXXXXXXXXXXXXXXXXXXXXXXXGAGETGNKSXXXXXXXXXXXXXXX----EEGSGGEDAQPSGGNDGPGIEGSAEEVDESGPGPEAADDLGEVEVDVQVEAENDGLDRPPKAEIEEAGGEEDGDSTDG 217
            MGFGRGG GAGKAPLIGDDGAKGRDME INGSSSPGGEG RGQLDGLRN SDG  TAAAARASPAVATA+G+R          XXX     XXXXXXXXXXXXXXXXXXXXXX  GAG+     XXXXXXXXXXXXXXX    EEGSGGEDA PSGG DGP IEGSAEEVDESGP PE AD LGEVEVDVQVEA++DG DRPPKAEIEEAGGEE+GDSTDG
Sbjct:    1 MGFGRGGLGAGKAPLIGDDGAKGRDMESINGSSSPGGEGPRGQLDGLRNHSDGKITAAAARASPAVATAIGQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKGAGKKXXXXXXXXXXXXXXXXXXXXXXXEEGSGGEDAHPSGGVDGPEIEGSAEEVDESGPEPEVADGLGEVEVDVQVEAKDDGADRPPKAEIEEAGGEEEGDSTDG 221
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1491.3735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5H0_9PHAE4.150e-6272.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHM7_ECTSI2.040e-5579.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1491contigEcto-sp13_S_contig1491:1204..3639 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1491.3735.1mRNA_Ecto-sp13_S_contig1491.3735.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1491 1204..3767 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1491.3735.1 ID=prot_Ecto-sp13_S_contig1491.3735.1|Name=mRNA_Ecto-sp13_S_contig1491.3735.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=292bp
MGFGRGGHGAGKAPLIGDDGAKGRDMEGINGSSSPGGEGARGQLDGLRND
SDGINTAAAARASPAVATAVGRRERRRLGGKGKDKKNQDGKEDEKGEKKR
EANNKKNKDDDQRDKGAGETGNKSHDSDDDGDGDGNGDGEEGSGGEDAQP
SGGNDGPGIEGSAEEVDESGPGPEAADDLGEVEVDVQVEAENDGLDRPPK
AEIEEAGGEEDGDSTDGGGDVESGSSSGKSEGIGAANAAQSTASSSNQRD
SSGGSPVVEDAGASNVEAEEREDGGPGEGGGGASPAEPEEAG
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