prot_Ecto-sp13_S_contig14904.3731.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14904.3731.1
Unique Nameprot_Ecto-sp13_S_contig14904.3731.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length210
Homology
BLAST of mRNA_Ecto-sp13_S_contig14904.3731.1 vs. uniprot
Match: D7G604_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G604_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 4.340e-94
Identity = 137/206 (66.50%), Postives = 160/206 (77.67%), Query Frame = 0
Query:    1 MVSSVTKLVENGEGLVKKAMLTNKFNRIKSQDRYMIPPKKLGPDFLSISKEMENTMVYVVWALDPPGYDRILVEKSTCLLSLDRLGAQVLHRDQNLETMNDRLEGRKRAATRGNTRPQPPPYSALCSFQEGTSLRFVDGSHFDHHKEYSAESAVDYPIPRGWGLLWYGLSVHGGAGCTLPWLARLHMYLRMLGCPDAATGKIDLAE 206
            M S+V +LVE+ +G VK  ML  ++ RIK QDR MIP   LG DF S+S +ME+T+VYV+WALD PGYDRIL E STCLLSL+ L AQV HRDQ LE + D++ GR +A TRGN+RPQPPPYSALC+ QEGT LR VDGSH D HK Y   SAV+  IPRGWGLLW+GLSVHGG GCT  WLARLH++LR LGCP AATGKIDL +
Sbjct:   61 MASAVARLVEDTDGSVKSVMLKRRYTRIKGQDRLMIPLSDLGTDFGSVSGDMEDTLVYVLWALDNPGYDRILAEISTCLLSLEGLLAQVFHRDQVLEKITDQMAGRTQAGTRGNSRPQPPPYSALCAVQEGTILRIVDGSHLDVHKNYEQGSAVECQIPRGWGLLWHGLSVHGGDGCTAAWLARLHIFLRALGCPQAATGKIDLVD 266          
BLAST of mRNA_Ecto-sp13_S_contig14904.3731.1 vs. uniprot
Match: D7G5U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U5_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 1.110e-78
Identity = 113/155 (72.90%), Postives = 127/155 (81.94%), Query Frame = 0
Query:   52 MENTMVYVVWALDPPGYDRILVEKSTCLLSLDRLGAQVLHRDQNLETMNDRLEGRKRAATRGNTRPQPPPYSALCSFQEGTSLRFVDGSHFDHHKEYSAESAVDYPIPRGWGLLWYGLSVHGGAGCTLPWLARLHMYLRMLGCPDAATGKIDLAE 206
            ME T+VYV+WALD PGYDRIL E STCLLSL+ L AQVLHRDQ LE + D++ GR +AATRGN+RPQPPPYSALC+FQEGT LR VDGSH D HK Y    AV+  IPRGWGLLW+GLSVHGG GCT  WLARLH++LR LGCP AATGKIDL +
Sbjct:    1 MEETLVYVLWALDNPGYDRILAEISTCLLSLEGLLAQVLHRDQVLEKITDQMAGRTQAATRGNSRPQPPPYSALCAFQEGTILRIVDGSHLDVHKNYEQGRAVECQIPRGWGLLWHGLSVHGGDGCTAAWLARLHIFLRALGCPQAATGKIDLVD 155          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14904.3731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G604_ECTSI4.340e-9466.50Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D7G5U5_ECTSI1.110e-7872.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14904contigEcto-sp13_S_contig14904:2485..3243 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14904.3731.1mRNA_Ecto-sp13_S_contig14904.3731.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14904 2485..3405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14904.3731.1 ID=prot_Ecto-sp13_S_contig14904.3731.1|Name=mRNA_Ecto-sp13_S_contig14904.3731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MVSSVTKLVENGEGLVKKAMLTNKFNRIKSQDRYMIPPKKLGPDFLSISK
EMENTMVYVVWALDPPGYDRILVEKSTCLLSLDRLGAQVLHRDQNLETMN
DRLEGRKRAATRGNTRPQPPPYSALCSFQEGTSLRFVDGSHFDHHKEYSA
ESAVDYPIPRGWGLLWYGLSVHGGAGCTLPWLARLHMYLRMLGCPDAATG
KIDLAEASG*
back to top