prot_Ecto-sp13_S_contig1488.3715.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1488.3715.1
Unique Nameprot_Ecto-sp13_S_contig1488.3715.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length325
Homology
BLAST of mRNA_Ecto-sp13_S_contig1488.3715.1 vs. uniprot
Match: D8LJ93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ93_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 3.030e-151
Identity = 262/325 (80.62%), Postives = 269/325 (82.77%), Query Frame = 0
Query:    1 MGAAGSVGAVDPAALRKEYEAMAAKDVGDEELLNHMKKLIISPQSEAEDKPKTKEAAPNVEGTGRSSVRCSSTAASEVNSAAAGGPKARRGSGGIAASGVEGRTAGSTARRGSASRPLSHNSRLSYSSSSTQASQQSRRVSNARRSSVDGDRPLSAPQTKPPVPKQRPRSSLGEKNDGSGKPTKSRRRSYLGQPTAGQGEDAVGAAAAVAVDXXXXXXXAAPAQDEPAQD-----VQDIKTDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPAHAPPAEGPNPPPEPTMDSITIYSGSKLFWRTGLNVEMFMQQHKTANNVVQ 320
            MGAAGSVG VDP ALRKEYEAMAA+DVGDEELLNHMKKLIISP++EA DKPKTKE APNVEGT RSSVR +S  A  V+SAA  GPKARRGSGGIAASGVEG  AGSTARRG ASRPLSHNSR                     RSSVDGDRPLSAPQTKPPVPKQRPRSSLGEKNDGSGKPTKSRRRSYLGQPTAGQG  AVGAAAA    XXXXXXX APAQDE         V+D+K DSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSP HAPPAEG NPPPEPTMDSITIYSGSKLFWRT LNVEMFMQQHKTANNVVQ
Sbjct:    1 MGAAGSVGVVDPTALRKEYEAMAAQDVGDEELLNHMKKLIISPKTEAADKPKTKETAPNVEGTRRSSVRRNSGPAPGVDSAAVAGPKARRGSGGIAASGVEGGAAGSTARRGXASRPLSHNSRXXXXXXXXXXXXXXXXXXXXXRSSVDGDRPLSAPQTKPPVPKQRPRSSLGEKNDGSGKPTKSRRRSYLGQPTAGQGGVAVGAAAAXXXXXXXXXXXXAPAQDEXXXXXXXXXVEDMKIDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPVHAPPAEGSNPPPEPTMDSITIYSGSKLFWRTRLNVEMFMQQHKTANNVVQ 325          
BLAST of mRNA_Ecto-sp13_S_contig1488.3715.1 vs. uniprot
Match: A0A6H5K5G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G4_9PHAE)

HSP 1 Score: 337 bits (865), Expect = 3.550e-111
Identity = 205/327 (62.69%), Postives = 207/327 (63.30%), Query Frame = 0
Query:    1 MGAAGSVGAVDPAALRKEYEAMAAKDVGDEELLNHMKKLIISPQSEAEDKPKTKEAAPNVEGTGRSSVRCSSTAASEVNSAAAGGPKARRGSGGIAASGVEGRTAGSTARRGSASRPLSHNSRLSYSSSSTQASQQSRRVSNARRSSVDGDRPLSAPQTKPPVPKQRPRSSLGEKNDGSGKPTKSRRRSYLGQPTAGQGEDAVGAAAAVAVDXXXXXXXAAPAQDEPAQ-----DVQDIKTDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPAHAPPAEGPNPPPEPTMDSITIYSGSKLFWRTGLNVEMFMQQHKTANNVVQAS 322
            MGAAGSVG VDPA LRKEYEAMAAK+VGDEELLNHMKKLIISPQS                                                                                            RR SNARRSSVD DRPLSAPQTKPPVPKQRPRSSLGE+NDGSGKPTKSRRRSYLGQP    G DAVGAAAAVAVD       AAPAQDE        DVQDIKTDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPAHAPPAEG NPPPEPTMDSITIYSGSKLFWRT LNVEMFMQQHKTANNVV  S
Sbjct:    1 MGAAGSVGVVDPAVLRKEYEAMAAKEVGDEELLNHMKKLIISPQSGQ------------------------------------------------------------------------------------------RRASNARRSSVDSDRPLSAPQTKPPVPKQRPRSSLGEENDGSGKPTKSRRRSYLGQP----GGDAVGAAAAVAVDASAAVDGAAPAQDEXXXXXXXXDVQDIKTDSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPAHAPPAEGSNPPPEPTMDSITIYSGSKLFWRTRLNVEMFMQQHKTANNVVWVS 233          
BLAST of mRNA_Ecto-sp13_S_contig1488.3715.1 vs. uniprot
Match: A0A7S3H489_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H489_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 6.820e-6
Identity = 32/97 (32.99%), Postives = 45/97 (46.39%), Query Frame = 0
Query:  237 DSWESVSQQPSCPLCHMVFSTEGKRDQHIKYSPAHAPPAEGPNPPPEPTMDSIT---------------------IYSGSKLFWRTGLNVEMFMQQH 312
            DSW+SV+ QP C  C M F ++   D+H+K+S  HA   E          + IT                     +Y+GSK FWRT +N+E+ M  H
Sbjct:  143 DSWDSVTHQPFCTTCQMAFKSQDFLDRHVKFSDLHAKNLEKAKGVIAVDKNPITSTDAGVGMVQQSQVEGVHYKLLYTGSKFFWRTQMNIEIDMYLH 239          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1488.3715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJ93_ECTSI3.030e-15180.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5G4_9PHAE3.550e-11162.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3H489_9STRA6.820e-632.99Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1488contigEcto-sp13_S_contig1488:14156..16655 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1488.3715.1mRNA_Ecto-sp13_S_contig1488.3715.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1488 14141..16655 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1488.3715.1 ID=prot_Ecto-sp13_S_contig1488.3715.1|Name=mRNA_Ecto-sp13_S_contig1488.3715.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=325bp
MGAAGSVGAVDPAALRKEYEAMAAKDVGDEELLNHMKKLIISPQSEAEDK
PKTKEAAPNVEGTGRSSVRCSSTAASEVNSAAAGGPKARRGSGGIAASGV
EGRTAGSTARRGSASRPLSHNSRLSYSSSSTQASQQSRRVSNARRSSVDG
DRPLSAPQTKPPVPKQRPRSSLGEKNDGSGKPTKSRRRSYLGQPTAGQGE
DAVGAAAAVAVDAAAAVDGAAPAQDEPAQDVQDIKTDSWESVSQQPSCPL
CHMVFSTEGKRDQHIKYSPAHAPPAEGPNPPPEPTMDSITIYSGSKLFWR
TGLNVEMFMQQHKTANNVVQASGC*
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