prot_Ecto-sp13_S_contig14871.3707.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14871.3707.1
Unique Nameprot_Ecto-sp13_S_contig14871.3707.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length220
Homology
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Match: A0A6H5JIC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC3_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 1.290e-128
Identity = 206/220 (93.64%), Postives = 210/220 (95.45%), Query Frame = 0
Query:    1 QEDVAVSSGVGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTSTSSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAWCHAVFRREGGFEDGGLQFEHKCLAFVGLSVALYLVGHLRGASGSASWGLASEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 220
            QEDVAVSSGVGLP SDRGYEI NFRQNQETVRGEAII QYRVLVGFVSTTSSTSTSSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAG L WCHAVFRR+GGFEDGG QFEHKCLAFVGLSVALYLVG+LRGA GSASWGLASEMLRSLA AVF+VAALCMADGI RR VDDRFT+AIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH
Sbjct:  816 QEDVAVSSGVGLPSSDRGYEIFNFRQNQETVRGEAIIHQYRVLVGFVSTTSSTSTSSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGCLWWCHAVFRRQGGFEDGGPQFEHKCLAFVGLSVALYLVGNLRGAPGSASWGLASEMLRSLAAAVFLVAALCMADGISRRGVDDRFTIAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 1035          
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Match: D8LRA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA0_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 2.720e-123
Identity = 202/221 (91.40%), Postives = 209/221 (94.57%), Query Frame = 0
Query:    1 QEDVAVSSGVGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTSTSSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAWCHAVFRR-EGGFEDGGLQFEHKCLAFVGLSVALYLVGHLRGASGSASWGLASEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 220
            QEDV+VSSGVGLPLSDRGYEI NFRQNQETVRGEAIIQQYRVLVGFVSTTSSTSTSSE DFSGLTTARWTLTYETRGAGRGSGVA+ACALGLWV GWL+WCHAVFRR EGGFEDGG  FEHKCLAF GLSVALYLVG LRGA GSASWGLASEM+RSLA AVF+VAALCMADGI RR VD+RFT+AIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH
Sbjct:  570 QEDVSVSSGVGLPLSDRGYEIFNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTSTSSEADFSGLTTARWTLTYETRGAGRGSGVAMACALGLWVVGWLSWCHAVFRRREGGFEDGGPHFEHKCLAFAGLSVALYLVGSLRGAPGSASWGLASEMMRSLAAAVFLVAALCMADGIPRRSVDNRFTIAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 790          
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Match: D8LEN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN2_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 5.900e-46
Identity = 115/233 (49.36%), Postives = 146/233 (62.66%), Query Frame = 0
Query:    1 QEDVAVSSGVGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTSST------STSSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAWCHAVFRR--EGGFEDGGLQFEHKCLAFVGLSVALYL-----VGHLRGASGSASWGLASEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 220
            QED+  S+ V     +RGY + NF QNQET+RG+A+++QYRV VGFVS+T+        S S+E  FS L+ ARW+L YET      + + +A  L  WV  WLAWC  VF +  EGGF++     E K LAF+GL+VALYL     VG+   A GSASWGLASEM  S+AVAVF+V ALC+ADG+ +  V      ++  FY PKV  GV  L  MLLVDL  FP+L G D 
Sbjct:  438 QEDI--SARVRSLPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTTXXXXXXXXSGSTEEPFS-LSEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFKNA--LHERKWLAFMGLAVALYLNPIMVVGNFV-APGSASWGLASEMSLSVAVAVFLVVALCIADGVAKDRVGGGAGGSLG-FYVPKVVFGVLTLALMLLVDLTSFPTLTGMDR 663          
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Match: A0A6H5KRH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH3_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 1.400e-42
Identity = 110/224 (49.11%), Postives = 138/224 (61.61%), Query Frame = 0
Query:   10 VGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTSTS------SEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAWCHAVFRR--EGGFEDGGLQFEHKCLAFVGLSVALYL-----VGHLRGASGSASWGLASEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 220
            V LP  +RGY + NF QNQET+RG+A+++QYRV VGFVS+T            +E  FS L+ ARW+L YET      + + +A  L  WV  WLAWC  VF +  EGGF++     E K LAF+GL+VALYL     VG+   A GSASWGLASEM  S+AVAVF+V ALC+ADG+ +  V      ++  FY PKV  GV  L  MLLVDL  FP+L   D 
Sbjct:  612 VLLP-ENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTXXXXXXXXXXXXTEEPFS-LSEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFKNA--LHERKWLAFMGLAVALYLNPIMVVGNFV-APGSASWGLASEMSLSVAVAVFLVVALCIADGVGKDRVGGGAGGSLG-FYVPKVVFGVLTLALMLLVDLTSFPTLTAMDR 829          
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Match: D8LEN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN4_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 2.410e-39
Identity = 103/228 (45.18%), Postives = 136/228 (59.65%), Query Frame = 0
Query:    6 VSSGVGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTST------SSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAWCHAVFRR--EGGFEDGGLQFEHKCLAFVGLSVALYL-----VGHLRGASGSASWGLASEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 220
            +S+ V     +R Y + NF QNQ+T+RG+A+++QYRV V FVSTT+S+S+      S+E  FS +  ARW+L YET      + + +A  L  W+  WLAWC AVF R  EGGF++     E + L  +GLSV LYL     VG+   A GSASWGLASEM  S+A A+ +V  LC+ADG+ R    DR       FY  KV  GV  +  MLLVD A FP++ G D 
Sbjct:  133 ISARVRSLPENRAYALFNFHQNQDTIRGQALVRQYRVQVDFVSTTTSSSSTGDSSGSAERSFSWVREARWSLEYETGATTEWAKIILAVVLLCWLPVWLAWCWAVFYRSAEGGFKNA--LHERRWLELIGLSVVLYLNPIKVVGNFV-APGSASWGLASEMSLSVAEAMLLVVTLCIADGVGR----DRVGGGSLGFYLLKVVFGVWTMACMLLVDRASFPTVIGIDR 353          
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Match: D7G0U2_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U2_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 3.460e-31
Identity = 88/203 (43.35%), Postives = 119/203 (58.62%), Query Frame = 0
Query:    6 VSSGVGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTST------SSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAWCHAVFRR--EGGFEDGGLQFEHKCLAFVGLSVALYL-----VGHLRGASGSASWGLASEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVA 195
            +S+ V     +RGY + NF QNQ+T+ G+A+++QYRV VGFVSTT+S+S+      S+E  FS ++ A+W+L YET      +   +A  L  WV  WLAWC  VF +  E GF++     E K LA +GLSV  YL     VG+      SASWGLASEM  S+AV +F+V  LC+A G+ R  V       +  FY PK A
Sbjct:  373 ISARVRSLPENRGYTLFNFYQNQDTIWGQALVRQYRVQVGFVSTTASSSSTGGSSGSAEESFSWVSEAKWSLEYETGATTEWAKSVLAVVLMCWVPVWLAWCWTVFYKTSEKGFKNA--LHERKWLASLGLSVVFYLNPIKVVGNFAFPE-SASWGLASEMCFSVAVVMFLVVGLCIAGGVSRDWVGG----GLLGFYVPKAA 568          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JIC3_9PHAE1.290e-12893.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRA0_ECTSI2.720e-12391.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEN2_ECTSI5.900e-4649.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRH3_9PHAE1.400e-4249.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEN4_ECTSI2.410e-3945.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0U2_ECTSI3.460e-3143.35Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 217..220
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 175..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 142..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..216
NoneNo IPR availableTMHMMTMhelixcoord: 194..216
NoneNo IPR availableTMHMMTMhelixcoord: 156..174
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 122..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14871contigEcto-sp13_S_contig14871:1577..3526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14871.3707.1mRNA_Ecto-sp13_S_contig14871.3707.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14871 1575..3526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14871.3707.1 ID=prot_Ecto-sp13_S_contig14871.3707.1|Name=mRNA_Ecto-sp13_S_contig14871.3707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp
QEDVAVSSGVGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTT
SSTSTSSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAW
CHAVFRREGGFEDGGLQFEHKCLAFVGLSVALYLVGHLRGASGSASWGLA
SEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVALGVAA
LMFMLLVDLALFPSLAGWDH
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