mRNA_Ecto-sp13_S_contig14871.3707.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Match: A0A6H5JIC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC3_9PHAE) HSP 1 Score: 398 bits (1023), Expect = 1.290e-128 Identity = 206/220 (93.64%), Postives = 210/220 (95.45%), Query Frame = 1
Query: 1 QEDVAVSSGVGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTSTSSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAWCHAVFRREGGFEDGGLQFEHKCLAFVGLSVALYLVGHLRGASGSASWGLASEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 660
QEDVAVSSGVGLP SDRGYEI NFRQNQETVRGEAII QYRVLVGFVSTTSSTSTSSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAG L WCHAVFRR+GGFEDGG QFEHKCLAFVGLSVALYLVG+LRGA GSASWGLASEMLRSLA AVF+VAALCMADGI RR VDDRFT+AIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH
Sbjct: 816 QEDVAVSSGVGLPSSDRGYEIFNFRQNQETVRGEAIIHQYRVLVGFVSTTSSTSTSSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGCLWWCHAVFRRQGGFEDGGPQFEHKCLAFVGLSVALYLVGNLRGAPGSASWGLASEMLRSLAAAVFLVAALCMADGISRRGVDDRFTIAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 1035
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Match: D8LRA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA0_ECTSI) HSP 1 Score: 393 bits (1010), Expect = 2.720e-123 Identity = 202/221 (91.40%), Postives = 209/221 (94.57%), Query Frame = 1
Query: 1 QEDVAVSSGVGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTSTSSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAWCHAVFRR-EGGFEDGGLQFEHKCLAFVGLSVALYLVGHLRGASGSASWGLASEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 660
QEDV+VSSGVGLPLSDRGYEI NFRQNQETVRGEAIIQQYRVLVGFVSTTSSTSTSSE DFSGLTTARWTLTYETRGAGRGSGVA+ACALGLWV GWL+WCHAVFRR EGGFEDGG FEHKCLAF GLSVALYLVG LRGA GSASWGLASEM+RSLA AVF+VAALCMADGI RR VD+RFT+AIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH
Sbjct: 570 QEDVSVSSGVGLPLSDRGYEIFNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTSTSSEADFSGLTTARWTLTYETRGAGRGSGVAMACALGLWVVGWLSWCHAVFRRREGGFEDGGPHFEHKCLAFAGLSVALYLVGSLRGAPGSASWGLASEMMRSLAAAVFLVAALCMADGIPRRSVDNRFTIAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 790
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Match: D8LEN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN2_ECTSI) HSP 1 Score: 172 bits (437), Expect = 5.900e-46 Identity = 115/233 (49.36%), Postives = 146/233 (62.66%), Query Frame = 1
Query: 1 QEDVAVSSGVGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTSST------STSSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAWCHAVFRR--EGGFEDGGLQFEHKCLAFVGLSVALYL-----VGHLRGASGSASWGLASEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 660
QED+ S+ V +RGY + NF QNQET+RG+A+++QYRV VGFVS+T+ S S+E FS L+ ARW+L YET + + +A L WV WLAWC VF + EGGF++ E K LAF+GL+VALYL VG+ A GSASWGLASEM S+AVAVF+V ALC+ADG+ + V ++ FY PKV GV L MLLVDL FP+L G D
Sbjct: 438 QEDI--SARVRSLPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTTXXXXXXXXSGSTEEPFS-LSEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFKNA--LHERKWLAFMGLAVALYLNPIMVVGNFV-APGSASWGLASEMSLSVAVAVFLVVALCIADGVAKDRVGGGAGGSLG-FYVPKVVFGVLTLALMLLVDLTSFPTLTGMDR 663
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Match: A0A6H5KRH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH3_9PHAE) HSP 1 Score: 163 bits (412), Expect = 1.400e-42 Identity = 110/224 (49.11%), Postives = 138/224 (61.61%), Query Frame = 1
Query: 28 VGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTSTS------SEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAWCHAVFRR--EGGFEDGGLQFEHKCLAFVGLSVALYL-----VGHLRGASGSASWGLASEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 660
V LP +RGY + NF QNQET+RG+A+++QYRV VGFVS+T +E FS L+ ARW+L YET + + +A L WV WLAWC VF + EGGF++ E K LAF+GL+VALYL VG+ A GSASWGLASEM S+AVAVF+V ALC+ADG+ + V ++ FY PKV GV L MLLVDL FP+L D
Sbjct: 612 VLLP-ENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTXXXXXXXXXXXXTEEPFS-LSEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFKNA--LHERKWLAFMGLAVALYLNPIMVVGNFV-APGSASWGLASEMSLSVAVAVFLVVALCIADGVGKDRVGGGAGGSLG-FYVPKVVFGVLTLALMLLVDLTSFPTLTAMDR 829
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Match: D8LEN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN4_ECTSI) HSP 1 Score: 154 bits (388), Expect = 2.410e-39 Identity = 103/228 (45.18%), Postives = 136/228 (59.65%), Query Frame = 1
Query: 16 VSSGVGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTST------SSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAWCHAVFRR--EGGFEDGGLQFEHKCLAFVGLSVALYL-----VGHLRGASGSASWGLASEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDH 660
+S+ V +R Y + NF QNQ+T+RG+A+++QYRV V FVSTT+S+S+ S+E FS + ARW+L YET + + +A L W+ WLAWC AVF R EGGF++ E + L +GLSV LYL VG+ A GSASWGLASEM S+A A+ +V LC+ADG+ R DR FY KV GV + MLLVD A FP++ G D
Sbjct: 133 ISARVRSLPENRAYALFNFHQNQDTIRGQALVRQYRVQVDFVSTTTSSSSTGDSSGSAERSFSWVREARWSLEYETGATTEWAKIILAVVLLCWLPVWLAWCWAVFYRSAEGGFKNA--LHERRWLELIGLSVVLYLNPIKVVGNFV-APGSASWGLASEMSLSVAEAMLLVVTLCIADGVGR----DRVGGGSLGFYLLKVVFGVWTMACMLLVDRASFPTVIGIDR 353
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Match: D7G0U2_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U2_ECTSI) HSP 1 Score: 130 bits (327), Expect = 3.460e-31 Identity = 88/203 (43.35%), Postives = 119/203 (58.62%), Query Frame = 1
Query: 16 VSSGVGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTST------SSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGWLAWCHAVFRR--EGGFEDGGLQFEHKCLAFVGLSVALYL-----VGHLRGASGSASWGLASEMLRSLAVAVFMVAALCMADGILRRDVDDRFTMAIARFYAPKVA 585
+S+ V +RGY + NF QNQ+T+ G+A+++QYRV VGFVSTT+S+S+ S+E FS ++ A+W+L YET + +A L WV WLAWC VF + E GF++ E K LA +GLSV YL VG+ SASWGLASEM S+AV +F+V LC+A G+ R V + FY PK A
Sbjct: 373 ISARVRSLPENRGYTLFNFYQNQDTIWGQALVRQYRVQVGFVSTTASSSSTGGSSGSAEESFSWVSEAKWSLEYETGATTEWAKSVLAVVLMCWVPVWLAWCWTVFYKTSEKGFKNA--LHERKWLASLGLSVVFYLNPIKVVGNFAFPE-SASWGLASEMCFSVAVVMFLVVGLCIAGGVSRDWVGG----GLLGFYVPKAA 568 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14871.3707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14871.3707.1 >prot_Ecto-sp13_S_contig14871.3707.1 ID=prot_Ecto-sp13_S_contig14871.3707.1|Name=mRNA_Ecto-sp13_S_contig14871.3707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp QEDVAVSSGVGLPLSDRGYEISNFRQNQETVRGEAIIQQYRVLVGFVSTTback to top mRNA from alignment at Ecto-sp13_S_contig14871:1575..3526- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14871.3707.1 ID=mRNA_Ecto-sp13_S_contig14871.3707.1|Name=mRNA_Ecto-sp13_S_contig14871.3707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1952bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14871:1575..3526- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14871:1575..3526- >mRNA_Ecto-sp13_S_contig14871.3707.1 ID=mRNA_Ecto-sp13_S_contig14871.3707.1|Name=mRNA_Ecto-sp13_S_contig14871.3707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=660bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14871:1575..3526- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |