prot_Ecto-sp13_S_contig14843.3695.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14843.3695.1
Unique Nameprot_Ecto-sp13_S_contig14843.3695.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length121
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14843.3695.1 vs. uniprot
Match: A0A6H5L574_9PHAE (PKD_channel domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L574_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 2.510e-38
Identity = 73/77 (94.81%), Postives = 73/77 (94.81%), Query Frame = 0 
Query:   45 VTEMQELIEVTPVPARVADRLVRKIVHDWVFRSDERITGGVFQSPSSSGEYGNGTGGGNGGVRATNLRRTSSTDSSR 121
            VTEMQ LIE TPVPARVADRLVRKIVHDWVFRSDERITGG FQSPSSSGEYGNGTGGGNGGV ATNLRRTSSTDSSR
Sbjct:  210 VTEMQALIEATPVPARVADRLVRKIVHDWVFRSDERITGGSFQSPSSSGEYGNGTGGGNGGVTATNLRRTSSTDSSR 286
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BLAST of mRNA_Ecto-sp13_S_contig14843.3695.1 vs. uniprot
Match: A0A6H5JES1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES1_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 2.390e-27
Identity = 58/71 (81.69%), Postives = 61/71 (85.92%), Query Frame = 0 
Query:   51 LIEVTPVPARVADRLVRKIVHDWVFRSDERITGGVFQSPSSSGEYGNGTGGGNGGVRATNLRRTSSTDSSR 121
            LIE  PVPARVA RLVRKIVH+WVFRSDERITGGV QSPSSSGEYG+GTGGGNGGV   + RRT  TDSSR
Sbjct:  134 LIEAFPVPARVAGRLVRKIVHEWVFRSDERITGGVSQSPSSSGEYGSGTGGGNGGVTVLSTRRTYCTDSSR 204
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14843.3695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L574_9PHAE2.510e-3894.81PKD_channel domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JES1_9PHAE2.390e-2781.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14843contigEcto-sp13_S_contig14843:487..849 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14843.3695.1mRNA_Ecto-sp13_S_contig14843.3695.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14843 366..849 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14843.3695.1 ID=prot_Ecto-sp13_S_contig14843.3695.1|Name=mRNA_Ecto-sp13_S_contig14843.3695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=121bp
MPPTTYLSKPGYSTRLPTKDGSTTTSFPIAHPNHVYRAYVTRTKVTEMQE
LIEVTPVPARVADRLVRKIVHDWVFRSDERITGGVFQSPSSSGEYGNGTG
GGNGGVRATNLRRTSSTDSSR
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