prot_Ecto-sp13_S_contig14752.3632.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14752.3632.1
Unique Nameprot_Ecto-sp13_S_contig14752.3632.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length97
Homology
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A6H5J9H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H6_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 2.020e-31
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
Query:   39 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 96
            FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK
Sbjct:  224 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 281          
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: D7G1M8_ECTSI (Amino acid/peptide transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M8_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 1.030e-30
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0
Query:   39 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 96
            FYWSINLGALVSFTLVSYVCQYGL FLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK
Sbjct:   56 FYWSINLGALVSFTLVSYVCQYGLSFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 113          
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A7R9UH25_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UH25_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.560e-19
Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = 0
Query:   39 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 96
            FYWSINLGAL+S+TLV+Y+CQYG+  LGG DWGF  G+ IP ++M+LA++ F +GTPK
Sbjct:  129 FYWSINLGALISYTLVAYICQYGIAGLGGEDWGFFIGFIIPAVSMALAILAFYSGTPK 186          
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A482UWI9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UWI9_9ARCH)

HSP 1 Score: 83.2 bits (204), Expect = 1.720e-18
Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 0
Query:   38 RFYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAM 83
            RFYWSINLG+L+S+TLV+Y+CQYGLPFLGG  WGF  GY IP I M
Sbjct:   80 RFYWSINLGSLISYTLVAYICQYGLPFLGGEKWGFFVGYCIPAIMM 125          
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A7S3GU63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU63_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.930e-17
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 0
Query:   39 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 96
            FYWSINLGAL+++T+V+Y+CQYGLP LGG  WGF  GY IP I + + + VF++ T K
Sbjct:  164 FYWSINLGALLAYTIVAYICQYGLPGLGGETWGFFVGYLIPTIFLGIGIAVFMSATTK 221          
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A835YK04_9STRA (POT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK04_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.860e-17
Identity = 35/58 (60.34%), Postives = 50/58 (86.21%), Query Frame = 0
Query:   39 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 96
            FY SINLGAL+S++LV+Y+CQYG+  LGG  WGF  G++IPCIAM++A+V+F+AG+ +
Sbjct:  111 FYGSINLGALISYSLVAYICQYGVGGLGGEPWGFTVGFTIPCIAMAIAIVLFVAGSRR 168          
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A258AGE5_9GAMM (Uncharacterized protein n=1 Tax=Pseudomonadales bacterium 32-42-5 TaxID=1970543 RepID=A0A258AGE5_9GAMM)

HSP 1 Score: 77.8 bits (190), Expect = 1.310e-15
Identity = 36/54 (66.67%), Postives = 41/54 (75.93%), Query Frame = 0
Query:   38 RFYWSINLGALVSFTLVSYVCQYGL-PFLGGPDWGFMAGYSIPCIAMSLALVVF 90
            RFYWSINLGAL+S+TLV+Y+CQYG  P LGG  WGF  GY+IP I MS  L  F
Sbjct:   72 RFYWSINLGALISYTLVAYICQYGAGPDLGGEKWGFFVGYTIPSIMMSKFLFCF 125          
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: W7TJG8_9STRA (Peptide transporter ptr1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJG8_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 3.280e-7
Identity = 25/55 (45.45%), Postives = 37/55 (67.27%), Query Frame = 0
Query:   39 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAG 93
            FY +IN GAL+SFTLV  + QYG+ ++GG D+ F  G+S+  I  +  + +FL G
Sbjct:  221 FYAAINCGALISFTLVVSITQYGVSWIGGMDYRFSVGFSVAAIITTCGIAIFLFG 275          
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A8C0FLQ1_BUBBB (Solute carrier family 15 member 3 n=1 Tax=Bubo bubo TaxID=30461 RepID=A0A8C0FLQ1_BUBBB)

HSP 1 Score: 53.1 bits (126), Expect = 5.140e-6
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
Query:   39 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTP 95
            FYWSIN+GA+ S  LV++V Q         + GF+AGY IP   ++LAL++FL  TP
Sbjct:   26 FYWSINVGAIFSLLLVTFVQQ---------NIGFLAGYLIPVACLALALLIFLLATP 73          
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A8C0FCD2_BUBBB (Solute carrier family 15 member 3 n=1 Tax=Bubo bubo TaxID=30461 RepID=A0A8C0FCD2_BUBBB)

HSP 1 Score: 53.1 bits (126), Expect = 5.250e-6
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
Query:   39 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTP 95
            FYWSIN+GA+ S  LV++V Q         + GF+AGY IP   ++LAL++FL  TP
Sbjct:  156 FYWSINVGAIFSLLLVTFVQQ---------NIGFLAGYLIPVACLALALLIFLLATP 203          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5J9H6_9PHAE2.020e-31100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1M8_ECTSI1.030e-3098.28Amino acid/peptide transporter n=1 Tax=Ectocarpus ... [more]
A0A7R9UH25_9STRA1.560e-1963.79Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A482UWI9_9ARCH1.720e-1873.91Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3GU63_9STRA2.930e-1758.62Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A835YK04_9STRA5.860e-1760.34POT family-domain-containing protein n=1 Tax=Tribo... [more]
A0A258AGE5_9GAMM1.310e-1566.67Uncharacterized protein n=1 Tax=Pseudomonadales ba... [more]
W7TJG8_9STRA3.280e-745.45Peptide transporter ptr1 n=1 Tax=Nannochloropsis g... [more]
A0A8C0FLQ1_BUBBB5.140e-647.37Solute carrier family 15 member 3 n=1 Tax=Bubo bub... [more]
A0A8C0FCD2_BUBBB5.250e-647.37Solute carrier family 15 member 3 n=1 Tax=Bubo bub... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000109Proton-dependent oligopeptide transporter familyPFAMPF00854PTR2coord: 37..94
e-value: 2.4E-12
score: 46.4
NoneNo IPR availableGENE3D1.20.1250.20coord: 7..96
e-value: 1.8E-13
score: 51.4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..93
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14752contigEcto-sp13_S_contig14752:1797..2345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14752.3632.1mRNA_Ecto-sp13_S_contig14752.3632.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14752 1797..2448 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14752.3632.1 ID=prot_Ecto-sp13_S_contig14752.3632.1|Name=mRNA_Ecto-sp13_S_contig14752.3632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp
MLWFLLFSQQIHHHQQQQQQHHPHHQQQQPTTNDSACRFYWSINLGALVS
FTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000109POT_fam