mRNA_Ecto-sp13_S_contig14752.3632.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A6H5J9H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H6_9PHAE) HSP 1 Score: 125 bits (314), Expect = 7.610e-31 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 2
Query: 218 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 391
FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK
Sbjct: 224 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 281
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: D7G1M8_ECTSI (Amino acid/peptide transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M8_ECTSI) HSP 1 Score: 122 bits (306), Expect = 3.830e-30 Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 2
Query: 218 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 391
FYWSINLGALVSFTLVSYVCQYGL FLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK
Sbjct: 56 FYWSINLGALVSFTLVSYVCQYGLSFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 113
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A7R9UH25_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UH25_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 5.490e-19 Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = 2
Query: 218 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 391
FYWSINLGAL+S+TLV+Y+CQYG+ LGG DWGF G+ IP ++M+LA++ F +GTPK
Sbjct: 129 FYWSINLGALISYTLVAYICQYGIAGLGGEDWGFFIGFIIPAVSMALAILAFYSGTPK 186
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A482UWI9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UWI9_9ARCH) HSP 1 Score: 83.2 bits (204), Expect = 5.710e-18 Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 2
Query: 215 RFYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAM 352
RFYWSINLG+L+S+TLV+Y+CQYGLPFLGG WGF GY IP I M
Sbjct: 80 RFYWSINLGSLISYTLVAYICQYGLPFLGGEKWGFFVGYCIPAIMM 125
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A7S3GU63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU63_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 9.830e-17 Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 2
Query: 218 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 391
FYWSINLGAL+++T+V+Y+CQYGLP LGG WGF GY IP I + + + VF++ T K
Sbjct: 164 FYWSINLGALLAYTIVAYICQYGLPGLGGETWGFFVGYLIPTIFLGIGIAVFMSATTK 221
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A835YK04_9STRA (POT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK04_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.020e-16 Identity = 35/58 (60.34%), Postives = 50/58 (86.21%), Query Frame = 2
Query: 218 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTPK 391
FY SINLGAL+S++LV+Y+CQYG+ LGG WGF G++IPCIAM++A+V+F+AG+ +
Sbjct: 111 FYGSINLGALISYSLVAYICQYGVGGLGGEPWGFTVGFTIPCIAMAIAIVLFVAGSRR 168
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A258AGE5_9GAMM (Uncharacterized protein n=1 Tax=Pseudomonadales bacterium 32-42-5 TaxID=1970543 RepID=A0A258AGE5_9GAMM) HSP 1 Score: 77.8 bits (190), Expect = 4.270e-15 Identity = 36/54 (66.67%), Postives = 41/54 (75.93%), Query Frame = 2
Query: 215 RFYWSINLGALVSFTLVSYVCQYGL-PFLGGPDWGFMAGYSIPCIAMSLALVVF 373
RFYWSINLGAL+S+TLV+Y+CQYG P LGG WGF GY+IP I MS L F
Sbjct: 72 RFYWSINLGALISYTLVAYICQYGAGPDLGGEKWGFFVGYTIPSIMMSKFLFCF 125
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: W7TJG8_9STRA (Peptide transporter ptr1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJG8_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 1.020e-6 Identity = 25/55 (45.45%), Postives = 37/55 (67.27%), Query Frame = 2
Query: 218 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAG 382
FY +IN GAL+SFTLV + QYG+ ++GG D+ F G+S+ I + + +FL G
Sbjct: 221 FYAAINCGALISFTLVVSITQYGVSWIGGMDYRFSVGFSVAAIITTCGIAIFLFG 275
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A8C0FLQ1_BUBBB (Solute carrier family 15 member 3 n=1 Tax=Bubo bubo TaxID=30461 RepID=A0A8C0FLQ1_BUBBB) HSP 1 Score: 53.1 bits (126), Expect = 1.500e-5 Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 2
Query: 218 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTP 388
FYWSIN+GA+ S LV++V Q + GF+AGY IP ++LAL++FL TP
Sbjct: 26 FYWSINVGAIFSLLLVTFVQQ---------NIGFLAGYLIPVACLALALLIFLLATP 73
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Match: A0A8C0FCD2_BUBBB (Solute carrier family 15 member 3 n=1 Tax=Bubo bubo TaxID=30461 RepID=A0A8C0FCD2_BUBBB) HSP 1 Score: 53.1 bits (126), Expect = 1.550e-5 Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 2
Query: 218 FYWSINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCIAMSLALVVFLAGTP 388
FYWSIN+GA+ S LV++V Q + GF+AGY IP ++LAL++FL TP
Sbjct: 156 FYWSINVGAIFSLLLVTFVQQ---------NIGFLAGYLIPVACLALALLIFLLATP 203 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14752.3632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14752.3632.1 >prot_Ecto-sp13_S_contig14752.3632.1 ID=prot_Ecto-sp13_S_contig14752.3632.1|Name=mRNA_Ecto-sp13_S_contig14752.3632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp MLWFLLFSQQIHHHQQQQQQHHPHHQQQQPTTNDSACRFYWSINLGALVSback to top mRNA from alignment at Ecto-sp13_S_contig14752:1797..2448- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14752.3632.1 ID=mRNA_Ecto-sp13_S_contig14752.3632.1|Name=mRNA_Ecto-sp13_S_contig14752.3632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=652bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14752:1797..2448- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14752:1797..2448- >mRNA_Ecto-sp13_S_contig14752.3632.1 ID=mRNA_Ecto-sp13_S_contig14752.3632.1|Name=mRNA_Ecto-sp13_S_contig14752.3632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=291bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14752:1797..2448- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |