prot_Ecto-sp13_S_contig1474.3624.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1474.3624.1
Unique Nameprot_Ecto-sp13_S_contig1474.3624.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length187
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1474.3624.1 vs. uniprot
Match: D8LSS0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSS0_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 1.180e-99
Identity = 156/188 (82.98%), Postives = 158/188 (84.04%), Query Frame = 0 
Query:    1 MIQEGAGAAALERGEEGSLIAGTEPRRKGWVAPALAAVVGVALLLVCGLSAN-AREDASAAGAAATPMQASTDSVPSCSLLSCTSSGCDWDGAPFLCLDGGSAGGCXXXXXXXXXXXXXXXXXXXXXXADTLENTGVDDLPRRCLECDETQCSTLAGHPSQACGSAAPFMCLSGAATWGCADNELAWA 187
            MIQ GAGAAALERGEEGSLIAGTEPRRKGWV PALAA VGVALLL CGLSA+ AREDASAAGAAATPMQASTDSVPSCSLLSCTSSGCDWDGAPFLCLDGGSAGGC                      ADTLENTGVDDLPRRCLECDETQCS LAGHPSQACGS  PF+CLSGAATWGCADNELAWA
Sbjct:    1 MIQAGAGAAALERGEEGSLIAGTEPRRKGWVVPALAAAVGVALLLACGLSAHHAREDASAAGAAATPMQASTDSVPSCSLLSCTSSGCDWDGAPFLCLDGGSAGGCADSASTWSGGDGCTSFCDLSGCADTLENTGVDDLPRRCLECDETQCSNLAGHPSQACGSTVPFVCLSGAATWGCADNELAWA 188
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1474.3624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSS0_ECTSI1.180e-9982.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..187
NoneNo IPR availableTMHMMTMhelixcoord: 29..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1474contigEcto-sp13_S_contig1474:2..1995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1474.3624.1mRNA_Ecto-sp13_S_contig1474.3624.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1474 2..1995 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1474.3624.1 ID=prot_Ecto-sp13_S_contig1474.3624.1|Name=mRNA_Ecto-sp13_S_contig1474.3624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp
MIQEGAGAAALERGEEGSLIAGTEPRRKGWVAPALAAVVGVALLLVCGLS
ANAREDASAAGAAATPMQASTDSVPSCSLLSCTSSGCDWDGAPFLCLDGG
SAGGCADSASAWSGGDGCTSFCDLSGCADTLENTGVDDLPRRCLECDETQ
CSTLAGHPSQACGSAAPFMCLSGAATWGCADNELAWA
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