prot_Ecto-sp13_S_contig14733.3618.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14733.3618.1
Unique Nameprot_Ecto-sp13_S_contig14733.3618.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length197
Homology
BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A6H5K085_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K085_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 1.900e-125
Identity = 195/199 (97.99%), Postives = 195/199 (97.99%), Query Frame = 0
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDRQY--LFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSGWEEEEDDD 197
            GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDR Y  LFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSGWEE EDDD
Sbjct:  275 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDRNYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSGWEEAEDDD 473          
BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A7S2APL4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APL4_9STRA)

HSP 1 Score: 307 bits (787), Expect = 2.630e-93
Identity = 150/204 (73.53%), Postives = 174/204 (85.29%), Query Frame = 0
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDRQY--LFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTR-------TSGWEEEED 195
            GDN+LDVEPLE INM+LD EDD  V++WFYD +PL YSK +VNGPSY+RW+LNVP+++  YRLA QL SDLLD  Y  LF++K+FFTAKALNVA+PGGPKFEPL+RDMD DEEDWNEFNDINKIIIRHQIR+EY+V FPYLYNSRPR VHL PYH P LYY+KA+DPDLPAFYFDPVINP+SAFR+ R       TS WEE+E+
Sbjct:  521 GDNILDVEPLEAINMDLDAEDDAAVIEWFYDHRPLQYSK-FVNGPSYRRWRLNVPVMSTLYRLANQLQSDLLDNNYFHLFEQKSFFTAKALNVAIPGGPKFEPLYRDMDVDEEDWNEFNDINKIIIRHQIRTEYKVQFPYLYNSRPRKVHLMPYHSPPLYYIKADDPDLPAFYFDPVINPLSAFRTERATPSEDETSLWEEDEE 723          
BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A2P4YJN0_9STRA (Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJN0_9STRA)

HSP 1 Score: 295 bits (756), Expect = 1.210e-92
Identity = 140/189 (74.07%), Postives = 168/189 (88.89%), Query Frame = 0
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDR--QYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRT 187
            GDN+LD+EP E I MELD+EDD  V++W YDSKPL+ SK +VNGPSY++W+L VPI+AN +RLAGQLMSDL+D   +YLFDKK+FFTAKALNVA+PGGPKFEPL+RD+D D+EDWNEFNDINKIIIRHQIR+EY+VAFP+LYNSRPR+VH+ PYH P L Y+KAEDPDLPAFYFDP++NPIS FR  R+
Sbjct:  190 GDNILDIEPSESITMELDEEDDEAVIEWLYDSKPLVDSK-FVNGPSYRKWRLPVPIMANLHRLAGQLMSDLIDPNYEYLFDKKSFFTAKALNVAIPGGPKFEPLYRDLDEDDEDWNEFNDINKIIIRHQIRTEYKVAFPFLYNSRPRSVHIQPYHTPVLCYIKAEDPDLPAFYFDPIVNPISHFRVNRS 377          
BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A6A5AUD0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AUD0_9STRA)

HSP 1 Score: 301 bits (770), Expect = 7.470e-92
Identity = 143/201 (71.14%), Postives = 179/201 (89.05%), Query Frame = 0
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDR--QYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFR---STRTSGWEEEEDD 196
            GDN+LDVEP E INMELD++DD PV++W YD+KPL+   K++NGPSY++WKL VP+++N +RLAGQL+SDL+D   QYLFDK++FFTAKALNVA+PGGPKFEPL+RD+D+D+EDWNEFNDINKIIIRHQIR+EYRVAFPYLYNSRPR+VH+ PYH PAL Y+KAEDPDLPAFYFDP++NPIS FR   ++R +  +EEE++
Sbjct:   74 GDNILDVEPSEAINMELDEDDDAPVIEWLYDAKPLL-GTKFINGPSYRKWKLPVPVMSNLHRLAGQLLSDLIDPNYQYLFDKESFFTAKALNVAIPGGPKFEPLYRDLDQDDEDWNEFNDINKIIIRHQIRTEYRVAFPYLYNSRPRSVHIQPYHVPALCYVKAEDPDLPAFYFDPIVNPISQFRVAAASRATLTDEEEEE 273          
BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A024U0S5_9STRA (Pre-mRNA-processing-splicing factor 8 n=9 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024U0S5_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.460e-91
Identity = 143/199 (71.86%), Postives = 174/199 (87.44%), Query Frame = 0
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDR--QYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSGWEEEEDDD 197
            GDN+LDVEP E INMELD++DD PV++W YD+KPL+   K++NGPSY++WKL VP+++N +RLAGQL+SDL+D   QYLFDK++FFTAKALNVA+PGGPKFEPL+RD+D+D+EDWNEFNDINKIIIRHQIR+EYRVAFPYLYNSRPRAVH+ PYH PAL Y+KAEDPDLPAFYFDP++NPIS FR   T      +DD+
Sbjct:  234 GDNILDVEPSEAINMELDEDDDAPVIEWLYDAKPLL-GTKFINGPSYRKWKLPVPVMSNLHRLAGQLLSDLIDPNYQYLFDKESFFTAKALNVAIPGGPKFEPLYRDLDQDDEDWNEFNDINKIIIRHQIRTEYRVAFPYLYNSRPRAVHIQPYHVPALCYVKAEDPDLPAFYFDPIVNPISQFRVAATKSDTPADDDE 431          
BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: I2CNX7_NANGC (Pre-mRNA-processing factor 8 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CNX7_NANGC)

HSP 1 Score: 301 bits (772), Expect = 2.710e-91
Identity = 142/183 (77.60%), Postives = 165/183 (90.16%), Query Frame = 0
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDRQY--LFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISA 181
             DN+LDVEPLE INM+LD EDD PV DWFYDSKPL+Y+K  VNGPSY+ W+LNVPI AN YRLAGQL+SD LD+ Y  LFDK+AF+TAKALN+A+PGGPKFEPL+RD+D+D+EDWNEFNDI KIIIRH +R+EYRVAFP+LYNSRPR+VH+APYHHP LYY+KAEDPDLPAFYFDP+I PISA
Sbjct:  119 ADNILDVEPLEAINMDLDPEDDAPVHDWFYDSKPLLYTKH-VNGPSYRHWRLNVPIQANLYRLAGQLLSDFLDQNYFYLFDKQAFYTAKALNLAIPGGPKFEPLYRDLDKDDEDWNEFNDIGKIIIRHPLRTEYRVAFPFLYNSRPRSVHMAPYHHPMLYYIKAEDPDLPAFYFDPLITPISA 300          
BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A7S3MHY6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHY6_9STRA)

HSP 1 Score: 293 bits (749), Expect = 4.320e-91
Identity = 141/189 (74.60%), Postives = 167/189 (88.36%), Query Frame = 0
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDRQY--LFDKKAFFTAKALNVAMPGGPKFEPLFRD-MDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTR 186
             DN+LDVEPLEPI MELD EDD  V +WFYD KPL+ +K  +NG SY++W+LNVPI+AN YRLAGQLMSDLLD+ Y  LF+ K+FFTAKALN+A+PGGPKFEPLFRD +  D+EDWNEFNDINKIIIRHQ+R+EYR+AFP+LYNSRPRAVH+ PYH+P LYY+KA+DPDLPAFYFDP+INPISAFR+ R
Sbjct:  221 ADNILDVEPLEPIMMELDPEDDQAVANWFYDHKPLLDTKH-INGASYRKWRLNVPIMANLYRLAGQLMSDLLDKNYWYLFEGKSFFTAKALNLAIPGGPKFEPLFRDNIGVDDEDWNEFNDINKIIIRHQLRTEYRIAFPFLYNSRPRAVHMGPYHYPPLYYIKADDPDLPAFYFDPIINPISAFRTER 408          
BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: D0NFV2_PHYIT (Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NFV2_PHYIT)

HSP 1 Score: 298 bits (762), Expect = 6.000e-90
Identity = 145/202 (71.78%), Postives = 175/202 (86.63%), Query Frame = 0
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDR--QYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSG---WEEEEDDD 197
            GDN+LD+EP E I MELD+EDD  V++W YDSKPL+ SK +VNGPSY++W+L VPI+AN +RLAGQLMSDL+D   +YLFDKK+FFTAKALNVA+PGGPKFEPL+RD+D D+EDWNEFNDINKIIIRHQIR+EY+VAFP+LYNSRPR+VH+ PYH P L Y+KAEDPDLPAFYFDP++NPIS FR  R+      +EEEDD+
Sbjct:  157 GDNILDIEPAESITMELDEEDDEAVIEWLYDSKPLVDSK-FVNGPSYRKWRLPVPIMANLHRLAGQLMSDLIDPNYEYLFDKKSFFTAKALNVAIPGGPKFEPLYRDLDEDDEDWNEFNDINKIIIRHQIRTEYKVAFPFLYNSRPRSVHIQPYHTPVLCYIKAEDPDLPAFYFDPIVNPISHFRVNRSDKDKTIDEEEDDE 357          
BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A836C932_9STRA (NUC071 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C932_9STRA)

HSP 1 Score: 296 bits (758), Expect = 2.070e-89
Identity = 147/190 (77.37%), Postives = 165/190 (86.84%), Query Frame = 0
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDRQY--LFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTS 188
            GDN+LDVEPLEPINMELDDEDD  V DW YDS+PLMYS   VNGPSY+ W+L VPI+AN +RLAGQL+SDLLD  Y  LFDKK+FFTAKALN+A+PGGPKFEPLFRD D DEEDWNEFNDI+KI+IRHQIR+EYRVAFP+LYNSRPR V L  YH P LYY+KAEDPDLPA+YFDPV+NPISA   TR+S
Sbjct:  207 GDNILDVEPLEPINMELDDEDDAHVRDWLYDSRPLMYSHH-VNGPSYRTWRLTVPIMANLHRLAGQLISDLLDANYWYLFDKKSFFTAKALNLAIPGGPKFEPLFRDADADEEDWNEFNDISKIVIRHQIRTEYRVAFPHLYNSRPRKVQLPTYHAPPLYYIKAEDPDLPAYYFDPVVNPISA-HYTRSS 394          
BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A0W8DFT1_PHYNI (Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DFT1_PHYNI)

HSP 1 Score: 296 bits (757), Expect = 2.820e-89
Identity = 140/189 (74.07%), Postives = 168/189 (88.89%), Query Frame = 0
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDR--QYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRT 187
            GDN+LD+EP E I MELD+EDD  V++W YDSKPL+ SK +VNGPSY++W+L VPI+AN +RLAGQLMSDL+D   +YLFDKK+FFTAKALNVA+PGGPKFEPL+RD+D D+EDWNEFNDINKIIIRHQIR+EY+VAFP+LYNSRPR+VH+ PYH P L Y+KAEDPDLPAFYFDP++NPIS FR  R+
Sbjct:  194 GDNILDIEPAESITMELDEEDDEAVIEWLYDSKPLVDSK-FVNGPSYRKWRLPVPIMANLHRLAGQLMSDLIDPNYEYLFDKKSFFTAKALNVAIPGGPKFEPLYRDLDEDDEDWNEFNDINKIIIRHQIRTEYKVAFPFLYNSRPRSVHIQPYHTPVLCYIKAEDPDLPAFYFDPIVNPISHFRVNRS 381          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K085_9PHAE1.900e-12597.99MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2APL4_9STRA2.630e-9373.53Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2P4YJN0_9STRA1.210e-9274.07Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phyt... [more]
A0A6A5AUD0_9STRA7.470e-9271.14Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A024U0S5_9STRA1.460e-9171.86Pre-mRNA-processing-splicing factor 8 n=9 Tax=Sapr... [more]
I2CNX7_NANGC2.710e-9177.60Pre-mRNA-processing factor 8 n=2 Tax=Nannochlorops... [more]
A0A7S3MHY6_9STRA4.320e-9174.60Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
D0NFV2_PHYIT6.000e-9071.78Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phyt... [more]
A0A836C932_9STRA2.070e-8977.37NUC071 domain-containing protein n=1 Tax=Tribonema... [more]
A0A0W8DFT1_PHYNI2.820e-8974.07Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phyt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012591PRO8NT domainPFAMPF08082PRO8NTcoord: 2..31
e-value: 3.7E-6
score: 26.9
NoneNo IPR availablePANTHERPTHR11140:SF1coord: 2..195
NoneNo IPR availablePRODOMPD149576coord: 1..58
e-value: 3.0E-11
score: 164.0
IPR027652Pre-mRNA-processing-splicing factor 8PANTHERPTHR11140PRE-MRNA SPLICING FACTOR PRP8coord: 2..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14733contigEcto-sp13_S_contig14733:599..2409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14733.3618.1mRNA_Ecto-sp13_S_contig14733.3618.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14733 599..2409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14733.3618.1 ID=prot_Ecto-sp13_S_contig14733.3618.1|Name=mRNA_Ecto-sp13_S_contig14733.3618.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=197bp
GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRW
KLNVPILANCYRLAGQLMSDLLDRQYLFDKKAFFTAKALNVAMPGGPKFE
PLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLA
PYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSGWEEEEDDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012591PRO8NT
IPR027652PRP8