mRNA_Ecto-sp13_S_contig14733.3618.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14733.3618.1
Unique NamemRNA_Ecto-sp13_S_contig14733.3618.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A6H5K085_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K085_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 1.900e-125
Identity = 195/199 (97.99%), Postives = 195/199 (97.99%), Query Frame = 1 
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDRQY--LFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSGWEEEEDDD 591
            GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDR Y  LFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSGWEE EDDD
Sbjct:  275 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDRNYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSGWEEAEDDD 473
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BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A7S2APL4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APL4_9STRA)

HSP 1 Score: 307 bits (787), Expect = 2.630e-93
Identity = 150/204 (73.53%), Postives = 174/204 (85.29%), Query Frame = 1 
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDRQY--LFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTR-------TSGWEEEED 585
            GDN+LDVEPLE INM+LD EDD  V++WFYD +PL YSK +VNGPSY+RW+LNVP+++  YRLA QL SDLLD  Y  LF++K+FFTAKALNVA+PGGPKFEPL+RDMD DEEDWNEFNDINKIIIRHQIR+EY+V FPYLYNSRPR VHL PYH P LYY+KA+DPDLPAFYFDPVINP+SAFR+ R       TS WEE+E+
Sbjct:  521 GDNILDVEPLEAINMDLDAEDDAAVIEWFYDHRPLQYSK-FVNGPSYRRWRLNVPVMSTLYRLANQLQSDLLDNNYFHLFEQKSFFTAKALNVAIPGGPKFEPLYRDMDVDEEDWNEFNDINKIIIRHQIRTEYKVQFPYLYNSRPRKVHLMPYHSPPLYYIKADDPDLPAFYFDPVINPLSAFRTERATPSEDETSLWEEDEE 723
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BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A2P4YJN0_9STRA (Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJN0_9STRA)

HSP 1 Score: 295 bits (756), Expect = 1.210e-92
Identity = 140/189 (74.07%), Postives = 168/189 (88.89%), Query Frame = 1 
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDR--QYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRT 561
            GDN+LD+EP E I MELD+EDD  V++W YDSKPL+ SK +VNGPSY++W+L VPI+AN +RLAGQLMSDL+D   +YLFDKK+FFTAKALNVA+PGGPKFEPL+RD+D D+EDWNEFNDINKIIIRHQIR+EY+VAFP+LYNSRPR+VH+ PYH P L Y+KAEDPDLPAFYFDP++NPIS FR  R+
Sbjct:  190 GDNILDIEPSESITMELDEEDDEAVIEWLYDSKPLVDSK-FVNGPSYRKWRLPVPIMANLHRLAGQLMSDLIDPNYEYLFDKKSFFTAKALNVAIPGGPKFEPLYRDLDEDDEDWNEFNDINKIIIRHQIRTEYKVAFPFLYNSRPRSVHIQPYHTPVLCYIKAEDPDLPAFYFDPIVNPISHFRVNRS 377
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BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A6A5AUD0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AUD0_9STRA)

HSP 1 Score: 301 bits (770), Expect = 7.470e-92
Identity = 143/201 (71.14%), Postives = 179/201 (89.05%), Query Frame = 1 
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDR--QYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFR---STRTSGWEEEEDD 588
            GDN+LDVEP E INMELD++DD PV++W YD+KPL+   K++NGPSY++WKL VP+++N +RLAGQL+SDL+D   QYLFDK++FFTAKALNVA+PGGPKFEPL+RD+D+D+EDWNEFNDINKIIIRHQIR+EYRVAFPYLYNSRPR+VH+ PYH PAL Y+KAEDPDLPAFYFDP++NPIS FR   ++R +  +EEE++
Sbjct:   74 GDNILDVEPSEAINMELDEDDDAPVIEWLYDAKPLL-GTKFINGPSYRKWKLPVPVMSNLHRLAGQLLSDLIDPNYQYLFDKESFFTAKALNVAIPGGPKFEPLYRDLDQDDEDWNEFNDINKIIIRHQIRTEYRVAFPYLYNSRPRSVHIQPYHVPALCYVKAEDPDLPAFYFDPIVNPISQFRVAAASRATLTDEEEEE 273
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BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A024U0S5_9STRA (Pre-mRNA-processing-splicing factor 8 n=9 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024U0S5_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.460e-91
Identity = 143/199 (71.86%), Postives = 174/199 (87.44%), Query Frame = 1 
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDR--QYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSGWEEEEDDD 591
            GDN+LDVEP E INMELD++DD PV++W YD+KPL+   K++NGPSY++WKL VP+++N +RLAGQL+SDL+D   QYLFDK++FFTAKALNVA+PGGPKFEPL+RD+D+D+EDWNEFNDINKIIIRHQIR+EYRVAFPYLYNSRPRAVH+ PYH PAL Y+KAEDPDLPAFYFDP++NPIS FR   T      +DD+
Sbjct:  234 GDNILDVEPSEAINMELDEDDDAPVIEWLYDAKPLL-GTKFINGPSYRKWKLPVPVMSNLHRLAGQLLSDLIDPNYQYLFDKESFFTAKALNVAIPGGPKFEPLYRDLDQDDEDWNEFNDINKIIIRHQIRTEYRVAFPYLYNSRPRAVHIQPYHVPALCYVKAEDPDLPAFYFDPIVNPISQFRVAATKSDTPADDDE 431
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BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: I2CNX7_NANGC (Pre-mRNA-processing factor 8 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CNX7_NANGC)

HSP 1 Score: 301 bits (772), Expect = 2.710e-91
Identity = 142/183 (77.60%), Postives = 165/183 (90.16%), Query Frame = 1 
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDRQY--LFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISA 543
             DN+LDVEPLE INM+LD EDD PV DWFYDSKPL+Y+K  VNGPSY+ W+LNVPI AN YRLAGQL+SD LD+ Y  LFDK+AF+TAKALN+A+PGGPKFEPL+RD+D+D+EDWNEFNDI KIIIRH +R+EYRVAFP+LYNSRPR+VH+APYHHP LYY+KAEDPDLPAFYFDP+I PISA
Sbjct:  119 ADNILDVEPLEAINMDLDPEDDAPVHDWFYDSKPLLYTKH-VNGPSYRHWRLNVPIQANLYRLAGQLLSDFLDQNYFYLFDKQAFYTAKALNLAIPGGPKFEPLYRDLDKDDEDWNEFNDIGKIIIRHPLRTEYRVAFPFLYNSRPRSVHMAPYHHPMLYYIKAEDPDLPAFYFDPLITPISA 300
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BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A7S3MHY6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHY6_9STRA)

HSP 1 Score: 293 bits (749), Expect = 4.320e-91
Identity = 141/189 (74.60%), Postives = 167/189 (88.36%), Query Frame = 1 
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDRQY--LFDKKAFFTAKALNVAMPGGPKFEPLFRD-MDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTR 558
             DN+LDVEPLEPI MELD EDD  V +WFYD KPL+ +K  +NG SY++W+LNVPI+AN YRLAGQLMSDLLD+ Y  LF+ K+FFTAKALN+A+PGGPKFEPLFRD +  D+EDWNEFNDINKIIIRHQ+R+EYR+AFP+LYNSRPRAVH+ PYH+P LYY+KA+DPDLPAFYFDP+INPISAFR+ R
Sbjct:  221 ADNILDVEPLEPIMMELDPEDDQAVANWFYDHKPLLDTKH-INGASYRKWRLNVPIMANLYRLAGQLMSDLLDKNYWYLFEGKSFFTAKALNLAIPGGPKFEPLFRDNIGVDDEDWNEFNDINKIIIRHQLRTEYRIAFPFLYNSRPRAVHMGPYHYPPLYYIKADDPDLPAFYFDPIINPISAFRTER 408
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BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: D0NFV2_PHYIT (Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NFV2_PHYIT)

HSP 1 Score: 298 bits (762), Expect = 6.000e-90
Identity = 145/202 (71.78%), Postives = 175/202 (86.63%), Query Frame = 1 
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDR--QYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSG---WEEEEDDD 591
            GDN+LD+EP E I MELD+EDD  V++W YDSKPL+ SK +VNGPSY++W+L VPI+AN +RLAGQLMSDL+D   +YLFDKK+FFTAKALNVA+PGGPKFEPL+RD+D D+EDWNEFNDINKIIIRHQIR+EY+VAFP+LYNSRPR+VH+ PYH P L Y+KAEDPDLPAFYFDP++NPIS FR  R+      +EEEDD+
Sbjct:  157 GDNILDIEPAESITMELDEEDDEAVIEWLYDSKPLVDSK-FVNGPSYRKWRLPVPIMANLHRLAGQLMSDLIDPNYEYLFDKKSFFTAKALNVAIPGGPKFEPLYRDLDEDDEDWNEFNDINKIIIRHQIRTEYKVAFPFLYNSRPRSVHIQPYHTPVLCYIKAEDPDLPAFYFDPIVNPISHFRVNRSDKDKTIDEEEDDE 357
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BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A836C932_9STRA (NUC071 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C932_9STRA)

HSP 1 Score: 296 bits (758), Expect = 2.070e-89
Identity = 147/190 (77.37%), Postives = 165/190 (86.84%), Query Frame = 1 
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDRQY--LFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTS 564
            GDN+LDVEPLEPINMELDDEDD  V DW YDS+PLMYS   VNGPSY+ W+L VPI+AN +RLAGQL+SDLLD  Y  LFDKK+FFTAKALN+A+PGGPKFEPLFRD D DEEDWNEFNDI+KI+IRHQIR+EYRVAFP+LYNSRPR V L  YH P LYY+KAEDPDLPA+YFDPV+NPISA   TR+S
Sbjct:  207 GDNILDVEPLEPINMELDDEDDAHVRDWLYDSRPLMYSHH-VNGPSYRTWRLTVPIMANLHRLAGQLISDLLDANYWYLFDKKSFFTAKALNLAIPGGPKFEPLFRDADADEEDWNEFNDISKIVIRHQIRTEYRVAFPHLYNSRPRKVQLPTYHAPPLYYIKAEDPDLPAYYFDPVVNPISA-HYTRSS 394
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BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Match: A0A0W8DFT1_PHYNI (Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DFT1_PHYNI)

HSP 1 Score: 296 bits (757), Expect = 2.820e-89
Identity = 140/189 (74.07%), Postives = 168/189 (88.89%), Query Frame = 1 
Query:    1 GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRWKLNVPILANCYRLAGQLMSDLLDR--QYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRT 561
            GDN+LD+EP E I MELD+EDD  V++W YDSKPL+ SK +VNGPSY++W+L VPI+AN +RLAGQLMSDL+D   +YLFDKK+FFTAKALNVA+PGGPKFEPL+RD+D D+EDWNEFNDINKIIIRHQIR+EY+VAFP+LYNSRPR+VH+ PYH P L Y+KAEDPDLPAFYFDP++NPIS FR  R+
Sbjct:  194 GDNILDIEPAESITMELDEEDDEAVIEWLYDSKPLVDSK-FVNGPSYRKWRLPVPIMANLHRLAGQLMSDLIDPNYEYLFDKKSFFTAKALNVAIPGGPKFEPLYRDLDEDDEDWNEFNDINKIIIRHQIRTEYKVAFPFLYNSRPRSVHIQPYHTPVLCYIKAEDPDLPAFYFDPIVNPISHFRVNRS 381
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14733.3618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K085_9PHAE1.900e-12597.99MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2APL4_9STRA2.630e-9373.53Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2P4YJN0_9STRA1.210e-9274.07Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phyt... [more]
A0A6A5AUD0_9STRA7.470e-9271.14Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A024U0S5_9STRA1.460e-9171.86Pre-mRNA-processing-splicing factor 8 n=9 Tax=Sapr... [more]
I2CNX7_NANGC2.710e-9177.60Pre-mRNA-processing factor 8 n=2 Tax=Nannochlorops... [more]
A0A7S3MHY6_9STRA4.320e-9174.60Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
D0NFV2_PHYIT6.000e-9071.78Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phyt... [more]
A0A836C932_9STRA2.070e-8977.37NUC071 domain-containing protein n=1 Tax=Tribonema... [more]
A0A0W8DFT1_PHYNI2.820e-8974.07Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14733contigEcto-sp13_S_contig14733:599..2409 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score306.2
Seed ortholog evalue1.1e-80
Seed eggNOG ortholog157072.XP_008871595.1
Model size591
KEGG koko:K12856
KEGG Pathwayko03040,map03040
KEGG ModuleM00354,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000244,GO:0000375,GO:0000377,GO:0000386,GO:0000387,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005682,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0017069,GO:0017070,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0030619,GO:0030620,GO:0030623,GO:0032991,GO:0034622,GO:0034641,GO:0036002,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097157,GO:0097159,GO:0097525,GO:0120114,GO:0140098,GO:1901360,GO:1901363,GO:1902494,GO:1990904
Exons4
EggNOG free text desc.U5 snRNA binding
EggNOG OGsCOG5178@1,KOG1795@2759
Cds size591
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462786.3487287-CDS-Ecto-sp13_S_contig14733:598..6961681462786.3487287-CDS-Ecto-sp13_S_contig14733:598..696Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14733 599..696 +
1681462786.364045-CDS-Ecto-sp13_S_contig14733:1084..12071681462786.364045-CDS-Ecto-sp13_S_contig14733:1084..1207Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14733 1085..1207 +
1681462786.3750932-CDS-Ecto-sp13_S_contig14733:1569..18311681462786.3750932-CDS-Ecto-sp13_S_contig14733:1569..1831Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14733 1570..1831 +
1681462786.3878536-CDS-Ecto-sp13_S_contig14733:2301..24091681462786.3878536-CDS-Ecto-sp13_S_contig14733:2301..2409Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14733 2302..2409 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14733.3618.1prot_Ecto-sp13_S_contig14733.3618.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14733 599..2409 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14733.3618.1

>prot_Ecto-sp13_S_contig14733.3618.1 ID=prot_Ecto-sp13_S_contig14733.3618.1|Name=mRNA_Ecto-sp13_S_contig14733.3618.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=197bp
GDNVLDVEPLEPINMELDDEDDLPVLDWFYDSKPLMYSKKWVNGPSYKRW
KLNVPILANCYRLAGQLMSDLLDRQYLFDKKAFFTAKALNVAMPGGPKFE
PLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLA
PYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSGWEEEEDDD
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mRNA from alignment at Ecto-sp13_S_contig14733:599..2409+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14733.3618.1 ID=mRNA_Ecto-sp13_S_contig14733.3618.1|Name=mRNA_Ecto-sp13_S_contig14733.3618.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1811bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14733:599..2409+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCGACAACGTGCTGGATGTTGAACCCCTGGAGCCGATCAACATGGAGCT
GGATGACGAGGACGACCTTCCCGTGCTCGACTGGTTCTATGACTCCAAGT
GAGGAATTATTTCGACCAGTTAGACAGCTGTCCACTGCTGCTGATCAAGA
TATTGATTGCGACAATTTTCTCAGACGTTCCGGCGATATCAAGAAAGTTA
GAAGGAAAGCATGAATGACCCCCTGTTGTGAAGAACTCACGAATTTGGTT
GGCTGAGCTGCTGTGACGGGGTAGAATCAACCAAAGGTGTGTGCCTACCT
GGTCTCGAACAGACGTGTGTTGAATGGTGACGCACTTTTTGCTCTCACAA
GGTTTTTCTCAAACGGCAAGTACCAAACGCGTAGCTCGCGTCCCCCCCGC
CCGCCCCCTCACCCCCCGCTCCCCTCTGTTCCTTGCCTCGCCCGGGCCCC
GGTGCGGCGACCACTATGATGATGGTGATGACGCAGGCCGCTCATGTACA
GCAAGAAGTGGGTGAACGGTCCGAGCTACAAGCGGTGGAAACTGAACGTG
CCCATCCTGGCCAACTGCTACCGCTTGGCCGGGCAGCTGATGAGCGACCT
CCTCGACAGGTGGGGGGAAAGAGGGGGAAAGGAGACGTTTTTATGTTCCT
GTTTGGGGAAAGGGTTACTAAGAATTTTCCGATCGGGTTGCCATTATCAA
GGTGGTACCGTATGTGCCATGGTCATGGCCAGGTTCCATGTGTGCACCAG
CATTTCTGCACATTCCAAACAAATGCATGGATCTAACAATAAATAGAAGT
GAAGACAACGACACAAACGAAAGCAATGTGCTCCGTCGTCCTCTCGAGGA
CGCGTGGTCAATGGTCTAACCGCTAAGCCATGAAAGCATAAGAGCACCCC
CCCCCCTACCCCCCCCCCCCCCCCCCCAAACCCCCCCCCCCCCCAACACG
CGCACTCTCACCCCTCCCCAGACAATACCTCTTCGACAAGAAGGCGTTCT
TCACGGCGAAGGCCCTCAACGTCGCCATGCCCGGCGGGCCCAAGTTCGAG
CCCCTGTTCCGCGACATGGACCGCGACGAAGAGGACTGGAACGAGTTCAA
CGACATCAACAAGATCATCATCCGGCACCAGATCCGCTCCGAGTATCGGG
TGGCCTTCCCGTACCTGTACAACTCCCGCCCCCGCGCGGTGCACCTGGCG
CCGTACCACCACCCGGCCCTCTACTACCTCAAGGTCGGACTTTTGTTTTT
TTTTTAGTTTTTTTTATTGATGTGTTGTCGGTTTTGTTGTTGTTGCTGTT
GTTGTTGATGTTGCTTTCTTCACATTTGCGCCACCCGGCGGTCTACCATG
TCAATGCCGGACTTTTGTTTGAAGTCATTTTGCCACCCGGCGGTCTACCA
TTCAATGCCGGACTTTGTTTGAAGTCATTTTGTTCCGGGTTATTGTTGTT
GGTGCTGCTTTTGTTGTCTTCACATTTGTAACACCCGGCCCTCTCTTACT
CAAGGTCGGAGTTTTCCCCTGTAAGTTATACGTTTCGGGTTGCTGTTGTT
GTTGCCATCGCCGGTGTTTGTTGTTGTCTTGACCTTCAGAACCGTTACGG
TCTCCGGTCAGTATCTCATTCTGGGCGTATTTTGCCATCAGGTGCTCATC
TCTCTTGTTCTCTCTTTCTCTGGCCGTTTCGTCTTTTTTTATTCGTGTTT
CAGGCGGAGGACCCCGACCTGCCGGCGTTCTACTTCGACCCGGTGATCAA
CCCGATCAGCGCCTTCCGGTCCACGCGCACGTCCGGCTGGGAGGAAGAGG
AAGACGACGAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14733:599..2409+

>mRNA_Ecto-sp13_S_contig14733.3618.1 ID=mRNA_Ecto-sp13_S_contig14733.3618.1|Name=mRNA_Ecto-sp13_S_contig14733.3618.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=591bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14733:599..2409+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCGACAACGTGCTGGATGTTGAACCCCTGGAGCCGATCAACATGGAGCT
GGATGACGAGGACGACCTTCCCGTGCTCGACTGGTTCTATGACTCCAAGC
CGCTCATGTACAGCAAGAAGTGGGTGAACGGTCCGAGCTACAAGCGGTGG
AAACTGAACGTGCCCATCCTGGCCAACTGCTACCGCTTGGCCGGGCAGCT
GATGAGCGACCTCCTCGACAGACAATACCTCTTCGACAAGAAGGCGTTCT
TCACGGCGAAGGCCCTCAACGTCGCCATGCCCGGCGGGCCCAAGTTCGAG
CCCCTGTTCCGCGACATGGACCGCGACGAAGAGGACTGGAACGAGTTCAA
CGACATCAACAAGATCATCATCCGGCACCAGATCCGCTCCGAGTATCGGG
TGGCCTTCCCGTACCTGTACAACTCCCGCCCCCGCGCGGTGCACCTGGCG
CCGTACCACCACCCGGCCCTCTACTACCTCAAGGCGGAGGACCCCGACCT
GCCGGCGTTCTACTTCGACCCGGTGATCAACCCGATCAGCGCCTTCCGGT
CCACGCGCACGTCCGGCTGGGAGGAAGAGGAAGACGACGAC
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