prot_Ecto-sp13_S_contig14682.3582.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14682.3582.1
Unique Nameprot_Ecto-sp13_S_contig14682.3582.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length190
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14682.3582.1 vs. uniprot
Match: A0A6H5KKD9_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKD9_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.570e-30
Identity = 131/152 (86.18%), Postives = 132/152 (86.84%), Query Frame = 0 
Query:    1 SAGAGGATRGGARTVSWNVPEALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRINSRTGAELETAXXXXXXLLLSWEGLRYEIAVPRRRGSWFGKGDAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLDSVSGFAGPTRSA 152
            SAGA GATRGGARTVSWNVPEALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DRIN+RTGAELETA  XXXXLLLSWEGLRYEIAVPRR  SWFGKGDAATXXXXXXXXXXXXXXXXX             VLDSVSGFAGPTRSA
Sbjct: 1262 SAGAAGATRGGARTVSWNVPEALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDRINARTGAELETASPXXXXLLLSWEGLRYEIAVPRRSSSWFGKGDAATXXXXXXXXXXXXXXXXXGEEGRLL------VLDSVSGFAGPTRSA 1407
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14682.3582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKD9_9PHAE1.570e-3086.18ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14682contigEcto-sp13_S_contig14682:2641..3210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14682.3582.1mRNA_Ecto-sp13_S_contig14682.3582.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14682 2641..3212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14682.3582.1 ID=prot_Ecto-sp13_S_contig14682.3582.1|Name=mRNA_Ecto-sp13_S_contig14682.3582.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=190bp
SAGAGGATRGGARTVSWNVPEALGGPPPPAAAAASGSRRFLSQGGWGDSF
RRKRRSSSDRINSRTGAELETAAPPPPPLLLSWEGLRYEIAVPRRRGSWF
GKGDAATTAAPPPPPPPPPRPPAGGGGARRGEEERLLVLDSVSGFAGPTR
SAGGRRAVVVAAGGAAAAARTSGSVEAGRRSAVSASTVEG
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