prot_Ecto-sp13_S_contig1467.3574.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1467.3574.1
Unique Nameprot_Ecto-sp13_S_contig1467.3574.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1467.3574.1 vs. uniprot
Match: D7FVL6_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL6_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 8.910e-50
Identity = 96/103 (93.20%), Postives = 97/103 (94.17%), Query Frame = 0 
Query:    1 MLNKKAARGRRFSWACQQCEDESISPEAQKEATQKTNALSAVRVASTRSPGRSVTSGDIGRGKSPPWSKRGSAESRGNKTLSMSTTNAGDSNGHKLAENESGA 103
            MLNKKAARGRRFSWACQQCEDE ISPEAQKEATQK NALSAVRVASTRSPGRSVTSGDIGRGKSPPWSKRGSAESRG+ TLSMS TNAGDSNGHK AENES A
Sbjct:  815 MLNKKAARGRRFSWACQQCEDEHISPEAQKEATQKANALSAVRVASTRSPGRSVTSGDIGRGKSPPWSKRGSAESRGSNTLSMSNTNAGDSNGHKAAENESTA 917
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1467.3574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVL6_ECTSI8.910e-5093.20Hypothetical leucine rich repeat and GCG domain-co... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1467contigEcto-sp13_S_contig1467:1295..2384 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1467.3574.1mRNA_Ecto-sp13_S_contig1467.3574.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1467 1291..2384 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1467.3574.1 ID=prot_Ecto-sp13_S_contig1467.3574.1|Name=mRNA_Ecto-sp13_S_contig1467.3574.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
MLNKKAARGRRFSWACQQCEDESISPEAQKEATQKTNALSAVRVASTRSP
GRSVTSGDIGRGKSPPWSKRGSAESRGNKTLSMSTTNAGDSNGHKLAENE
SGA
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