prot_Ecto-sp13_S_contig14662.3570.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14662.3570.1
Unique Nameprot_Ecto-sp13_S_contig14662.3570.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length242
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14662.3570.1 vs. uniprot
Match: D8LIV7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIV7_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 3.700e-91
Identity = 214/229 (93.45%), Postives = 222/229 (96.94%), Query Frame = 0 
Query:   14 ARPTPLVALRLLREAQEERSLAVKELSALRLRNEHNHTRLVKVEQELKNEKEXXXXXXXXXXXXXXXXDKLERRCRSAEKEVEAQKELINSYERDTFRKPAGETWLSDHAALESALAAAKEEAKSLRRAAEGQVSALEAGRLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMAEKEAANGTGGQKRKVLHFKDNPAARAAEAAKKDTKRKLEALTEENKRLVQQV 242
            ARPTPLVALRLLREAQEERSLAVKEL+ALRLRNEHNHTRL KVEQELKNEKE    XXXXXXXXXXXXDKLERRCRS+EKEVEAQKELINSYERDTFRKPAGETWLSDHAALESALAAAKEEA+SLRRAAEGQVSALEAGRLRG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMAEKEAA+GTGGQK KVLHFKDNPAARAAEAAK++TK+KLEALTEENKRLVQQ+
Sbjct:  382 ARPTPLVALRLLREAQEERSLAVKELTALRLRNEHNHTRLAKVEQELKNEKERGESXXXXXXXXXXXXDKLERRCRSSEKEVEAQKELINSYERDTFRKPAGETWLSDHAALESALAAAKEEAESLRRAAEGQVSALEAGRLRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMAEKEAASGTGGQKGKVLHFKDNPAARAAEAAKRETKKKLEALTEENKRLVQQL 610
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14662.3570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIV7_ECTSI3.700e-9193.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 214..241
NoneNo IPR availableCOILSCoilCoilcoord: 25..45
NoneNo IPR availableCOILSCoilCoilcoord: 57..108
NoneNo IPR availableCOILSCoilCoilcoord: 122..142
NoneNo IPR availableSUPERFAMILY75704Mitotic arrest deficient-like 1, Mad1coord: 174..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14662contigEcto-sp13_S_contig14662:29..3970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14662.3570.1mRNA_Ecto-sp13_S_contig14662.3570.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14662 29..3970 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14662.3570.1 ID=prot_Ecto-sp13_S_contig14662.3570.1|Name=mRNA_Ecto-sp13_S_contig14662.3570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
GGGGGGGGGGGGGARPTPLVALRLLREAQEERSLAVKELSALRLRNEHNH
TRLVKVEQELKNEKERGESVHARAEEMELELDKLERRCRSAEKEVEAQKE
LINSYERDTFRKPAGETWLSDHAALESALAAAKEEAKSLRRAAEGQVSAL
EAGRLRGRAAKAEAALGEAIAERDQAIKAAERYGDALAMAEKEAANGTGG
QKRKVLHFKDNPAARAAEAAKKDTKRKLEALTEENKRLVQQV
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