prot_Ecto-sp13_S_contig14650.3561.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14650.3561.1
Unique Nameprot_Ecto-sp13_S_contig14650.3561.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14650.3561.1 vs. uniprot
Match: D7FPC8_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPC8_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 3.590e-49
Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0 
Query:    1 TKKWQGDRAGGAKTADPSPAAARPLDTKRMQGLLRKELSRMTAIVKQRRILLKEWFMAEDARREEVVTQHLFTRCLRSHGLWPDVGPDAVN 91
            TK WQGDR GGA TADPSPAAARPLDTKRMQGLLRKELSRMTAIVKQRRILLKEWFMAEDARREEVVTQHLFTRCLRSHGLWPDVGPDA +
Sbjct:  153 TKNWQGDRGGGANTADPSPAAARPLDTKRMQGLLRKELSRMTAIVKQRRILLKEWFMAEDARREEVVTQHLFTRCLRSHGLWPDVGPDAAD 243
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14650.3561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPC8_ECTSI3.590e-4994.51Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14650contigEcto-sp13_S_contig14650:3420..4363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14650.3561.1mRNA_Ecto-sp13_S_contig14650.3561.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14650 3420..4363 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14650.3561.1 ID=prot_Ecto-sp13_S_contig14650.3561.1|Name=mRNA_Ecto-sp13_S_contig14650.3561.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
TKKWQGDRAGGAKTADPSPAAARPLDTKRMQGLLRKELSRMTAIVKQRRI
LLKEWFMAEDARREEVVTQHLFTRCLRSHGLWPDVGPDAVN
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