prot_Ecto-sp13_S_contig14635.3555.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14635.3555.1
Unique Nameprot_Ecto-sp13_S_contig14635.3555.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
BLAST of mRNA_Ecto-sp13_S_contig14635.3555.1 vs. uniprot
Match: A0A6H5K988_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K988_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.260e-53
Identity = 89/91 (97.80%), Postives = 91/91 (100.00%), Query Frame = 0
Query:    1 IYEQLNSQGIYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK 91
            +YEQLNSQG+YCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK
Sbjct:  547 VYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK 637          
BLAST of mRNA_Ecto-sp13_S_contig14635.3555.1 vs. uniprot
Match: D8LD59_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD59_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.930e-53
Identity = 89/91 (97.80%), Postives = 91/91 (100.00%), Query Frame = 0
Query:    1 IYEQLNSQGIYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK 91
            +YEQLNSQG+YCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK
Sbjct:  619 VYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK 709          
BLAST of mRNA_Ecto-sp13_S_contig14635.3555.1 vs. uniprot
Match: A0A7S2CVW9_9STRA (RNA helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVW9_9STRA)

HSP 1 Score: 120 bits (300), Expect = 4.280e-33
Identity = 53/91 (58.24%), Postives = 69/91 (75.82%), Query Frame = 0
Query:    1 IYEQLNSQGIYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK 91
            +YE+LN  G+YC+L+TGQEK+EVPFA HV+CT+EM S    Y+VAVIDEIQM+ +  RG SWT A+LG+   EIHVCG ME   LV ++ +
Sbjct:   32 VYEELNRDGVYCTLVTGQEKKEVPFAKHVACTMEMTSISETYDVAVIDEIQMIGNSSRGHSWTRALLGVQAREIHVCGSMEAEALVRSICE 122          
BLAST of mRNA_Ecto-sp13_S_contig14635.3555.1 vs. uniprot
Match: B5Y521_PHATC (RNA helicase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y521_PHATC)

HSP 1 Score: 120 bits (302), Expect = 1.800e-31
Identity = 53/91 (58.24%), Postives = 73/91 (80.22%), Query Frame = 0
Query:    1 IYEQLNSQGIYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK 91
            IYE+L + G+YC+L TGQE+RE+PFATH + T+EMAS V++++V VIDEIQM+ D++RG +WT A+LG    EIHVCGG+E   +VE +AK
Sbjct:   63 IYEKLTAAGVYCNLYTGQERREIPFATHGAATVEMASVVDDFDVVVIDEIQMIEDQERGFAWTRALLGSRAKEIHVCGGLEAKEIVERIAK 153          
BLAST of mRNA_Ecto-sp13_S_contig14635.3555.1 vs. uniprot
Match: A0A8J2X0H6_9STRA (RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0H6_9STRA)

HSP 1 Score: 120 bits (302), Expect = 5.000e-30
Identity = 55/91 (60.44%), Postives = 70/91 (76.92%), Query Frame = 0
Query:    1 IYEQLNSQGIYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK 91
            ++E+LN  G+YCSL TGQE+REVPFATH S TIEM S    Y+VAVIDEIQ++   +RG SWT A+LGL+  EIHVCG ++ + LVE +AK
Sbjct:  103 VHERLNDAGVYCSLFTGQERREVPFATHASSTIEMVSLQERYDVAVIDEIQLIGSSERGHSWTRALLGLDAREIHVCGALDASELVEDLAK 193          
BLAST of mRNA_Ecto-sp13_S_contig14635.3555.1 vs. uniprot
Match: A0A6G0X0Y1_9STRA (RNA helicase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0Y1_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.270e-29
Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 IYEQLNSQGIYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK 91
            IYE LN  G+YCSL+TG+EKRE+P ATHVSCT+EM S+   Y+VAV+DEIQM+ D +RG +WT A+  L   EIHVCG ME   LV+  A+
Sbjct:  240 IYETLNMDGVYCSLITGEEKREIPLATHVSCTVEMCSSTTPYDVAVVDEIQMIGDPERGWAWTRALSCLQAKEIHVCGSMEAVELVKNFAQ 330          
BLAST of mRNA_Ecto-sp13_S_contig14635.3555.1 vs. uniprot
Match: A0A7S1C413_9STRA (RNA helicase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C413_9STRA)

HSP 1 Score: 113 bits (283), Expect = 6.350e-29
Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 0
Query:    1 IYEQLNSQGIYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK 91
            IYE LN  G+Y SLMTGQE+REVPFA+HVSCT+EM S     E AVIDEIQM+AD  RG SWT A+LG+   E+HVCG      +V A+ +
Sbjct:  115 IYESLNRDGVYASLMTGQERREVPFASHVSCTVEMTSVRERVECAVIDEIQMIADVGRGHSWTRALLGVQADEVHVCGDPSVIPVVRALCE 205          
BLAST of mRNA_Ecto-sp13_S_contig14635.3555.1 vs. uniprot
Match: A0A1Y1I4Y5_KLENI (RNA helicase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4Y5_KLENI)

HSP 1 Score: 117 bits (293), Expect = 1.160e-28
Identity = 55/85 (64.71%), Postives = 68/85 (80.00%), Query Frame = 0
Query:    1 IYEQLNSQGIYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVL 85
            I++ LN+ G+YC+L TGQE+R VPFA H SCT+EMA   NEYEVAVIDEIQM+AD+ RG +WT A+LGL   EIHVCG  +G+VL
Sbjct:  709 IFDTLNADGVYCNLTTGQERRTVPFANHTSCTVEMAHLGNEYEVAVIDEIQMMADDHRGWAWTRALLGLQAKEIHVCG--DGSVL 791          
BLAST of mRNA_Ecto-sp13_S_contig14635.3555.1 vs. uniprot
Match: F0YC56_AURAN (RNA helicase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC56_AURAN)

HSP 1 Score: 115 bits (289), Expect = 1.670e-28
Identity = 52/89 (58.43%), Postives = 66/89 (74.16%), Query Frame = 0
Query:    1 IYEQLNSQGIYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAM 89
            +YE+LN+ G YCSL TGQE+REVPFATH SCTIEM      ++VAV+DEIQM+    RG +WT A+ GL+  EIHVCG ++ A LVE +
Sbjct:   65 VYERLNAAGCYCSLFTGQERREVPFATHASCTIEMVPVGRRWDVAVVDEIQMIGSPDRGHAWTRALHGLDAREIHVCGALDAAALVERL 153          
BLAST of mRNA_Ecto-sp13_S_contig14635.3555.1 vs. uniprot
Match: A0A1V9YAL5_9STRA (RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAL5_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.030e-28
Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 0
Query:    1 IYEQLNSQGIYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK 91
            IYE LN  G+YCSL+TG+EKREVP +THVSCT+EM S    Y+VAV+DEIQM+ D +RG +WT A+  L   EIHVCG ME   LV   A+
Sbjct:  241 IYETLNMNGVYCSLVTGEEKREVPMSTHVSCTVEMCSAGTTYDVAVVDEIQMIGDPERGWAWTRALSCLQAKEIHVCGSMEAVDLVRKFAE 331          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14635.3555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K988_9PHAE1.260e-5397.80RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LD59_ECTSI1.930e-5397.80RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A7S2CVW9_9STRA4.280e-3358.24RNA helicase (Fragment) n=1 Tax=Dictyocha speculum... [more]
B5Y521_PHATC1.800e-3158.24RNA helicase (Fragment) n=1 Tax=Phaeodactylum tric... [more]
A0A8J2X0H6_9STRA5.000e-3060.44RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=... [more]
A0A6G0X0Y1_9STRA2.270e-2959.34RNA helicase n=1 Tax=Aphanomyces euteiches TaxID=1... [more]
A0A7S1C413_9STRA6.350e-2959.34RNA helicase (Fragment) n=1 Tax=Bicosoecida sp. CB... [more]
A0A1Y1I4Y5_KLENI1.160e-2864.71RNA helicase n=1 Tax=Klebsormidium nitens TaxID=10... [more]
F0YC56_AURAN1.670e-2858.43RNA helicase (Fragment) n=1 Tax=Aureococcus anopha... [more]
A0A1V9YAL5_9STRA2.030e-2859.34RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..91
e-value: 1.3E-23
score: 85.0
NoneNo IPR availablePANTHERPTHR12131:SF1ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIALcoord: 1..90
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 1..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14635contigEcto-sp13_S_contig14635:280..1106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14635.3555.1mRNA_Ecto-sp13_S_contig14635.3555.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14635 280..1106 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14635.3555.1 ID=prot_Ecto-sp13_S_contig14635.3555.1|Name=mRNA_Ecto-sp13_S_contig14635.3555.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
IYEQLNSQGIYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEI
QMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAK
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