prot_Ecto-sp13_S_contig14620.3549.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14620.3549.1
Unique Nameprot_Ecto-sp13_S_contig14620.3549.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length43
Homology
BLAST of mRNA_Ecto-sp13_S_contig14620.3549.1 vs. uniprot
Match: D7FVK1_ECTSI (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK1_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 4.850e-21
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 MKDQGADITCGEMALSHHLLKGNGSEWALLRRHPCEDVFGVQV 43
            MKDQGADITCGEMALSHHLLKGNGSEWALLRRHP EDVFGVQV
Sbjct:  374 MKDQGADITCGEMALSHHLLKGNGSEWALLRRHPSEDVFGVQV 416          
BLAST of mRNA_Ecto-sp13_S_contig14620.3549.1 vs. uniprot
Match: A0A7S2PN00_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PN00_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 6.710e-16
Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 MKDQGADITCGEMALSHHLLKGNGSEWALLRRHPCEDVFGVQV 43
            +K  GADITCGEMA++ +LLKG GSEWALL+RHPCEDVFGVQ+
Sbjct:  188 LKGLGADITCGEMAVAENLLKGQGSEWALLKRHPCEDVFGVQI 230          
BLAST of mRNA_Ecto-sp13_S_contig14620.3549.1 vs. uniprot
Match: A0A835ZAB5_9STRA (Dus domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAB5_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 7.240e-16
Identity = 35/43 (81.40%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MKDQGADITCGEMALSHHLLKGNGSEWALLRRHPCEDVFGVQV 43
            MKD GADITCGEMAL  +LLKG  SEWALL+RH CEDVFGVQV
Sbjct:   25 MKDLGADITCGEMALGQNLLKGQASEWALLKRHACEDVFGVQV 67          
BLAST of mRNA_Ecto-sp13_S_contig14620.3549.1 vs. uniprot
Match: A0A5J4YFM9_9CHLO (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YFM9_9CHLO)

HSP 1 Score: 75.9 bits (185), Expect = 5.970e-15
Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    2 KDQGADITCGEMALSHHLLKGNGSEWALLRRHPCEDVFGVQV 43
            K  GADITCGEMAL+ +LL+G GSEWALL+RHPCED+FGVQV
Sbjct:  533 KGLGADITCGEMALATNLLQGQGSEWALLKRHPCEDMFGVQV 574          
BLAST of mRNA_Ecto-sp13_S_contig14620.3549.1 vs. uniprot
Match: A0A2V0NJ55_9CHLO (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NJ55_9CHLO)

HSP 1 Score: 75.5 bits (184), Expect = 8.170e-15
Identity = 32/42 (76.19%), Postives = 37/42 (88.10%), Query Frame = 0
Query:    2 KDQGADITCGEMALSHHLLKGNGSEWALLRRHPCEDVFGVQV 43
            KD G DITCGEMAL+ +LL+G  SEWALL+RHPCEDVFGVQ+
Sbjct:  481 KDLGCDITCGEMALATNLLQGQASEWALLKRHPCEDVFGVQI 522          
BLAST of mRNA_Ecto-sp13_S_contig14620.3549.1 vs. uniprot
Match: A0A7S0L4D2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L4D2_9EUKA)

HSP 1 Score: 72.0 bits (175), Expect = 1.940e-14
Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    2 KDQGADITCGEMALSHHLLKGNGSEWALLRRHPCEDVFGVQV 43
            K  G DITCGEMA++ +LL+G  SEWALLRRHPCED+FGVQ+
Sbjct:   11 KAYGVDITCGEMAMATNLLQGQASEWALLRRHPCEDIFGVQL 52          
BLAST of mRNA_Ecto-sp13_S_contig14620.3549.1 vs. uniprot
Match: A0A7R9Z3C1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9Z3C1_9CHLO)

HSP 1 Score: 70.9 bits (172), Expect = 2.500e-14
Identity = 31/42 (73.81%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    2 KDQGADITCGEMALSHHLLKGNGSEWALLRRHPCEDVFGVQV 43
            K  GAD+T GEMAL+ +LL+GN SEWALL+RHPCED FGVQV
Sbjct:   27 KGLGADVTVGEMALATNLLQGNASEWALLKRHPCEDFFGVQV 68          
BLAST of mRNA_Ecto-sp13_S_contig14620.3549.1 vs. uniprot
Match: A0A0M0LS64_9EUKA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LS64_9EUKA)

HSP 1 Score: 73.9 bits (180), Expect = 2.850e-14
Identity = 32/42 (76.19%), Postives = 37/42 (88.10%), Query Frame = 0
Query:    2 KDQGADITCGEMALSHHLLKGNGSEWALLRRHPCEDVFGVQV 43
            KD G DITCGEMAL+  LL+G+ SEWALLRRHPCED+FGVQ+
Sbjct:  229 KDFGVDITCGEMALATSLLQGSPSEWALLRRHPCEDLFGVQI 270          
BLAST of mRNA_Ecto-sp13_S_contig14620.3549.1 vs. uniprot
Match: A0A2R5GXE1_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GXE1_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.890e-14
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MKDQGADITCGEMALSHHLLKGNGSEWALLRRHPCEDVFGVQV 43
            +KD GADITCGEMAL+  ++ G+GSEWALLRRH CED FGVQ+
Sbjct:  287 VKDLGADITCGEMALAKDIVSGSGSEWALLRRHKCEDFFGVQI 329          
BLAST of mRNA_Ecto-sp13_S_contig14620.3549.1 vs. uniprot
Match: A0A250X852_9CHLO (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X852_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 5.310e-14
Identity = 30/42 (71.43%), Postives = 37/42 (88.10%), Query Frame = 0
Query:    2 KDQGADITCGEMALSHHLLKGNGSEWALLRRHPCEDVFGVQV 43
            K  GADITCGEMA++ +LL+G  SEWALL+RHPCED+FGVQ+
Sbjct:  421 KGLGADITCGEMAMATNLLQGQASEWALLKRHPCEDIFGVQI 462          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14620.3549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVK1_ECTSI4.850e-2197.67tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=2 T... [more]
A0A7S2PN00_9STRA6.710e-1676.74tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
A0A835ZAB5_9STRA7.240e-1681.40Dus domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A5J4YFM9_9CHLO5.970e-1578.57tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
A0A2V0NJ55_9CHLO8.170e-1576.19tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
A0A7S0L4D2_9EUKA1.940e-1471.43Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7R9Z3C1_9CHLO2.500e-1473.81Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A0M0LS64_9EUKA2.850e-1476.19tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
A0A2R5GXE1_9STRA3.890e-1472.09tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
A0A250X852_9CHLO5.310e-1471.43tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45846FAMILY NOT NAMEDcoord: 1..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14620contigEcto-sp13_S_contig14620:394..522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14620.3549.1mRNA_Ecto-sp13_S_contig14620.3549.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14620 385..522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14620.3549.1 ID=prot_Ecto-sp13_S_contig14620.3549.1|Name=mRNA_Ecto-sp13_S_contig14620.3549.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=43bp
MKDQGADITCGEMALSHHLLKGNGSEWALLRRHPCEDVFGVQV
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