prot_Ecto-sp13_S_contig14540.3492.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14540.3492.1
Unique Nameprot_Ecto-sp13_S_contig14540.3492.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14540.3492.1 vs. uniprot
Match: A0A6H5KNQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ8_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 8.520e-22
Identity = 55/96 (57.29%), Postives = 60/96 (62.50%), Query Frame = 0 
Query:    9 RRKTDDTSWSMAGESTLDDLLLAALGATEVDPGAVLPLTDIWALQHKSETPDPMDHQRNLFFESVSRALTPRRPRTVVLGYGAGDALFTPGEMLQI 104
            RR T ++  S  G   LD + LAALGATEV  G  LPL   WALQH  E PDP DH R   +E V +A TPRRPRTVVLG GAG AL   GE L I
Sbjct:  588 RRATGESGNSPGGAPALDGVRLAALGATEVATGPELPLHVAWALQHALEPPDPTDHARLAAYEEVRQAFTPRRPRTVVLGCGAGGALLALGETLTI 683
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14540.3492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNQ8_9PHAE8.520e-2257.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14540contigEcto-sp13_S_contig14540:105..419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14540.3492.1mRNA_Ecto-sp13_S_contig14540.3492.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14540 105..1201 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14540.3492.1 ID=prot_Ecto-sp13_S_contig14540.3492.1|Name=mRNA_Ecto-sp13_S_contig14540.3492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
MDERASASRRKTDDTSWSMAGESTLDDLLLAALGATEVDPGAVLPLTDIW
ALQHKSETPDPMDHQRNLFFESVSRALTPRRPRTVVLGYGAGDALFTPGE
MLQIG
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