prot_Ecto-sp13_S_contig14523.3476.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14523.3476.1
Unique Nameprot_Ecto-sp13_S_contig14523.3476.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14523.3476.1 vs. uniprot
Match: A0A6H5K5T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T4_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.720e-19
Identity = 50/100 (50.00%), Postives = 62/100 (62.00%), Query Frame = 0 
Query:    3 EVDAPLKKMFHDEARRPAVLFYDLACRYRRHLLVRGDQFFVATFLIVDRFHFRAHRELDCAEFNSPNQQDNPFSWSMDNNNRPSFHINSSMAESNNAWLA 102
            EVDA LKK+  DE RRP + FYD A  + R+L  RGD  +VAT LIV    +   + L C+ FNSPN  DNP  W++     P F+ NSSM ESNN WL+
Sbjct:   13 EVDAVLKKIVPDEDRRPTIFFYDTAYLFDRYLSRRGDLSWVATMLIVQ---YWGRKGLLCSLFNSPNDDDNPLLWNVQEA-PPEFYWNSSMGESNNGWLS 108
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14523.3476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K5T4_9PHAE1.720e-1950.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14523contigEcto-sp13_S_contig14523:1300..2544 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14523.3476.1mRNA_Ecto-sp13_S_contig14523.3476.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14523 1002..3429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14523.3476.1 ID=prot_Ecto-sp13_S_contig14523.3476.1|Name=mRNA_Ecto-sp13_S_contig14523.3476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
MNEVDAPLKKMFHDEARRPAVLFYDLACRYRRHLLVRGDQFFVATFLIVD
RFHFRAHRELDCAEFNSPNQQDNPFSWSMDNNNRPSFHINSSMAESNNAW
LADTGTTHSS*
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