prot_Ecto-sp13_S_contig1386.3016.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1386.3016.1
Unique Nameprot_Ecto-sp13_S_contig1386.3016.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length271
Homology
BLAST of mRNA_Ecto-sp13_S_contig1386.3016.1 vs. uniprot
Match: D8LC92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC92_ECTSI)

HSP 1 Score: 530 bits (1365), Expect = 4.050e-190
Identity = 265/270 (98.15%), Postives = 265/270 (98.15%), Query Frame = 0
Query:    1 MNNCYTPLAAPAQNDGKSKRRDRDGKAPNGTATKEPSLTSTTRGDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRREARGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGCGCVHKMMEAKLKASTTKK 270
            MNNCY PLAAPAQND KSKRRDRDGKAPNGTATKEPSL STTR DGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRRE RGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGCGCVHKMMEAKLKASTTKK
Sbjct:    1 MNNCYKPLAAPAQNDAKSKRRDRDGKAPNGTATKEPSLASTTREDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRRETRGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGCGCVHKMMEAKLKASTTKK 270          
BLAST of mRNA_Ecto-sp13_S_contig1386.3016.1 vs. uniprot
Match: A0A835ZHR0_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHR0_9STRA)

HSP 1 Score: 245 bits (626), Expect = 6.400e-78
Identity = 138/275 (50.18%), Postives = 179/275 (65.09%), Query Frame = 0
Query:    1 MNNCYTPLAAPAQNDGKSKRRDRDGKAPNGTATKEPSLTSTTR------GDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRREARGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGCGCVHKMMEAKLKASTTK 269
            M NCYTP  AP                P   A +E +   ++R      GDGR   ++R+VY+D+GVV+ A+GSAY+E +HTKVICAVYGPHAQ+  D+AFSEEGQL+CD   APFA P  R E RG + D+ERELS  L+Q LE+S+++  LTK+ V V+V VL ADGG L  A TCAS+ALA+A IEL+DLV AC+      Q++LDPT +EE +  G + +A+MP S++VTQW Q GR    + A A+ELC DGC  V  MM A+L A   K
Sbjct:    1 MLNCYTPRRAP----------------PAAVAVEEQTSADSSRKRPEHRGDGRKASELRRVYLDLGVVSQASGSAYLELDHTKVICAVYGPHAQSM-DTAFSEEGQLKCDLRMAPFAQPK-RSEVRG-QTDEERELSATLQQALEASVRLDLLTKTAVDVYVTVLAADGGVLGAAITCASLALANASIELFDLVAACTAACADGQVLLDPTAQEEAAAGGSVLVAVMPSSREVTQWRQRGRLPSAQAAAAVELCMDGCAGVATMMRARLLAQVDK 256          
BLAST of mRNA_Ecto-sp13_S_contig1386.3016.1 vs. uniprot
Match: A0A7S2UZ52_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ52_9STRA)

HSP 1 Score: 235 bits (599), Expect = 2.350e-73
Identity = 128/263 (48.67%), Postives = 173/263 (65.78%), Query Frame = 0
Query:   31 TATKEPSLTSTTRGDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPG---------GRREARGGKKDD-ERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCG-TQMVLDPTK---------EEEKSG----------AGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGCGCVHKMMEAKL 263
            T  +E ++   +R DGR   +MR+V++DVG+++ A+GSAY+E N TKVIC + GPHA +  D  FSE+GQL+ D  YAPFA  G          RR+    ++ D ER+ S L+RQ LE+SIQ+H L KS++ V++ VLQADGGEL  A TCAS+AL+DAGIEL+DLV  CSVG  G ++++LDPT+         E+  SG          AGVMT+   P SQ+VTQWWQEG+FD + +A  L LC DGC  +HK+M+ KL
Sbjct:   13 TDEQERTIIKPSRADGRDDKEMRKVFIDVGILSCASGSAYIELNMTKVICTISGPHAISRADDTFSEQGQLRVDLRYAPFARVGQSQYETNDRDRRDHHPARQTDGERDASALIRQALEASIQMHLLPKSLIDVYIWVLQADGGELGAAVTCASLALSDAGIELFDLVVGCSVGCLGGSRVLLDPTEVEISQQRAPEDSSSGGARGGKQGAKAGVMTVTFTPASQEVTQWWQEGQFDQESMARGLALCIDGCLVMHKIMKEKL 275          
BLAST of mRNA_Ecto-sp13_S_contig1386.3016.1 vs. uniprot
Match: K3XAM5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAM5_GLOUD)

HSP 1 Score: 207 bits (526), Expect = 1.190e-62
Identity = 123/270 (45.56%), Postives = 168/270 (62.22%), Query Frame = 0
Query:    1 MNNCYTPL-AAPAQNDGKSKRRDRDGKAPNGTATKEPS---LTSTTRGDG-RAPYD-MRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRREARGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGCGCVHK-MMEAKL 263
            M NCY P+ A PA+  G +K +D         A  +P    L    R D  R+  D +RQ +M +GVV+ A+GSAYVEFN T+V+C+VYGP   T     FS EGQL CDF YAPFA P GRRE   G+  DE E+S++L Q L  ++ + +L K VV ++V+VL++DGGELA A  CAS+AL DA +E+YD+VTA   G   +++VLDP  +EE  G G + +A MP   +VT   Q G+ +  ++ EA++LCTD C  V K +M A L
Sbjct:    1 MQNCYFPVNAKPARAHGAAKDKD---------AAVDPIKALLEKAVRLDELRSSSDELRQAFMKLGVVSGASGSAYVEFNRTRVVCSVYGPRNDTRSRREFSNEGQLVCDFKYAPFADPVGRRER--GQDPDELEMSSILTQALSPAVMLSKLPKCVVSIYVVVLESDGGELAAAINCASLALIDAAVEMYDIVTASGAGIVNSKVVLDPCHKEEVYGDGKLLLAFMPTMGKVTYMLQAGKIEHSELQEAVDLCTDACNGVMKTLMTASL 259          
BLAST of mRNA_Ecto-sp13_S_contig1386.3016.1 vs. uniprot
Match: A0A8K1CTD4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTD4_PYTOL)

HSP 1 Score: 206 bits (523), Expect = 2.650e-62
Identity = 117/259 (45.17%), Postives = 158/259 (61.00%), Query Frame = 0
Query:    1 MNNCYTPLAAPAQNDGKSKRRDRDGKAPNGTATKEPSLTSTTRGDG-RAPYD-MRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRREARGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGCGCVHK 257
            M NCY P  A  +  G ++ +  D          +  +  T R D  RA  D MR  +M +GVV+ A GSAYVEFN T+V+C+VYGP   T     FS+EGQL CDF YAPFA   GRRE   G+ DDE E+S++L Q L  ++ + +L K VV ++V+VL++DG +LA A  CAS+AL DA +E+YD+VTA S G   +Q+VLDP  EEE  G G + +A MP   Q+T   Q G+    ++ EA++LCTD C  V K
Sbjct:    1 MQNCYFPAIAKPRGGGDAQSKQDD----------QVMIDKTLRLDRIRASADEMRPAFMRLGVVSGAAGSAYVEFNRTRVVCSVYGPRNDTRSRREFSQEGQLVCDFKYAPFADSTGRRER--GQDDDELEMSSILTQALSPAVMLAKLPKCVVSIYVVVLESDGSDLAAAINCASLALIDAAVEMYDIVTAASAGIVDSQIVLDPCHEEEVHGEGNVVMAYMPSVGQLTHMVQSGKIQHGQLQEAVDLCTDACSGVMK 247          
BLAST of mRNA_Ecto-sp13_S_contig1386.3016.1 vs. uniprot
Match: A0A2D4C421_PYTIN (Exosome complex exonuclease MTR3-like protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C421_PYTIN)

HSP 1 Score: 199 bits (507), Expect = 8.430e-60
Identity = 116/262 (44.27%), Postives = 155/262 (59.16%), Query Frame = 0
Query:    1 MNNCYTPLAAPAQNDGKSKRRDRDGKAPNGTATKEPSLTSTTRGDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRREARGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGC-GCVHKMMEA 261
            M NCY P AA A    +S   D    A      K   L    R    +  +MR  +M +GVV+ A GSAYVEF+ T+V+C+VYGP   T     FS+EGQL CDF YAPFA   GRRE   G+ DDE ELS++L Q L  ++ + +L K VV + V+VL++DGGELA A  CAS+AL DA +E+YD+VTA S     +++VLDP   EE  G G + +A MP   ++T   Q GR    ++ EA++LCT  C G +  M+ A
Sbjct:    1 MQNCYFPXAAVAPE--RSSSTDATSDAQRALIDKTLRLDRVRR----SADEMRPTFMKLGVVSGAAGSAYVEFHRTRVVCSVYGPRNDTRSRREFSQEGQLVCDFKYAPFADASGRRER--GQDDDELELSSILTQALSPAVMLSKLPKCVVSIFVVVLESDGGELAAAINCASLALVDAAVEMYDVVTAASAAVVDSRVVLDPCAAEETRGDGKVVLAYMPTLGRLTHTLQSGRLQHAQLQEAVDLCTXACTGLMKNMLTA 254          
BLAST of mRNA_Ecto-sp13_S_contig1386.3016.1 vs. uniprot
Match: D0NP71_PHYIT (Exosome complex exonuclease MTR3-like protein n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NP71_PHYIT)

HSP 1 Score: 194 bits (493), Expect = 6.880e-58
Identity = 112/270 (41.48%), Postives = 155/270 (57.41%), Query Frame = 0
Query:    1 MNNCYTPL------AAPAQNDGKSKRRDRDGKAPNGTATKEPSLTSTTRGDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRREARGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGC-GCVHKMMEAKL 263
            M NCY PL      AAP  +D   +R D+                S T  D     +MR+ +M +G V+ A GSAYVE   T+V+CAVYGP   T     FS++GQL CD  YAPFA    RRE   G+  DE ELS ++ + L  ++ +H+L K ++ V V +L+ DGG LA A  CAS+ALADA +E+YD+VTA S G     +VLDP++EEE+ G G + +A MP   +VT   Q G+    ++ EA++LCTD C G +  ++ A L
Sbjct:    1 MQNCYYPLPVQPQLAAPKDDDAPMERLDK----------------SRTSSD-----EMRRPFMQLGAVSGAAGSAYVELGRTRVLCAVYGPRTDTRARREFSKDGQLVCDVKYAPFADKLTRRER--GQDPDEMELSAIVEEALAPAVMLHKLPKCIISVFVTILEDDGGVLAAALNCASLALADAAVEMYDVVTASSAGIVNGSVVLDPSREEEQRGDGKLALAYMPSMGRVTYMLQAGKIHHTQLQEAVDLCTDACTGVIRSLLTASL 247          
BLAST of mRNA_Ecto-sp13_S_contig1386.3016.1 vs. uniprot
Match: L8HCU8_ACACA (3' exoribonuclease family, domain 1 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HCU8_ACACA)

HSP 1 Score: 189 bits (481), Expect = 8.440e-56
Identity = 102/226 (45.13%), Postives = 145/226 (64.16%), Query Frame = 0
Query:   45 DGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRREARGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGCGCVHKMMEAKLKASTTKK 270
            DGR+P + R V++  GV++ A GSAY+E N TKVIC VYGP  QT   + +SE+G+L C F  A FA  G RR+    K  +E+ELS L+ Q LE S+++    KS + V V+VL+  GG +  A T AS+ALADAGIE+YDLV +CSVG   + ++LDP+  EEK+    + +A+MP + ++TQ  Q G  +  K  EA+ELC DGC  +++MM   L  +  +K
Sbjct:   41 DGRSPDEFRPVFLKTGVISQAAGSAYIEMNQTKVICGVYGPR-QTP-KTVYSEKGKLNCFFKLATFAENGERRKYVSDK--EEKELSMLMVQALEVSLRLETFPKSELDVFVLVLEESGGMVGAAITAASLALADAGIEMYDLVASCSVGVVDSHILLDPSIAEEKAAQSNLMVAIMPSANEITQMLQTGEIEHTKAPEAIELCLDGCSKIYQMMRQNLLETAAQK 262          
BLAST of mRNA_Ecto-sp13_S_contig1386.3016.1 vs. uniprot
Match: A0A5D6XTG5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTG5_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.320e-55
Identity = 110/271 (40.59%), Postives = 158/271 (58.30%), Query Frame = 0
Query:    1 MNNCYTPLAAPAQNDGKSKRRDRDGKAPNGTATKEPSLTSTTRGDG-RAPYD-MRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRREARGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGC-GCVHKMMEAKLKASTT 268
            M NCY P+AA A               P+        L S  R DG RA  D +R  ++ +GVV+ A GSAYVE   T+V+C+ +GP   T     FS +GQL CD  +APFA   GRRE    +  DE ELS +L Q L  ++ +H+L K V+ ++V+VL++DGGELA A  CAS+AL DA +E+YD+VTA + G    ++VLDP ++E+  G G + +A MP + +VT   Q G+    ++ EA++LCTD C G +  ++ A L  + T
Sbjct:    1 MQNCYFPVAAAA---------------PDARDPVRALLESARRLDGARASSDELRAAFLQLGVVSGAAGSAYVELGRTRVVCSAFGPRNDTRSRREFSNQGQLVCDVKFAPFADRVGRRER--AQDADELELSAVLAQALAPAVMLHKLPKCVMSLYVVVLESDGGELAAAINCASLALVDAAVEMYDIVTAAAAGVVNGKVVLDPCQQEQLHGDGHVVLAYMPTADKVTYMLQAGKIQHAQLQEAVDLCTDACTGVMKTLVTASLLQAAT 254          
BLAST of mRNA_Ecto-sp13_S_contig1386.3016.1 vs. uniprot
Match: H3GV34_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GV34_PHYRM)

HSP 1 Score: 188 bits (477), Expect = 1.760e-55
Identity = 98/214 (45.79%), Postives = 136/214 (63.55%), Query Frame = 0
Query:   51 DMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRREARGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGC-GCVHKMMEAKL 263
            +MR+ +M +G V+ A GSAYVE   T+V+CAVYGP   T     FS++GQL CD  YAPFA    RRE   G+  DE ELS ++ + L  ++ +H+L K V+ + V VL+ DGG  A A  CAS+ALADA +E+YD+VTA S G   + +VLDP++EEE+ G G M +A MP   +VT   Q G+    ++ EA++LCTD C G    ++ A L
Sbjct:   36 EMRRSFMQLGAVSGAAGSAYVELGRTRVVCAVYGPRTDTRARREFSKDGQLVCDVKYAPFADKWTRRER--GQDPDEMELSAIVEEALAPAVMLHKLPKCVLSLFVTVLEDDGGVFAAAINCASLALADAAVEMYDVVTAASAGIVNSTVVLDPSREEEQRGDGKMALAYMPSMGRVTYMLQAGKVHHTQLQEAVDLCTDACTGVTRTLLTASL 247          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1386.3016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC92_ECTSI4.050e-19098.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZHR0_9STRA6.400e-7850.18Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A7S2UZ52_9STRA2.350e-7348.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3XAM5_GLOUD1.190e-6245.56Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1CTD4_PYTOL2.650e-6245.17Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C421_PYTIN8.430e-6044.27Exosome complex exonuclease MTR3-like protein n=2 ... [more]
D0NP71_PHYIT6.880e-5841.48Exosome complex exonuclease MTR3-like protein n=16... [more]
L8HCU8_ACACA8.440e-5645.133' exoribonuclease family, domain 1 domain contain... [more]
A0A5D6XTG5_9STRA1.320e-5540.59Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
H3GV34_PHYRM1.760e-5545.79Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 32..270
e-value: 1.1E-71
score: 243.0
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 186..249
e-value: 2.0E-10
score: 40.6
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 52..183
e-value: 2.8E-30
score: 105.5
NoneNo IPR availablePANTHERPTHR11953:SF2EXOSOME COMPLEX COMPONENT MTR3coord: 37..265
NoneNo IPR availablePANTHERPTHR11953EXOSOME COMPLEX COMPONENTcoord: 37..265
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 38..209
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 184..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1386contigEcto-sp13_S_contig1386:6893..8864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1386.3016.1mRNA_Ecto-sp13_S_contig1386.3016.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1386 6497..8867 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1386.3016.1 ID=prot_Ecto-sp13_S_contig1386.3016.1|Name=mRNA_Ecto-sp13_S_contig1386.3016.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=271bp
MNNCYTPLAAPAQNDGKSKRRDRDGKAPNGTATKEPSLTSTTRGDGRAPY
DMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQ
LQCDFSYAPFAMPGGRREARGGKKDDERELSTLLRQTLESSIQVHRLTKS
VVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQM
VLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTD
GCGCVHKMMEAKLKASTTKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR015847ExoRNase_PH_dom2
IPR001247ExoRNase_PH_dom1
IPR020568Ribosomal_S5_D2-typ_fold
IPR036345ExoRNase_PH_dom2_sf