prot_Ecto-sp13_S_contig13753.2949.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13753.2949.1
Unique Nameprot_Ecto-sp13_S_contig13753.2949.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length107
Homology
BLAST of mRNA_Ecto-sp13_S_contig13753.2949.1 vs. uniprot
Match: D8LIH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH2_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 1.020e-60
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
Query:    1 AAFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 105
            AAFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV
Sbjct:  405 AAFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 509          
BLAST of mRNA_Ecto-sp13_S_contig13753.2949.1 vs. uniprot
Match: A0A6H5LCN5_9PHAE (Utp12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCN5_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 5.290e-59
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0
Query:    1 AAFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 105
            AAFGATGSVCATGGDDSKVKLWST+SGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV
Sbjct:  399 AAFGATGSVCATGGDDSKVKLWSTSSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 503          
BLAST of mRNA_Ecto-sp13_S_contig13753.2949.1 vs. uniprot
Match: A0A7S2WEL1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WEL1_9STRA)

HSP 1 Score: 153 bits (387), Expect = 4.450e-41
Identity = 73/104 (70.19%), Postives = 88/104 (84.62%), Query Frame = 0
Query:    2 AFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 105
            A+   G + ATGGDD+KVKLWSTT+GFCFVTF+EHEAP+TA+ F  + +AV+SAS+DGTVRA DLVRY+NFRT+V P P Q TSLA+DG GEVV AGAMDPFE+
Sbjct:  385 AYSPDGQLVATGGDDAKVKLWSTTTGFCFVTFSEHEAPITALSFIGDGNAVISASMDGTVRAFDLVRYRNFRTMVAPTPVQFTSLAIDGEGEVVCAGAMDPFEI 488          
BLAST of mRNA_Ecto-sp13_S_contig13753.2949.1 vs. uniprot
Match: A0A2R5GPN5_9STRA (Guanine nucleotide-binding protein subunit beta-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPN5_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.860e-39
Identity = 76/106 (71.70%), Postives = 90/106 (84.91%), Query Frame = 0
Query:    1 AAFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNA-SAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 105
            AA+   G + ATGGDD+KVKLWSTTSGFCFVTF+EHEAPVTA+ F  +A +AVVSASLDG+VRA DLVRY+NFRT+VTP P QLT LA+DG GE+V AGAMDP ++
Sbjct:  373 AAYSPDGQLVATGGDDAKVKLWSTTSGFCFVTFSEHEAPVTALSFVGDAGNAVVSASLDGSVRAFDLVRYRNFRTMVTPTPTQLTCLAVDGQGEIVCAGAMDPPDI 478          
BLAST of mRNA_Ecto-sp13_S_contig13753.2949.1 vs. uniprot
Match: A0A2P4WX09_9STRA (Periodic tryptophan protein 2 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WX09_9STRA)

HSP 1 Score: 144 bits (364), Expect = 7.790e-39
Identity = 72/105 (68.57%), Postives = 83/105 (79.05%), Query Frame = 0
Query:    1 AAFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 105
            A++   G + ATG DD+K+KLW T SGFC+VTFTEH APVTAV+F P+  AVVSASLDGTVRA DL RYKNFR L TP+P Q  SLALD SG+VV AG+MDPF V
Sbjct:   94 ASYSPDGRLLATGADDAKLKLWDTNSGFCYVTFTEHSAPVTAVQFVPSGQAVVSASLDGTVRAFDLNRYKNFRVLTTPEPTQFLSLALDPSGQVVCAGSMDPFNV 198          
BLAST of mRNA_Ecto-sp13_S_contig13753.2949.1 vs. uniprot
Match: H3GD86_PHYRM (Utp12 domain-containing protein n=30 Tax=Peronosporaceae TaxID=4777 RepID=H3GD86_PHYRM)

HSP 1 Score: 146 bits (369), Expect = 1.200e-38
Identity = 73/105 (69.52%), Postives = 84/105 (80.00%), Query Frame = 0
Query:    1 AAFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 105
            A++   G + ATG DD+K+KLW T SGFC+VTFTEH APVTAV+FTP+  AVVSASLDGTVRA DL RYKNFR L TP+P Q  SLALD SG+VV AG+MDPF V
Sbjct:  385 ASYSPDGRLLATGADDAKLKLWDTNSGFCYVTFTEHSAPVTAVQFTPSGQAVVSASLDGTVRAFDLNRYKNFRVLTTPEPTQFLSLALDPSGQVVCAGSMDPFNV 489          
BLAST of mRNA_Ecto-sp13_S_contig13753.2949.1 vs. uniprot
Match: A0A2D4BGV4_PYTIN (Periodic tryptophan protein 2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGV4_PYTIN)

HSP 1 Score: 146 bits (368), Expect = 1.580e-38
Identity = 72/104 (69.23%), Postives = 81/104 (77.88%), Query Frame = 0
Query:    2 AFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 105
            A+   G + ATG DD+K+KLW TTSGFC+VTFTEH APVT V FTPN  AVVSASLDGTVRA DL RYKNFR L TP+P Q  SLALD SG++V AG MDPF +
Sbjct:  351 AYSPDGRLLATGADDAKLKLWDTTSGFCYVTFTEHSAPVTGVAFTPNGQAVVSASLDGTVRAFDLNRYKNFRVLTTPEPVQFISLALDPSGQLVCAGTMDPFNI 454          
BLAST of mRNA_Ecto-sp13_S_contig13753.2949.1 vs. uniprot
Match: W7T6B9_9STRA (Small nucleolar ribonucleoprotein complex subunit (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6B9_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.310e-38
Identity = 72/104 (69.23%), Postives = 84/104 (80.77%), Query Frame = 0
Query:    2 AFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 105
            A+   G V ATGG+D+KVKLWST SGF FVTFT H+APVTA+ F  +  AV+SASLDGTVRAHDL+RY+NFRTL TP P QL SLA+D SGEVV AG+ +PFEV
Sbjct:  396 AYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEV 499          
BLAST of mRNA_Ecto-sp13_S_contig13753.2949.1 vs. uniprot
Match: A0A3R7K0K3_9STRA (Utp12 domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K0K3_9STRA)

HSP 1 Score: 144 bits (364), Expect = 5.660e-38
Identity = 72/105 (68.57%), Postives = 83/105 (79.05%), Query Frame = 0
Query:    1 AAFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 105
            A++   G + ATG DD+K+KLW T SGFC+VTFTEH APVTAV+F P+  AVVSASLDGTVRA DL RYKNFR L TP+P Q  SLALD SG+VV AG+MDPF V
Sbjct:  370 ASYSPDGRLLATGADDAKLKLWDTNSGFCYVTFTEHSAPVTAVQFVPSGQAVVSASLDGTVRAFDLNRYKNFRVLTTPEPVQFLSLALDPSGQVVCAGSMDPFNV 474          
BLAST of mRNA_Ecto-sp13_S_contig13753.2949.1 vs. uniprot
Match: A0A8K1CJB2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJB2_PYTOL)

HSP 1 Score: 144 bits (363), Expect = 7.740e-38
Identity = 68/99 (68.69%), Postives = 80/99 (80.81%), Query Frame = 0
Query:    7 GSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 105
            G + ATG DD+K+KLW TTSGFC+VTF EH+APVT V+FTPN  AVVSASLDGTVRA DL RYKNFR + TP+P Q  SLALD SG++V AG +DPF +
Sbjct:  367 GRIIATGADDAKLKLWDTTSGFCYVTFNEHQAPVTGVKFTPNGQAVVSASLDGTVRAFDLNRYKNFRVMTTPEPVQFISLALDLSGQIVCAGTLDPFNI 465          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13753.2949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIH2_ECTSI1.020e-60100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCN5_9PHAE5.290e-5999.05Utp12 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2WEL1_9STRA4.450e-4170.19Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A2R5GPN5_9STRA1.860e-3971.70Guanine nucleotide-binding protein subunit beta-1 ... [more]
A0A2P4WX09_9STRA7.790e-3968.57Periodic tryptophan protein 2 (Fragment) n=1 Tax=P... [more]
H3GD86_PHYRM1.200e-3869.52Utp12 domain-containing protein n=30 Tax=Peronospo... [more]
A0A2D4BGV4_PYTIN1.580e-3869.23Periodic tryptophan protein 2 n=1 Tax=Pythium insi... [more]
W7T6B9_9STRA4.310e-3869.23Small nucleolar ribonucleoprotein complex subunit ... [more]
A0A3R7K0K3_9STRA5.660e-3868.57Utp12 domain-containing protein n=2 Tax=Phytophtho... [more]
A0A8K1CJB2_PYTOL7.740e-3868.69Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 26..65
e-value: 2.4E-6
score: 37.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 29..62
e-value: 2.3E-4
score: 21.9
coord: 6..23
e-value: 0.27
score: 12.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 33..74
score: 11.244
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..32
score: 9.339
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..105
e-value: 4.1E-24
score: 86.9
IPR027145Periodic tryptophan protein 2PANTHERPTHR19858WD40 REPEAT PROTEINcoord: 2..105
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..106
score: 17.614
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13753contigEcto-sp13_S_contig13753:4..1341 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13753.2949.1mRNA_Ecto-sp13_S_contig13753.2949.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13753 4..1341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13753.2949.1 ID=prot_Ecto-sp13_S_contig13753.2949.1|Name=mRNA_Ecto-sp13_S_contig13753.2949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=107bp
AAFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNAS
AVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAM
DPFEVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR027145PWP2
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf