prot_Ecto-sp13_S_contig1351.2794.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1351.2794.1
Unique Nameprot_Ecto-sp13_S_contig1351.2794.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length263
Homology
BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 3.000e-78
Identity = 153/195 (78.46%), Postives = 164/195 (84.10%), Query Frame = 0
Query:   61 RALYGIIYKYSGSPDKKAPRDGSAYLLEHEALVAREASNGSHGEEVAVKILTIEKAINFLRRLCGYSEWIMGRMAKA-------AAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVA-RIGVKI 247
            R+ +G   +      +K+PRD SAYL+EHEALVAREASNGS+GE VAVKI+TI KAINFLR LCG SEWI G MAKA       AAQAT LEYGNTTSLRAVVESCSALT +RLVHLMLG  +LKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVI RHNVMGIV+GVIKTSAILQDEA DVA RIGVKI
Sbjct: 1263 RSTWGSRRRSPRRTGRKSPRDRSAYLVEHEALVAREASNGSNGE-VAVKIVTIGKAINFLRHLCGNSEWITGPMAKASSLALLAAAQATTLEYGNTTSLRAVVESCSALTKSRLVHLMLGPYRLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVICRHNVMGIVEGVIKTSAILQDEAGDVAIRIGVKI 1456          
BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: D7G6W1_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W1_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 5.100e-74
Identity = 134/145 (92.41%), Postives = 138/145 (95.17%), Query Frame = 0
Query:  104 EEVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY 248
            +EVAVKILTI KAINFLRRLCG SEWIMG MAKAAAQAT LEYGNT SLRAVVESCSALTNARLVHLMLG  +LKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIV+GVIKTSAILQDEAEDVARIGVKI+
Sbjct:  481 QEVAVKILTIGKAINFLRRLCGDSEWIMGPMAKAAAQATTLEYGNTISLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVEGVIKTSAILQDEAEDVARIGVKIF 625          
BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: D7G6W3_ECTSI (Spindle pole body component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W3_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 2.540e-58
Identity = 102/112 (91.07%), Postives = 106/112 (94.64%), Query Frame = 0
Query:  137 AAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY 248
            AAAQAT LEYGNTTS  AVVESCSALT+ARLVHLMLG  +LKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIV+G IKTSAILQDEAEDVARIGVKI+
Sbjct:   11 AAAQATTLEYGNTTSPTAVVESCSALTDARLVHLMLGPYRLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVEGAIKTSAILQDEAEDVARIGVKIF 122          
BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: A0A2D4C6X9_PYTIN (Spindle pole body component n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6X9_PYTIN)

HSP 1 Score: 100 bits (248), Expect = 3.550e-20
Identity = 60/182 (32.97%), Postives = 100/182 (54.95%), Query Frame = 0
Query:   79 PRDGSAYLLEHEALVAREASNGSHGEEVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQAT------RLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY-VSDGD 253
            PR     L  H+  +  E        E+A +IL I K+INF+R+ CG+SEW++     A+  AT       + +   +SL A++E  SA TN  L+  +     L  H R L++++L GQGD +  L+++L PEL K+AT ++RH +M +++  +  S    + A+ +AR+ V++   S GD
Sbjct:  380 PRVADDRLWTHKYQLNTEMLPSFISTELANRILVIGKSINFIRQCCGHSEWLLDARHHASVNATVDFEDNGVRFAQLSSLEAMIEQVSASTNEFLIRTLTDKYSLLDHCRALRRYMLLGQGDFIQYLMDLLRPELSKRATQVHRHTLMNVLETALNASNAKFESADILARLDVQLLRASSGD 561          
BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: A0A1V9YEE9_9STRA (Spindle pole body component n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEE9_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 7.260e-19
Identity = 52/151 (34.44%), Postives = 91/151 (60.26%), Query Frame = 0
Query:  104 EEVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY-VSDGD 253
            +E+A  I  I K+INF+R  CG +EW++    +   +   L + +    +A ++  +  TNA ++ ++L   QL  H R LK++LL GQGD +  L+++LGPEL K+AT +YRHN+M +++  +  S    + A+ + R+ VK++  + GD
Sbjct:  383 KELAHTIFIIGKSINFIRTCCGDTEWVL----ETELEEDTLTFDHWMEFQAWIDRAARETNAYVIKILLDKYQLLDHCRALKQYLLLGQGDFIQYLMDLLGPELSKRATQLYRHNLMNVLETALNASNAKYESADILGRLDVKLHQAASGD 529          
BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: A0A485LJW3_9STRA (Spindle pole body component n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJW3_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 3.350e-18
Identity = 70/232 (30.17%), Postives = 116/232 (50.00%), Query Frame = 0
Query:   22 ALYSGRDNALEHFCIFVVPYTRYL-----HCIFRLPQRARLDGGRALYGIIYKYSGSPDKKAPRDGSAYLLEHEALVAREASNGSHGEEVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY 248
            AL SG    +EH   FV  +   L       I ++ Q+  L+G  +L  +  ++  + D+     G   L  H+  +           EVA  I  + K+INF+R  CG SEW+M     A  +   L + +    +  + + +  TN  +  L+LG  QL  H R LK++LL GQGD +  L+++L PEL K+AT +YRHN+M +++  +  S    +  + +AR+ VK++
Sbjct:  337 ALASGIHKYMEHGDPFVRQFIETLLNQVATPILKMIQQWTLEG--SLEDLHEEFFVACDQSV---GDDQLWRHKYSLRWSMLPQFISREVANTIFVMGKSINFIRTCCGDSEWVMD----AQLRTDNLTFDHWMEFQQWITAAAKETNGYVTKLLLGKYQLLEHCRALKQYLLLGQGDFIQYLMDLLQPELSKRATQVYRHNLMNVLETALNASNAKYETNDILARLDVKLH 559          
BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: W4G2J4_9STRA (Spindle pole body component n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2J4_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 9.970e-18
Identity = 51/144 (35.42%), Postives = 85/144 (59.03%), Query Frame = 0
Query:  105 EVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY 248
            +VA  I  + K+INF+R  CG SEW++     A    T L + + T  +  + + +  TN  +  ++LG  QL  H R LK++LL GQGD +  L+++L PEL K+AT IYRHN+M +++  +  S    +  + ++R+ VK++
Sbjct:  201 DVAHTIFVMGKSINFIRTCCGDSEWVLDTQLHA----TNLTFDHWTEFQQWIAAAANETNNYVTKILLGKYQLLEHCRALKQYLLLGQGDFIQYLMDLLQPELSKRATQIYRHNLMSVLETALNASNAKFESNDILSRLDVKLH 340          
BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: W4G4C6_9STRA (Spindle pole body component n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4C6_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.020e-17
Identity = 51/144 (35.42%), Postives = 85/144 (59.03%), Query Frame = 0
Query:  105 EVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY 248
            +VA  I  + K+INF+R  CG SEW++     A    T L + + T  +  + + +  TN  +  ++LG  QL  H R LK++LL GQGD +  L+++L PEL K+AT IYRHN+M +++  +  S    +  + ++R+ VK++
Sbjct:  412 DVAHTIFVMGKSINFIRTCCGDSEWVLDTQLHA----TNLTFDHWTEFQQWIAAAANETNNYVTKILLGKYQLLEHCRALKQYLLLGQGDFIQYLMDLLQPELSKRATQIYRHNLMSVLETALNASNAKFESNDILSRLDVKLH 551          
BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: W4G2F7_9STRA (Spindle pole body component n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2F7_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.120e-17
Identity = 51/144 (35.42%), Postives = 85/144 (59.03%), Query Frame = 0
Query:  105 EVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY 248
            +VA  I  + K+INF+R  CG SEW++     A    T L + + T  +  + + +  TN  +  ++LG  QL  H R LK++LL GQGD +  L+++L PEL K+AT IYRHN+M +++  +  S    +  + ++R+ VK++
Sbjct:  412 DVAHTIFVMGKSINFIRTCCGDSEWVLDTQLHA----TNLTFDHWTEFQQWIAAAANETNNYVTKILLGKYQLLEHCRALKQYLLLGQGDFIQYLMDLLQPELSKRATQIYRHNLMSVLETALNASNAKFESNDILSRLDVKLH 551          
BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: K3WEA1_GLOUD (Spindle pole body component n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEA1_GLOUD)

HSP 1 Score: 92.4 bits (228), Expect = 1.610e-17
Identity = 55/155 (35.48%), Postives = 88/155 (56.77%), Query Frame = 0
Query:  105 EVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLE-----YGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY-VSDGD 253
            ++A KIL I K+INF+R+ CG ++WIM       +  T  E     +    +L  ++E  S  TN  L+  +    QL  H R LK++LL GQGD +  L+++LGPEL K+AT IYRH +  +++  + +S    +  + +AR+ V++   S GD
Sbjct:  576 DLATKILVIGKSINFIRQCCGNTDWIMDAGQDLMSGTTDDEDDGVHFAELINLEIMIEKVSKTTNEYLIRTLNEKYQLVDHCRALKRYLLLGQGDFIQYLMDLLGPELSKRATQIYRHTLTNVLETALNSSNAKFETTDILARLDVELLQASTGD 730          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G720_ECTSI3.000e-7878.46NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G6W1_ECTSI5.100e-7492.41Spindle pole body component n=2 Tax=Ectocarpus Tax... [more]
D7G6W3_ECTSI2.540e-5891.07Spindle pole body component n=1 Tax=Ectocarpus sil... [more]
A0A2D4C6X9_PYTIN3.550e-2032.97Spindle pole body component n=1 Tax=Pythium insidi... [more]
A0A1V9YEE9_9STRA7.260e-1934.44Spindle pole body component n=1 Tax=Achlya hypogyn... [more]
A0A485LJW3_9STRA3.350e-1830.17Spindle pole body component n=1 Tax=Aphanomyces st... [more]
W4G2J4_9STRA9.970e-1835.42Spindle pole body component n=1 Tax=Aphanomyces as... [more]
W4G4C6_9STRA1.020e-1735.42Spindle pole body component n=1 Tax=Aphanomyces as... [more]
W4G2F7_9STRA1.120e-1735.42Spindle pole body component n=4 Tax=Aphanomyces as... [more]
K3WEA1_GLOUD1.610e-1735.48Spindle pole body component n=1 Tax=Globisporangiu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042241Gamma-tubulin complex, C-terminal domain superfamilyGENE3D1.20.120.1900coord: 177..253
e-value: 1.6E-5
score: 26.2
IPR041470Gamma tubulin complex component protein, N-terminalPFAMPF17681GCP_N_terminalcoord: 104..172
e-value: 4.1E-7
score: 29.9
IPR040457Gamma tubulin complex component, C-terminalPFAMPF04130GCP_C_terminalcoord: 177..240
e-value: 8.0E-11
score: 42.0
NoneNo IPR availablePANTHERPTHR19302:SF14GAMMA-TUBULIN COMPLEX COMPONENT 3coord: 105..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..262
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.575
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 105..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1351contigEcto-sp13_S_contig1351:7783..10541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1351.2794.1mRNA_Ecto-sp13_S_contig1351.2794.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1351 6713..10575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1351.2794.1 ID=prot_Ecto-sp13_S_contig1351.2794.1|Name=mRNA_Ecto-sp13_S_contig1351.2794.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=263bp
MAMMNRQGLFLASLFARGACFALYSGRDNALEHFCIFVVPYTRYLHCIFR
LPQRARLDGGRALYGIIYKYSGSPDKKAPRDGSAYLLEHEALVAREASNG
SHGEEVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTT
SLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLI
EVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIYVS
DGDGMPFRSSTM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042241GCP_C_sf
IPR041470GCP_N
IPR040457GCP_C
IPR007259GCP