mRNA_Ecto-sp13_S_contig1351.2794.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1351.2794.1
Unique NamemRNA_Ecto-sp13_S_contig1351.2794.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 2.110e-75
Identity = 161/219 (73.52%), Postives = 172/219 (78.54%), Query Frame = 3 
Query:  891 RALYGIIYKYSGSPDKKAPRDGSAYLLEHEALVAREASNGSHGEEVAVKILTIEKAINFLRRLCGYSEWIMGRMAKA-------AAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVA-RIGVKIYVSDGDGMPFRSSTM*ALPS-RPW 1520
            R+ +G   +      +K+PRD SAYL+EHEALVAREASNGS+GE VAVKI+TI KAINFLR LCG SEWI G MAKA       AAQAT LEYGNTTSLRAVVESCSALT +RLVHLMLG  +LKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVI RHNVMGIV+GVIKTSAILQDEA DVA RIGVKI      G  F    M A PS R W
Sbjct: 1263 RSTWGSRRRSPRRTGRKSPRDRSAYLVEHEALVAREASNGSNGE-VAVKIVTIGKAINFLRHLCGNSEWITGPMAKASSLALLAAAQATTLEYGNTTSLRAVVESCSALTKSRLVHLMLGPYRLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVICRHNVMGIVEGVIKTSAILQDEAGDVAIRIGVKIST----GYDFVRVAMPASPSLRGW 1476
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BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: D7G6W1_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W1_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 1.290e-70
Identity = 134/145 (92.41%), Postives = 138/145 (95.17%), Query Frame = 3 
Query: 1020 EEVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY 1454
            +EVAVKILTI KAINFLRRLCG SEWIMG MAKAAAQAT LEYGNT SLRAVVESCSALTNARLVHLMLG  +LKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIV+GVIKTSAILQDEAEDVARIGVKI+
Sbjct:  481 QEVAVKILTIGKAINFLRRLCGDSEWIMGPMAKAAAQATTLEYGNTISLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVEGVIKTSAILQDEAEDVARIGVKIF 625
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BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: D7G6W3_ECTSI (Spindle pole body component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W3_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 2.280e-55
Identity = 102/112 (91.07%), Postives = 106/112 (94.64%), Query Frame = 3 
Query: 1119 AAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY 1454
            AAAQAT LEYGNTTS  AVVESCSALT+ARLVHLMLG  +LKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIV+G IKTSAILQDEAEDVARIGVKI+
Sbjct:   11 AAAQATTLEYGNTTSPTAVVESCSALTDARLVHLMLGPYRLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVEGAIKTSAILQDEAEDVARIGVKIF 122
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BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: A0A2D4C6X9_PYTIN (Spindle pole body component n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6X9_PYTIN)

HSP 1 Score: 100 bits (248), Expect = 1.700e-18
Identity = 60/182 (32.97%), Postives = 100/182 (54.95%), Query Frame = 3 
Query:  945 PRDGSAYLLEHEALVAREASNGSHGEEVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQAT------RLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY-VSDGD 1469
            PR     L  H+  +  E        E+A +IL I K+INF+R+ CG+SEW++     A+  AT       + +   +SL A++E  SA TN  L+  +     L  H R L++++L GQGD +  L+++L PEL K+AT ++RH +M +++  +  S    + A+ +AR+ V++   S GD
Sbjct:  380 PRVADDRLWTHKYQLNTEMLPSFISTELANRILVIGKSINFIRQCCGHSEWLLDARHHASVNATVDFEDNGVRFAQLSSLEAMIEQVSASTNEFLIRTLTDKYSLLDHCRALRRYMLLGQGDFIQYLMDLLRPELSKRATQVHRHTLMNVLETALNASNAKFESADILARLDVQLLRASSGD 561
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BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: A0A1V9YEE9_9STRA (Spindle pole body component n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEE9_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.810e-17
Identity = 52/151 (34.44%), Postives = 91/151 (60.26%), Query Frame = 3 
Query: 1020 EEVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY-VSDGD 1469
            +E+A  I  I K+INF+R  CG +EW++    +   +   L + +    +A ++  +  TNA ++ ++L   QL  H R LK++LL GQGD +  L+++LGPEL K+AT +YRHN+M +++  +  S    + A+ + R+ VK++  + GD
Sbjct:  383 KELAHTIFIIGKSINFIRTCCGDTEWVL----ETELEEDTLTFDHWMEFQAWIDRAARETNAYVIKILLDKYQLLDHCRALKQYLLLGQGDFIQYLMDLLGPELSKRATQLYRHNLMNVLETALNASNAKYESADILGRLDVKLHQAASGD 529
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BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: A0A485LJW3_9STRA (Spindle pole body component n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJW3_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.200e-16
Identity = 70/232 (30.17%), Postives = 116/232 (50.00%), Query Frame = 3 
Query:  774 ALYSGRDNALEHFCIFVVPYTRYL-----HCIFRLPQRARLDGGRALYGIIYKYSGSPDKKAPRDGSAYLLEHEALVAREASNGSHGEEVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY 1454
            AL SG    +EH   FV  +   L       I ++ Q+  L+G  +L  +  ++  + D+     G   L  H+  +           EVA  I  + K+INF+R  CG SEW+M     A  +   L + +    +  + + +  TN  +  L+LG  QL  H R LK++LL GQGD +  L+++L PEL K+AT +YRHN+M +++  +  S    +  + +AR+ VK++
Sbjct:  337 ALASGIHKYMEHGDPFVRQFIETLLNQVATPILKMIQQWTLEG--SLEDLHEEFFVACDQSV---GDDQLWRHKYSLRWSMLPQFISREVANTIFVMGKSINFIRTCCGDSEWVMD----AQLRTDNLTFDHWMEFQQWITAAAKETNGYVTKLLLGKYQLLEHCRALKQYLLLGQGDFIQYLMDLLQPELSKRATQVYRHNLMNVLETALNASNAKYETNDILARLDVKLH 559
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BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: W4G2J4_9STRA (Spindle pole body component n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2J4_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.780e-16
Identity = 51/144 (35.42%), Postives = 85/144 (59.03%), Query Frame = 3 
Query: 1023 EVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY 1454
            +VA  I  + K+INF+R  CG SEW++     A    T L + + T  +  + + +  TN  +  ++LG  QL  H R LK++LL GQGD +  L+++L PEL K+AT IYRHN+M +++  +  S    +  + ++R+ VK++
Sbjct:  201 DVAHTIFVMGKSINFIRTCCGDSEWVLDTQLHA----TNLTFDHWTEFQQWIAAAANETNNYVTKILLGKYQLLEHCRALKQYLLLGQGDFIQYLMDLLQPELSKRATQIYRHNLMSVLETALNASNAKFESNDILSRLDVKLH 340
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BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: W4G4C6_9STRA (Spindle pole body component n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4C6_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.940e-16
Identity = 51/144 (35.42%), Postives = 85/144 (59.03%), Query Frame = 3 
Query: 1023 EVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY 1454
            +VA  I  + K+INF+R  CG SEW++     A    T L + + T  +  + + +  TN  +  ++LG  QL  H R LK++LL GQGD +  L+++L PEL K+AT IYRHN+M +++  +  S    +  + ++R+ VK++
Sbjct:  412 DVAHTIFVMGKSINFIRTCCGDSEWVLDTQLHA----TNLTFDHWTEFQQWIAAAANETNNYVTKILLGKYQLLEHCRALKQYLLLGQGDFIQYLMDLLQPELSKRATQIYRHNLMSVLETALNASNAKFESNDILSRLDVKLH 551
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BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: W4G2F7_9STRA (Spindle pole body component n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2F7_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 3.720e-16
Identity = 51/144 (35.42%), Postives = 85/144 (59.03%), Query Frame = 3 
Query: 1023 EVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY 1454
            +VA  I  + K+INF+R  CG SEW++     A    T L + + T  +  + + +  TN  +  ++LG  QL  H R LK++LL GQGD +  L+++L PEL K+AT IYRHN+M +++  +  S    +  + ++R+ VK++
Sbjct:  412 DVAHTIFVMGKSINFIRTCCGDSEWVLDTQLHA----TNLTFDHWTEFQQWIAAAANETNNYVTKILLGKYQLLEHCRALKQYLLLGQGDFIQYLMDLLQPELSKRATQIYRHNLMSVLETALNASNAKFESNDILSRLDVKLH 551
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BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Match: K3WEA1_GLOUD (Spindle pole body component n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEA1_GLOUD)

HSP 1 Score: 92.4 bits (228), Expect = 5.600e-16
Identity = 55/155 (35.48%), Postives = 88/155 (56.77%), Query Frame = 3 
Query: 1023 EVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLE-----YGNTTSLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIY-VSDGD 1469
            ++A KIL I K+INF+R+ CG ++WIM       +  T  E     +    +L  ++E  S  TN  L+  +    QL  H R LK++LL GQGD +  L+++LGPEL K+AT IYRH +  +++  + +S    +  + +AR+ V++   S GD
Sbjct:  576 DLATKILVIGKSINFIRQCCGNTDWIMDAGQDLMSGTTDDEDDGVHFAELINLEIMIEKVSKTTNEYLIRTLNEKYQLVDHCRALKRYLLLGQGDFIQYLMDLLGPELSKRATQIYRHTLTNVLETALNSSNAKFETTDILARLDVELLQASTGD 730
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1351.2794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G720_ECTSI2.110e-7573.52NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G6W1_ECTSI1.290e-7092.41Spindle pole body component n=2 Tax=Ectocarpus Tax... [more]
D7G6W3_ECTSI2.280e-5591.07Spindle pole body component n=1 Tax=Ectocarpus sil... [more]
A0A2D4C6X9_PYTIN1.700e-1832.97Spindle pole body component n=1 Tax=Pythium insidi... [more]
A0A1V9YEE9_9STRA2.810e-1734.44Spindle pole body component n=1 Tax=Achlya hypogyn... [more]
A0A485LJW3_9STRA1.200e-1630.17Spindle pole body component n=1 Tax=Aphanomyces st... [more]
W4G2J4_9STRA2.780e-1635.42Spindle pole body component n=1 Tax=Aphanomyces as... [more]
W4G4C6_9STRA2.940e-1635.42Spindle pole body component n=1 Tax=Aphanomyces as... [more]
W4G2F7_9STRA3.720e-1635.42Spindle pole body component n=4 Tax=Aphanomyces as... [more]
K3WEA1_GLOUD5.600e-1635.48Spindle pole body component n=1 Tax=Globisporangiu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1351contigEcto-sp13_S_contig1351:6713..10575 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score267.3
Seed ortholog evalue7.5e-69
Seed eggNOG ortholog2880.D7G720
Preferred nameTUBGCP3
Model size1533
KEGG koko:K10407,ko:K16570
KEGG Pathwayko05132,map05132
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000278,GO:0000280,GO:0000922,GO:0000923,GO:0000928,GO:0000930,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005816,GO:0005819,GO:0005822,GO:0005824,GO:0005825,GO:0005827,GO:0005829,GO:0005856,GO:0005874,GO:0005875,GO:0005876,GO:0005881,GO:0005886,GO:0005938,GO:0006996,GO:0007010,GO:0007017,GO:0007020,GO:0007049,GO:0007051,GO:0007052,GO:0007098,GO:0007140,GO:0007163,GO:0007276,GO:0007338,GO:0008017,GO:0008092,GO:0008150,GO:0008275,GO:0008360,GO:0009566,GO:0009605,GO:0009607,GO:0009624,GO:0009898,GO:0009987,GO:0010638,GO:0010968,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0030863,GO:0030981,GO:0031023,GO:0031109,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031122,GO:0031334,GO:0031967,GO:0031975,GO:0032153,GO:0032155,GO:0032271,GO:0032273,GO:0032501,GO:0032504,GO:0032886,GO:0032991,GO:0033043,GO:0034622,GO:0043015,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044450,GO:0044459,GO:0044464,GO:0044703,GO:0044732,GO:0046785,GO:0048232,GO:0048285,GO:0048518,GO:0048522,GO:0048609,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051225,GO:0051258,GO:0051298,GO:0051321,GO:0051415,GO:0051418,GO:0051493,GO:0051495,GO:0051704,GO:0051707,GO:0055028,GO:0061496,GO:0061497,GO:0065003,GO:0065007,GO:0065008,GO:0070507,GO:0070925,GO:0071840,GO:0071944,GO:0071957,GO:0071963,GO:0090063,GO:0090307,GO:0097435,GO:0098552,GO:0098562,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0140013,GO:0140014,GO:1902850,GO:1902903,GO:1902905,GO:1903046,GO:1903047
Exons7
EggNOG free text desc.microtubule nucleation by interphase microtubule organizing center
EggNOG OGsCOG0457@1,KOG1840@2759,KOG2000@1,KOG2000@2759,KOG4658@1,KOG4658@2759
Ec32 ortholog descriptionGamma-tubulin complex component protein
Ec32 orthologEc-01_012010.2
Cds size789
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03036,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1351.2794.1prot_Ecto-sp13_S_contig1351.2794.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1351 7783..10541 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462721.8295307-UTR-Ecto-sp13_S_contig1351:6712..71181681462721.8295307-UTR-Ecto-sp13_S_contig1351:6712..7118Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1351 6713..7118 +
1681462721.8394406-UTR-Ecto-sp13_S_contig1351:7357..74801681462721.8394406-UTR-Ecto-sp13_S_contig1351:7357..7480Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1351 7358..7480 +
1681462721.8471992-UTR-Ecto-sp13_S_contig1351:7601..77821681462721.8471992-UTR-Ecto-sp13_S_contig1351:7601..7782Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1351 7602..7782 +
1681462721.9031522-UTR-Ecto-sp13_S_contig1351:10541..105751681462721.9031522-UTR-Ecto-sp13_S_contig1351:10541..10575Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1351 10542..10575 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462721.8553848-CDS-Ecto-sp13_S_contig1351:7782..80941681462721.8553848-CDS-Ecto-sp13_S_contig1351:7782..8094Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1351 7783..8094 +
1681462721.8648098-CDS-Ecto-sp13_S_contig1351:8333..84291681462721.8648098-CDS-Ecto-sp13_S_contig1351:8333..8429Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1351 8334..8429 +
1681462721.8744159-CDS-Ecto-sp13_S_contig1351:9085..92531681462721.8744159-CDS-Ecto-sp13_S_contig1351:9085..9253Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1351 9086..9253 +
1681462721.8842115-CDS-Ecto-sp13_S_contig1351:9727..99051681462721.8842115-CDS-Ecto-sp13_S_contig1351:9727..9905Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1351 9728..9905 +
1681462721.8930295-CDS-Ecto-sp13_S_contig1351:10506..105411681462721.8930295-CDS-Ecto-sp13_S_contig1351:10506..10541Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1351 10507..10541 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1351.2794.1

>prot_Ecto-sp13_S_contig1351.2794.1 ID=prot_Ecto-sp13_S_contig1351.2794.1|Name=mRNA_Ecto-sp13_S_contig1351.2794.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=263bp
MAMMNRQGLFLASLFARGACFALYSGRDNALEHFCIFVVPYTRYLHCIFR
LPQRARLDGGRALYGIIYKYSGSPDKKAPRDGSAYLLEHEALVAREASNG
SHGEEVAVKILTIEKAINFLRRLCGYSEWIMGRMAKAAAQATRLEYGNTT
SLRAVVESCSALTNARLVHLMLGASQLKSHLRVLKKFLLHGQGDLMLTLI
EVLGPELDKKATVIYRHNVMGIVKGVIKTSAILQDEAEDVARIGVKIYVS
DGDGMPFRSSTM*
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mRNA from alignment at Ecto-sp13_S_contig1351:6713..10575+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1351.2794.1 ID=mRNA_Ecto-sp13_S_contig1351.2794.1|Name=mRNA_Ecto-sp13_S_contig1351.2794.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3863bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1351:6713..10575+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCGTCGTCGTACTTGCCCTGCATAGCAAGGAGTGGGTTACGTGAGGAAG
CGCTTCACCAGGATCTGAACCGATACATCGACACGGAAAAACCTACGAAA
ATTCCTGGAAAAATCTGGTGGCTCTCACCTGTTCTCTCAACAACCCCGCC
CCAGTTGTTGTTGAGCCAAATAATACTTCAAACGATGTTCTAGAGGTTTC
CACGCGGAGAATGTTGCTCCGCATTTTTAGACTCGACGTGTGCTGAAACA
CGACCCTGCCACGCCGTCGACTGTATTCCAGGGGAGGTATGAGGAGCCGA
GCCGCTGTATGAGCGGTCACAGGGTATATTCGAAAAGGCCGTTGGTTTGG
ATCGCCCGGATGTGGCCACGGTGCTCCACAATCGGGCGGGGGTGTTGATA
GCCCAGGTGAGCACCGAAATAGCTTTCCGGGATTGTTTTGTGGCGTCCTC
AGGACGATTTTGGAGAAGAAGGCTAGACGCTCCATTGTCTTACCGTGAAC
TGGCTGAAGCCAGCGGGCGTAGTGGACGAAAGGTGACATCAGGTGCCAAT
GACTTGGACGAAAATAGTAAATCGCGGCAGTTGTTAAACCGTTTGCGCAT
CCAATTTGGTCCTCAACCCTGCGTGTCAATCTCAATTGCCCGCAGGAGAA
GCACAAGGAGGCATTTCCACTACTGGAGAGGGCCCTCACAATCCGTACGA
AGAAGCTTGGAGAGAACCACCCGGACACGGTTGGGACTCGGAATTGCCTG
GAATTTGTGCGAGGGAAGGTCCGTGCACACTTGGGGCCGTCTTGTAGGCA
AGCCTCATGCACGACGATCGCGCCAAGGCCTGGCACTACAATACAACTGA
GAAAACTATGGTCTGGTCTATGTACTTCGTGTGCTGCAGGTGTGAGGACG
AGGTGGAAGAAACTGGCTGCGTTAGCAGTCACTGCCGACGCGAAGAAGAA
GACAGGGGAGAAGCTGGCATTGGCAAATTGCGTCAACTGTAACCTGGCGC
TATATATCTGGCTCACGTTCACGGCGGCTGCTTATGGTGTAGAACAATTC
TTGCAAAGCTCGTGTTGTTGATGGCGATGATGAACCGTCAAGGGTTGTTT
TTGGCCTCTCTTTTTGCGAGAGGCGCTTGTTTTGCGCTGTACTCTGGGCG
TGACAATGCTCTCGAGCATTTTTGTATTTTTGTCGTACCATACACTCGGT
ATCTCCATTGTATATTTCGCCTTCCTCAAAGAGCAAGGCTAGACGGAGGA
CGAGCATTGTACGGTATTATATACAAGTACTCGGGATCCCCGGACAAAAA
GGCCCCGCGGGACGGGTCGGCGTATCTCCTGGAGCACGAAGCATTGGTGG
CGCGAGAGGCCTCCAATGGATCCCATGGAGAGGTGAGGAGCCGAGCACGA
GGTTGGGGGTAGTCCTACTTGCTCCTCATTTATTTGCTGTCGCGGACGTG
TCATGTCCGAGAATGATGGAACAGTGTGGTTGGCGTGGTTCTCCTATTGA
TGTCGTTGCCAGCTTGGCGTCAAGCTCGCCCGTACCATGCCCAGGTATTG
CACGCGTTGTATCAATCGTGGTATGGATTTTTTGTGTTGGACTTGCCCAT
GTGTTGCACTATGCTGTGCAGGAGGTGGCCGTGAAGATTCTCACCATCGA
GAAGGCCATCAACTTCTTGAGGCGCCTGTGCGGGTACTCGGAGTGGATCA
TGGGGCGCATGGCGAAGGCGAGTTGGCGGGCGCTACTGGTGATGATTTCT
TGTGGGTGTCTCTGTTGGAGTCTGCCTCCAGGCTACGGGCGCGACTGTCA
GCAAGGGATGATGGCTGCTGGTGGAGGCTGTGGTGGGCATGCACATGCAT
ATGCACATGCACCGCCTTTTGCTCCGGTTCTTGTACGATATTGGCCGGGC
CGTTTCATTGAGCAAGCCGAAGCTTTGAAGAAGTTTAGGTTGATGCTCCG
GCCTGATTTGATGCTGGTGGGACGCATCTGTGTAAGATGTCATTTGGCTG
CGCTTGTGTACATGTGAAGTGGTTTTTCCACTCATTTGCTTGCCTTTGCG
ACCCCCAATTGCATCTCCACAAATGAAAACTATCATGGGTACATGAGCAT
TGCCTGCTAGGTGCTCGTCCGATCTCTTCACCACACAGGTTTTGTTTTTT
ATTCCGAGTAGGCGCCAGGAAAGAAACTGCATGTTTAGTTTTCGGGCCAG
TCGAATCAAGGGTCATGTGAGTCCACGCAAGGAGATACAGCGATCGATCA
CTTTCCAACATTTTCCTATCCGCCCGGCGTTCAGGAACTTGTTGAGCATG
TCCATCAGCCCACTCACATCTCTCACATATCTAACCAAGAGTCCCCACAA
ATCTCCGAAATCTCCAAACGCAGGCAGCGGCCCAGGCCACAAGGCTGGAA
TACGGGAACACGACATCCCTCAGGGCTGTGGTGGAGTCTTGCTCCGCCCT
GACCAACGCCAGGCTCGTGCACCTCATGCTCGGGGCCTCCCAACTAAAGT
CGCACCTTCGAGTCCTCAAGAAGTTTCTTCTCCACGGACAGGTGAGATTC
ACTGACCAAGGTGCGGTAGCGGACAGGCGACACATGCCACCTCAACACGC
CTCTTCGGGTGTGTGTGATCCTTTTGTTTTGGCTAGAAGGATGGATGGAG
CGGTCCCTTTCCCACGCCGACCGTAAAGTCGACTGTTGAGGTCCCGCGAA
GTAGGCGTTCTCCGTGCGTGGCTGCATGTGTTTTTTAGAACAGATCCCAG
GCCTAGTGGCGCCGCCGAGATTCGAACCCACGTCCTCTACGGTCACGATG
CTGCCCCCTTTTATCTTTTCCCTGGTGATGAACAATGATGACCCTGTCTA
TCACGCTGATGCTGAGTATTGATTTCGGTCTCTGTGACGTCTGCTGATTG
TGGGTGCTGCCTCCGAAGCGGTGCTGGATGATAGTCGCTACCGTGACCCC
ATCTTCACAACCTTTAGCCTTATCTGTCTTCGGCAACAACGACGCAACCG
CCTTCGTGATGTCAGGGAGATCTCATGCTCACCCTCATTGAAGTGCTCGG
ACCAGAGCTTGACAAGAAGGCCACGGTGATCTACCGGCACAACGTGATGG
GGATAGTCAAGGGCGTGATCAAGACTAGTGCTATCCTGCAGGACGAAGCG
GAAGACGTTGCTAGGATCGGAGTCAAGATTTACGTGAGCGATGGTCCGTG
GCCGCGGCGTGACGATTTCGCCGTTAGCGACAGAAAATCCTTGTCATGTT
ACGTGTTCCATTCCGGAAAGTAGCTTCTTGGGAGGTAAAGACTGCAAGAC
TGGACACCGGGGGCAATGTAAGGAATAAAGAGAACTATTCGCTGCTAATT
GCTTCTTTTCGCTGGGTTGTGTTCGACACGAGGCGATCTTCGAGTAGATT
CGATGTGCGTCATACTTTACCCCGGTATCTTGGGATCGCGACGGCTGCAT
CTCCCTACTATTTAGAATATTACAAATACCTGACCAACGCCATGTCCTCC
TTATTTGCCAACCCGCAGTGAGCCTGATGACGCACCCACTTGAGATAGTA
CGCACCACAAACAGTAACACCACACCCGGTGGAAGAAGTTTGTTTCCGCG
TCAACATGAGCCCAGATTCACTCTCAGATCAAGTATTAGGGTGACACAAG
ATACCACACAGCCCATATCGCGGATCTTGTGGCGTTGATAACCACCTTGT
CATAACTGCATCGCGACTTCCCCCTGTCTTCGGCCCATTAAACCGTGTGT
TATGACTTCGTTCGTGTGGCAATGCCTGCCTCTCCATCTCTCAGGGGATG
GGATGCCTTTTCGCTCGAGTACGATGTAGGCGCTCCCATCTCGACCGTGG
TTACGAAAGAGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1351:6713..10575+

>mRNA_Ecto-sp13_S_contig1351.2794.1 ID=mRNA_Ecto-sp13_S_contig1351.2794.1|Name=mRNA_Ecto-sp13_S_contig1351.2794.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=789bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1351:6713..10575+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGATGATGAACCGTCAAGGGTTGTTTTTGGCCTCTCTTTTTGCGAG
AGGCGCTTGTTTTGCGCTGTACTCTGGGCGTGACAATGCTCTCGAGCATT
TTTGTATTTTTGTCGTACCATACACTCGGTATCTCCATTGTATATTTCGC
CTTCCTCAAAGAGCAAGGCTAGACGGAGGACGAGCATTGTACGGTATTAT
ATACAAGTACTCGGGATCCCCGGACAAAAAGGCCCCGCGGGACGGGTCGG
CGTATCTCCTGGAGCACGAAGCATTGGTGGCGCGAGAGGCCTCCAATGGA
TCCCATGGAGAGGAGGTGGCCGTGAAGATTCTCACCATCGAGAAGGCCAT
CAACTTCTTGAGGCGCCTGTGCGGGTACTCGGAGTGGATCATGGGGCGCA
TGGCGAAGGCAGCGGCCCAGGCCACAAGGCTGGAATACGGGAACACGACA
TCCCTCAGGGCTGTGGTGGAGTCTTGCTCCGCCCTGACCAACGCCAGGCT
CGTGCACCTCATGCTCGGGGCCTCCCAACTAAAGTCGCACCTTCGAGTCC
TCAAGAAGTTTCTTCTCCACGGACAGGGAGATCTCATGCTCACCCTCATT
GAAGTGCTCGGACCAGAGCTTGACAAGAAGGCCACGGTGATCTACCGGCA
CAACGTGATGGGGATAGTCAAGGGCGTGATCAAGACTAGTGCTATCCTGC
AGGACGAAGCGGAAGACGTTGCTAGGATCGGAGTCAAGATTTACGTGAGC
GATGGGGATGGGATGCCTTTTCGCTCGAGTACGATGTAG
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