prot_Ecto-sp13_S_contig13484.2775.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13484.2775.1
Unique Nameprot_Ecto-sp13_S_contig13484.2775.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length97
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13484.2775.1 vs. uniprot
Match: D7FS42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS42_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.930e-53
Identity = 95/97 (97.94%), Postives = 96/97 (98.97%), Query Frame = 0 
Query:    1 RLSEKKVPPGRLKKSEFLRGYVAIDLALGTLGIPFSKKKLLEKANISKQKAYDDTYQHLRNVLGARVAPMGVSMANIAVKFTGASVERSMALLQRFQ 97
            RLSEKKVPPGRLKK EFLRGYVAIDLALGTLGIPFSKKKLLEKANISKQKAYDDTYQ+LRNVLGARVAPMGVSMANIAVKFTGASVERSMALLQRFQ
Sbjct:   35 RLSEKKVPPGRLKK-EFLRGYVAIDLALGTLGIPFSKKKLLEKANISKQKAYDDTYQYLRNVLGARVAPMGVSMANIAVKFTGASVERSMALLQRFQ 130
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13484.2775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FS42_ECTSI1.930e-5397.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13484contigEcto-sp13_S_contig13484:62..1927 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13484.2775.1mRNA_Ecto-sp13_S_contig13484.2775.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13484 61..1927 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13484.2775.1 ID=prot_Ecto-sp13_S_contig13484.2775.1|Name=mRNA_Ecto-sp13_S_contig13484.2775.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp
RLSEKKVPPGRLKKSEFLRGYVAIDLALGTLGIPFSKKKLLEKANISKQK
AYDDTYQHLRNVLGARVAPMGVSMANIAVKFTGASVERSMALLQRFQ
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