prot_Ecto-sp13_S_contig13454.2753.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13454.2753.1
Unique Nameprot_Ecto-sp13_S_contig13454.2753.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length121
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13454.2753.1 vs. uniprot
Match: D7G6U0_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U0_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 7.220e-11
Identity = 40/52 (76.92%), Postives = 43/52 (82.69%), Query Frame = 0 
Query:   47 SAGNSTTGNFTSGNVSMAGDEAMAVVTVSIAGSPTLVRTPAPAGQAPKSESE 98
            SAGNSTT       VSMAGDEAM VVTVSIAGS TLV+TPAPAGQAP+SES+
Sbjct:   76 SAGNSTTXXXXXXXVSMAGDEAMGVVTVSIAGSATLVQTPAPAGQAPESESD 127
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BLAST of mRNA_Ecto-sp13_S_contig13454.2753.1 vs. uniprot
Match: A0A6H5JDC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC0_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.090e-6
Identity = 35/57 (61.40%), Postives = 40/57 (70.18%), Query Frame = 0 
Query:   47 SAGNSTTGNFTSGNVSMAGDEAMAVVTVSIAGSPTLVRTPAPAGQAPKSESESAGHT 103
            SAGNS           M GDEAM VV+VSIAGS TLV+TPAPAGQAP+SES  + +T
Sbjct:  244 SAGNSXXXXXXXXXXXMGGDEAMGVVSVSIAGSATLVQTPAPAGQAPESESGRSKYT 300
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13454.2753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6U0_ECTSI7.220e-1176.92REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JDC0_9PHAE1.090e-661.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13454contigEcto-sp13_S_contig13454:3312..4150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13454.2753.1mRNA_Ecto-sp13_S_contig13454.2753.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13454 3311..4150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13454.2753.1 ID=prot_Ecto-sp13_S_contig13454.2753.1|Name=mRNA_Ecto-sp13_S_contig13454.2753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=121bp
NFTTPAPTAIGNFTTPAPTAIGNITTPAPTFAGNFSTPSPTVVGNFSAGN
STTGNFTSGNVSMAGDEAMAVVTVSIAGSPTLVRTPAPAGQAPKSESESA
GHTRFLQEDKATTTCDMYTCP
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