prot_Ecto-sp13_S_contig13399.2717.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13399.2717.1
Unique Nameprot_Ecto-sp13_S_contig13399.2717.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length172
Homology
BLAST of mRNA_Ecto-sp13_S_contig13399.2717.1 vs. uniprot
Match: A0A6H5K1J6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J6_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 2.040e-113
Identity = 164/171 (95.91%), Postives = 170/171 (99.42%), Query Frame = 0
Query:    1 SRGATIATIVVHAVALLAFGWIAWSIWLASLISFIMGGILLCQFNKCTYIVAGSLYILGCIFDLVAMAAWIALATSDNYYYNGTQLTSAVGWFALPAALGALSFIIAIVFIFLAICNWEKSGAPDAMGPPMAGGAQVMAPNHGVQMKHHAPQAQPQHVGHTQAPPPYSGNV 171
            SRGATIA+IVVHA+ALLAFGWIAWS+WLASLISFIMGGILLCQFNKCTYIVAGSL+ILGCIFDLVAMAAWIALATSDNYYYNGTQLTSAVGWFALPAALGALSFIIAIVFIFLAICNWEKSGAPDAMGPPMAGGAQV APNHGVQMKHHAPQAQPQ+VGHTQAPPPYSG+V
Sbjct:   28 SRGATIASIVVHAIALLAFGWIAWSVWLASLISFIMGGILLCQFNKCTYIVAGSLFILGCIFDLVAMAAWIALATSDNYYYNGTQLTSAVGWFALPAALGALSFIIAIVFIFLAICNWEKSGAPDAMGPPMAGGAQVTAPNHGVQMKHHAPQAQPQNVGHTQAPPPYSGDV 198          
BLAST of mRNA_Ecto-sp13_S_contig13399.2717.1 vs. uniprot
Match: D7G5D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D4_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 6.980e-110
Identity = 158/171 (92.40%), Postives = 166/171 (97.08%), Query Frame = 0
Query:    1 SRGATIATIVVHAVALLAFGWIAWSIWLASLISFIMGGILLCQFNKCTYIVAGSLYILGCIFDLVAMAAWIALATSDNYYYNGTQLTSAVGWFALPAALGALSFIIAIVFIFLAICNWEKSGAPDAMGPPMAGGAQVMAPNHGVQMKHHAPQAQPQHVGHTQAPPPYSGNV 171
            SRGATIATIVVHA+ALLAFGWI W IWLASLISFIMGGILLCQFNKCTYIVAGSL+ILGCIFDLV+MAAWIA ATSDNYYYNG++L+SAVGWFALPAALGALSFI+AIVFIFLAICNWEKSGAPDAMGPPM GGAQVMAPNHGVQMKHHAPQAQPQ+VGH QAPPPYSGNV
Sbjct:   40 SRGATIATIVVHAIALLAFGWILWGIWLASLISFIMGGILLCQFNKCTYIVAGSLFILGCIFDLVSMAAWIAYATSDNYYYNGSELSSAVGWFALPAALGALSFIVAIVFIFLAICNWEKSGAPDAMGPPMPGGAQVMAPNHGVQMKHHAPQAQPQYVGHAQAPPPYSGNV 210          
BLAST of mRNA_Ecto-sp13_S_contig13399.2717.1 vs. uniprot
Match: A0A6H5KAL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL4_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.960e-20
Identity = 51/141 (36.17%), Postives = 79/141 (56.03%), Query Frame = 0
Query:    1 SRGATIATIVVHAVALLAFGWI-AWSIWLASLISFIMGGILLCQFNKCTYIVAGSLYILGCIFDLVAMAAWIALATS--DNYYYNGTQLT------------SAVGWFALPAALGALSFIIAIVFIFLAICNWEKSGAPDA 126
            +R   I  I+VH  ALL FGW+  W  W+AS+++FIM G+LLC +++C YI  G  + +  +FD++ +  WIA+  +  D+YY                   + + WFAL   LGALS  +  VF F ++C W+ +G+P A
Sbjct:    9 ARACAICAIIVHVGALLVFGWLWVWQ-WIASVLAFIMCGVLLCMYDRCAYITGGICFAVAAVFDILVLVGWIAIYNNLQDDYYXXXXXXXXXXXDGEWEDWKNVILWFALLPFLGALSLGLGAVFSFTSLCFWKDAGSPAA 148          
BLAST of mRNA_Ecto-sp13_S_contig13399.2717.1 vs. uniprot
Match: A0A6H5JWS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS2_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 8.780e-9
Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 0
Query:    1 SRGATIATIVVHAVAL-LAFGWIAWSIWLASLISFIMGGILLCQFNKCTYIVAGSLYILGCIFDLVAMAAWIA----LATSDNYYYNGTQL----------TSAVGWFALPAALGALSFIIAIVFIFLAICNWEKSGAPDAMGPPMA 132
            +RG  I +IV+HA++  L  G+  W    A  I+F+MGG+LLC + +  Y++    + L  +FD++A+  WI     +  SD+ Y    Q+          ++ + W A+P  LGA++  +  +F F AI  W+  G       P+A
Sbjct:   39 ARGCAILSIVIHAISFYLGGGFFVWQR-NACFIAFVMGGLLLCFYERYMYVIGSLGFALCAVFDVLAVLRWITRDDEIFDSDDDYNTTFQVDDTQSEESSDSTILLWLAVPPFLGAIAMGLGAIFTFTAIFAWKYGGGTAIPHVPVA 184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13399.2717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K1J6_9PHAE2.040e-11395.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5D4_ECTSI6.980e-11092.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAL4_9PHAE3.960e-2036.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWS2_9PHAE8.780e-929.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..92
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13399contigEcto-sp13_S_contig13399:2331..4343 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13399.2717.1mRNA_Ecto-sp13_S_contig13399.2717.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13399 2331..4343 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13399.2717.1 ID=prot_Ecto-sp13_S_contig13399.2717.1|Name=mRNA_Ecto-sp13_S_contig13399.2717.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=172bp
SRGATIATIVVHAVALLAFGWIAWSIWLASLISFIMGGILLCQFNKCTYI
VAGSLYILGCIFDLVAMAAWIALATSDNYYYNGTQLTSAVGWFALPAALG
ALSFIIAIVFIFLAICNWEKSGAPDAMGPPMAGGAQVMAPNHGVQMKHHA
PQAQPQHVGHTQAPPPYSGNV*
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