prot_Ecto-sp13_S_contig13394.2715.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig13394.2715.1
Unique Name	prot_Ecto-sp13_S_contig13394.2715.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	397

Homology

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BLAST of mRNA_Ecto-sp13_S_contig13394.2715.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 688 bits (1775), Expect = 1.560e-244
Identity = 343/412 (83.25%), Postives = 352/412 (85.44%), Query Frame = 0

Query:    1 MFDNRLIPDGNLHNYTQRNSPKIVDVAGESQLKGTATGILHSTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKKGLRCVVEESTPHLTIQGK----------------------------------------TRTANAVCFTLVIADTWHRRLGHLNARSLDILRKDTDTGVDYRGNLSPCGVCQIAKHKQSPRPQQSTREPSRPGQLVVIDNMGPVNPPAKYKGGFFPYACKITDDYTKMKEVYLLRKKSDTTEVVHTYNMCVAAAGGYRIETIRCDKGGENTGSELRNYCKKSAIKLEYAATNTPQQIGVSERDGQTLAAVTQCHLKDGDFPPSMWGELMLTGAYLLNRSPHSALGGATPYAKLHNKSPDLSGLRVIGARAFVHHEIYRKKLDDRAFEGKLCGSGLD 372
            MFDNRLIPDGNLH+YTQRNSPKIVDVAGE QLKGTATGILH TVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLK+GLRCV E+STPHLTIQGK                                        T TANAVCFTLV ADTWHRRLGHLNARSLDILRKDT T VDYR +LSPCGVCQIAKHKQSP P+QSTRE SRPGQLVVIDNMGPVNPPAKYKGG FPYACK+TDDYTKMKEVYLLRKKSDTTE VHTYNMCVAAAGGYRIETIRCDKGGENTGSE R+YCK SAIKLEYAATNTPQQIGVSERDGQTLA VT+C LKDGDFPPSMWGELMLT AYLLNRSPHSALGGATPY+KL NKSPDLSGLRVIGARAFVHHE YRKKLDDRAFEGKLCG GLD
Sbjct:  218 MFDNRLIPDGNLHDYTQRNSPKIVDVAGERQLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 629

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BLAST of mRNA_Ecto-sp13_S_contig13394.2715.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 640 bits (1650), Expect = 9.550e-225
Identity = 324/398 (81.41%), Postives = 329/398 (82.66%), Query Frame = 0

Query:   31 QLKGTATGILHSTVKDNRGQQLRVRIQGLIVPGLGRNIFS-----------PTSLLKKGLRCVVEESTPHLTIQGK----------------------------------------TRTANAVCFTLVIADTWHRRLGHLNARSLDILRKDTDTGVDYRGNLSPCGVCQIAKHKQSPRPQQSTREPSRPGQLVVIDNMGPVNPPAKYKGGFFPYACKITDDYTKMKEVYLLRKKSDTTEVVHTYNMCVAAAGGYRIETIRCDKGGENTGSELRNYCKKSAIKLEYAATNTPQQIGVSERDGQTLAAVTQCHLKDGDFPPSMWGELMLTGAYLLNRSPHSALGGATPYAKLHNKSPDLSGLRVIGARAFVHHEIYRKKLDDRAFEGKLCGSGLDSQTYR 377
            QLKGTATGILH TVKDNRGQQLRVRIQGLIVPGLGRNIFS           PTSLLKKGLRCVVEESTPHLTIQ K                                        T TANAVCFTLV ADTWHRRLGHLNARSLDILRKDT TGVDYR +LSPCGVCQIAKHKQSP P+QSTRE SRPGQLVVIDNMGPVNPPAKYKGG FPYACKITDDYTKMKEVYLLRKKSDTTE VHTYNMCVAAAGGYRIETIRCDKGGENTGSE R+YCK SAIKLEYAATNTPQQIG SERDGQTLA VT+C LKDGDFPPSMWGELMLT AYLLNRSPHSALGGATPY+KLHNKSPDLSGLRVIGARAFVHHE YRKKLDDRAFEGKLCG GLDSQTYR
Sbjct:  289 QLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSSRTLLLGMDFSPTSLLKKGLRCVVEESTPHLTIQDKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYR 686

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BLAST of mRNA_Ecto-sp13_S_contig13394.2715.1 vs. uniprot
Match: A0A6H5KMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG5_9PHAE)

HSP 1 Score: 641 bits (1654), Expect = 1.870e-224
Identity = 351/537 (65.36%), Postives = 360/537 (67.04%), Query Frame = 0

Query:    1 MFDNRLIPDGNLHNYTQRNSPKIVDVAGESQLKGTATGILHSTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKKGLRCVVEESTPHLTIQGK----------------------------------------TRTANAVCFTLVIADTWHRRLGHLNARSLDILRKDTDTGVDYRGNLSPCGVCQIAKHKQSPRPQQSTREPSRPGQLVVIDNMGPVNPPAKYKGGFFPYACKITDDYTKMKEVYLLRKKSDTTEVVHTYNMCVAAAGGYRIETIRCDKGGENTG--------------------------------------------------------------SELRNYCKKSA--------------------------------------IKLEYAATNTPQQIGVSERDGQTLAAVTQCHLKDGDFPPSMWGELMLTGAYLLNRSPHSALGGATPYAKLHNKSPDLSGLRVIGARAFVHHEIYRKKLDDRAFEGKLCGSGLDSQTYRVLNPSNGAVVESRTVTFIES 397
            M DNRLIPDGNLH+YTQRNSPKIV VAG  QLKGTATGILH TVKDNRGQQLRVRIQG IVPGLGRNIFSPTSLLKKGLRCVVEESTPHLT QGK                                        T TANAVCFTLV ADTWHRRLGHLNARSLDILRKDT TGVDYR +LSPCGVCQIAKHKQSP P+QSTRE SRPGQLVVI NMGPVNPPAKYKGG FPY  KITDDYTKMK+VYLLRKKSDTTE VHTYNMCV AAGGYRIETIRCDKGGENTG                                                              + L N    SA                                      IKLE+AATNTPQQ+GVSERDGQTLA V +C LKDG FPPSM GELML  AYLLNRSPHSALGGATPY+KLHNKSPDLSGLRVI ARAFVHHE YRKKLDDRAFE KLCG GLDSQTYRVLNPSNGAVVESR VTFIES
Sbjct:  183 MLDNRLIPDGNLHDYTQRNSPKIVGVAGGRQLKGTATGILHCTVKDNRGQQLRVRIQGFIVPGLGRNIFSPTSLLKKGLRCVVEESTPHLTFQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIGNMGPVNPPAKYKGGSFPYVRKITDDYTKMKKVYLLRKKSDTTEAVHTYNMCVVAAGGYRIETIRCDKGGENTGWIRISGLLQEFSYIKLEFAATNTPQQVGVSERDGQTLAGVIRCLLKDGYFPPSMCGELMLPAAYLLNRSPHSALGGAXAAGGYRIETIRCDKGGENTGWIRISGLLQEFSYIKLEFAATNTPQQVGVSERDGQTLAGVIRCLLKDGYFPPSMCGELMLPAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIRARAFVHHEKYRKKLDDRAFEAKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 719

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BLAST of mRNA_Ecto-sp13_S_contig13394.2715.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 584 bits (1505), Expect = 1.770e-201
Identity = 282/305 (92.46%), Postives = 288/305 (94.43%), Query Frame = 0

Query:   93 QGKTRTANAVCFTLVIADTWHRRLGHLNARSLDILRKDTDTGVDYRGNLSPCGVCQIAKHKQSPRPQQSTREPSRPGQLVVIDNMGPVNPPAKYKGGFFPYACKITDDYTKMKEVYLLRKKSDTTEVVHTYNMCVAAAGGYRIETIRCDKGGENTGSELRNYCKKSAIKLEYAATNTPQQIGVSERDGQTLAAVTQCHLKDGDFPPSMWGELMLTGAYLLNRSPHSALGGATPYAKLHNKSPDLSGLRVIGARAFVHHEIYRKKLDDRAFEGKLCGSGLDSQTYRVLNPSNGAVVESRTVTFIES 397
            Q +T TANAVCFTLV ADTWHRRLGHLNARSLDILRKDT TGVDYR +LSPCGVCQIAKHKQSP P+QSTRE SRPGQLVVIDNMGPVNPPAKYKGG FPYACKITDDYTKMKEVYLLRKKSDTTE VHTYNMCVAAAGGYRIETIRCDKGGENTGSE R+YCK SAIKLEYAATNTPQQIGVSERDGQTLA VT+C LKDGDFPPSMWGELMLT AYLLNRSPHSALGGATPY+KLHNKSPDLSGLRVIGARAFVHHE YRKKLDDRAFEGKLCG GLDSQTYRVLNPSNGAVVESR VTFIES
Sbjct:   26 QSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330

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BLAST of mRNA_Ecto-sp13_S_contig13394.2715.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 573 bits (1478), Expect = 1.290e-200
Identity = 278/305 (91.15%), Postives = 285/305 (93.44%), Query Frame = 0

Query:   93 QGKTRTANAVCFTLVIADTWHRRLGHLNARSLDILRKDTDTGVDYRGNLSPCGVCQIAKHKQSPRPQQSTREPSRPGQLVVIDNMGPVNPPAKYKGGFFPYACKITDDYTKMKEVYLLRKKSDTTEVVHTYNMCVAAAGGYRIETIRCDKGGENTGSELRNYCKKSAIKLEYAATNTPQQIGVSERDGQTLAAVTQCHLKDGDFPPSMWGELMLTGAYLLNRSPHSALGGATPYAKLHNKSPDLSGLRVIGARAFVHHEIYRKKLDDRAFEGKLCGSGLDSQTYRVLNPSNGAVVESRTVTFIES 397
            Q +T TANAVCFTLV ADTWHRRLGHLNARSLDILRKDT TGVDYR +LSPCGVCQIAKHKQSP P+QSTRE SRPGQLVVIDNMGPVNPPAKYKGG FPYACKITDDYTKMKEVYLLRKKSDTTE VHTYNMCVAAAGGYRIETIRCDKGGENTGSE R+ CK SAIKLEYAATNTPQQ+GVSERDGQTLA VT+C LKDGDFPPSMWGELMLT AYLLNRSPHSALGGATPY+KLHNKSPDLSGLRVIGARAFVHHE  RKKLDDRAFEGKLCG GLDSQTYRVLNPSNGA VESR VTFIES
Sbjct:   26 QSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERCRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAGVESRNVTFIES 330

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BLAST of mRNA_Ecto-sp13_S_contig13394.2715.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 581 bits (1498), Expect = 1.390e-199
Identity = 281/305 (92.13%), Postives = 287/305 (94.10%), Query Frame = 0

Query:   93 QGKTRTANAVCFTLVIADTWHRRLGHLNARSLDILRKDTDTGVDYRGNLSPCGVCQIAKHKQSPRPQQSTREPSRPGQLVVIDNMGPVNPPAKYKGGFFPYACKITDDYTKMKEVYLLRKKSDTTEVVHTYNMCVAAAGGYRIETIRCDKGGENTGSELRNYCKKSAIKLEYAATNTPQQIGVSERDGQTLAAVTQCHLKDGDFPPSMWGELMLTGAYLLNRSPHSALGGATPYAKLHNKSPDLSGLRVIGARAFVHHEIYRKKLDDRAFEGKLCGSGLDSQTYRVLNPSNGAVVESRTVTFIES 397
            Q +T TANAVCFTLV ADTWHRRLGHLNARSLDILRKDT TGVDYR +LSPCGVCQIAKHKQSP P+QSTRE SRPGQLVVIDNMGPVNPPAKYKGG FPYACKITDDYTKMKEVYLLRKKSDTTE VHTYNMCVAAAGGYRIETIRCDKGGENTGSE R+YCK SAIKLEYAATNTPQQIG SERDGQTLA VT+C LKDGDFPPSMWGELMLT AYLLNRSPHSALGGATPY+KLHNKSPDLSGLRVIGARAFVHHE YRKKLDDRAFEGKLCG GLDSQTYRVLNPSNGAVVESR VTFIES
Sbjct:   26 QSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGGSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13394.2715.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 584 bits (1505), Expect = 1.280e-197
Identity = 282/305 (92.46%), Postives = 288/305 (94.43%), Query Frame = 0

Query:   93 QGKTRTANAVCFTLVIADTWHRRLGHLNARSLDILRKDTDTGVDYRGNLSPCGVCQIAKHKQSPRPQQSTREPSRPGQLVVIDNMGPVNPPAKYKGGFFPYACKITDDYTKMKEVYLLRKKSDTTEVVHTYNMCVAAAGGYRIETIRCDKGGENTGSELRNYCKKSAIKLEYAATNTPQQIGVSERDGQTLAAVTQCHLKDGDFPPSMWGELMLTGAYLLNRSPHSALGGATPYAKLHNKSPDLSGLRVIGARAFVHHEIYRKKLDDRAFEGKLCGSGLDSQTYRVLNPSNGAVVESRTVTFIES 397
            Q +T TANAVCFTLV ADTWHRRLGHLNARSLDILRKDT TGVDYR +LSPCGVCQIAKHKQSP P+QSTRE SRPGQLVVIDNMGPVNPPAKYKGG FPYACKITDDYTKMKEVYLLRKKSDTTE VHTYNMCVAAAGGYRIETIRCDKGGENTGSE R+YCK SAIKLEYAATNTPQQIGVSERDGQTLA VT+C LKDGDFPPSMWGELMLT AYLLNRSPHSALGGATPY+KLHNKSPDLSGLRVIGARAFVHHE YRKKLDDRAFEGKLCG GLDSQTYRVLNPSNGAVVESR VTFIES
Sbjct:   26 QSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13394.2715.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 584 bits (1505), Expect = 8.790e-197
Identity = 282/305 (92.46%), Postives = 288/305 (94.43%), Query Frame = 0

Query:   93 QGKTRTANAVCFTLVIADTWHRRLGHLNARSLDILRKDTDTGVDYRGNLSPCGVCQIAKHKQSPRPQQSTREPSRPGQLVVIDNMGPVNPPAKYKGGFFPYACKITDDYTKMKEVYLLRKKSDTTEVVHTYNMCVAAAGGYRIETIRCDKGGENTGSELRNYCKKSAIKLEYAATNTPQQIGVSERDGQTLAAVTQCHLKDGDFPPSMWGELMLTGAYLLNRSPHSALGGATPYAKLHNKSPDLSGLRVIGARAFVHHEIYRKKLDDRAFEGKLCGSGLDSQTYRVLNPSNGAVVESRTVTFIES 397
            Q +T TANAVCFTLV ADTWHRRLGHLNARSLDILRKDT TGVDYR +LSPCGVCQIAKHKQSP P+QSTRE SRPGQLVVIDNMGPVNPPAKYKGG FPYACKITDDYTKMKEVYLLRKKSDTTE VHTYNMCVAAAGGYRIETIRCDKGGENTGSE R+YCK SAIKLEYAATNTPQQIGVSERDGQTLA VT+C LKDGDFPPSMWGELMLT AYLLNRSPHSALGGATPY+KLHNKSPDLSGLRVIGARAFVHHE YRKKLDDRAFEGKLCG GLDSQTYRVLNPSNGAVVESR VTFIES
Sbjct:   26 QSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13394.2715.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 574 bits (1480), Expect = 2.200e-195
Identity = 280/314 (89.17%), Postives = 287/314 (91.40%), Query Frame = 0

Query:   84 EESTPHLTIQGKTRTANAVCFTLVIADTWHRRLGHLNARSLDILRKDTDTGVDYRGNLSPCGVCQIAKHKQSPRPQQSTREPSRPGQLVVIDNMGPVNPPAKYKGGFFPYACKITDDYTKMKEVYLLRKKSDTTEVVHTYNMCVAAAGGYRIETIRCDKGGENTGSELRNYCKKSAIKLEYAATNTPQQIGVSERDGQTLAAVTQCHLKDGDFPPSMWGELMLTGAYLLNRSPHSALGGATPYAKLHNKSPDLSGLRVIGARAFVHHEIYRKKLDDRAFEGKLCGSGLDSQTYRVLNPSNGAVVESRTVTFIES 397
            E   PH   Q +T TANAVCFTLV ADTWHRRLGHLNARSLDILRKDT TGVDYR +LSPCGVCQIAKHKQSP P+QSTRE SR GQLVVIDNMGP NPPAKY+GG FPYACKITDDYTKMKEVYLLRKKSDTTE VHTYNMCVAAAGGYRIE IRCDKGGENTGSE R+YCK SAIKLEYAATNTPQQIGVSERDGQTLA VT+C LKDGDFPPSMWGELMLT AYLLNRSPHSALGGATPY+KLHNKSPDL GLRVIGARAFVHHE YRKKLDDRAFEGKLCG GLDSQTYRVLNPSNGAVVESR VTFIES
Sbjct:  214 ESLVPHQK-QSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRSGQLVVIDNMGPANPPAKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIEAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLLGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 526

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13394.2715.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 565 bits (1457), Expect = 9.700e-191
Identity = 273/305 (89.51%), Postives = 285/305 (93.44%), Query Frame = 0

Query:   93 QGKTRTANAVCFTLVIADTWHRRLGHLNARSLDILRKDTDTGVDYRGNLSPCGVCQIAKHKQSPRPQQSTREPSRPGQLVVIDNMGPVNPPAKYKGGFFPYACKITDDYTKMKEVYLLRKKSDTTEVVHTYNMCVAAAGGYRIETIRCDKGGENTGSELRNYCKKSAIKLEYAATNTPQQIGVSERDGQTLAAVTQCHLKDGDFPPSMWGELMLTGAYLLNRSPHSALGGATPYAKLHNKSPDLSGLRVIGARAFVHHEIYRKKLDDRAFEGKLCGSGLDSQTYRVLNPSNGAVVESRTVTFIES 397
            Q +T TANAVCFTLV ADTWHRRLGHLNARSLDILRKDT TGVD+R +LSPCGVCQIAK+KQSP P+QSTRE SRPGQLVVIDN+GPVNPPAKY GG FPYACKITDDYTK+KEVYLLRKKS+TTE VHTYN+CVAAAGGYRIETIRCDKGGENTGSE R+YCK SAIKLEYAATNTPQQIGVSERDGQTLA VT+C LKDGDFPPSMWGELMLT AYLLNRSPHSALGGATPY+KLHNKSPDLS LRVIGARAFVH E YRKKLDDRAFEGKLCG GLDSQTYRVLNPSNGAVVESR VTFIES
Sbjct:   26 QSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDFRDSLSPCGVCQIAKYKQSPHPKQSTRELSRPGQLVVIDNVGPVNPPAKYNGGSFPYACKITDDYTKVKEVYLLRKKSNTTEAVHTYNICVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSRLRVIGARAFVHQERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig13394.2715.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig13394.2715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KVF6_9PHAE	1.560e-244	83.25	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KT84_9PHAE	9.550e-225	81.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KMG5_9PHAE	1.870e-224	65.36	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K500_9PHAE	1.770e-201	92.46	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KCM0_9PHAE	1.290e-200	91.15	Integrase catalytic domain-containing protein n=5 ...	[more]
A0A6H5K1R7_9PHAE	1.390e-199	92.13	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5JJR8_9PHAE	1.280e-197	92.46	Integrase catalytic domain-containing protein n=11...	[more]
A0A6H5KCT3_9PHAE	8.790e-197	92.46	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JSL6_9PHAE	2.200e-195	89.17	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JRJ1_9PHAE	9.700e-191	89.51	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 166..283 e-value: 7.9E-14 score: 51.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 164..333 score: 16.977
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 108..152 e-value: 1.5E-6 score: 27.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 158..350 e-value: 6.2E-23 score: 83.0
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 92..396
None	No IPR available	PANTHER	PTHR11439:SF250		coord: 92..396
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 164..327

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig13394	contig	Ecto-sp13_S_contig13394:91..1401 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig13394.2715.1	mRNA_Ecto-sp13_S_contig13394.2715.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig13394 61..1401 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig13394.2715.1 ID=prot_Ecto-sp13_S_contig13394.2715.1|Name=mRNA_Ecto-sp13_S_contig13394.2715.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=397bp
MFDNRLIPDGNLHNYTQRNSPKIVDVAGESQLKGTATGILHSTVKDNRGQ
QLRVRIQGLIVPGLGRNIFSPTSLLKKGLRCVVEESTPHLTIQGKTRTAN
AVCFTLVIADTWHRRLGHLNARSLDILRKDTDTGVDYRGNLSPCGVCQIA
KHKQSPRPQQSTREPSRPGQLVVIDNMGPVNPPAKYKGGFFPYACKITDD
YTKMKEVYLLRKKSDTTEVVHTYNMCVAAAGGYRIETIRCDKGGENTGSE
LRNYCKKSAIKLEYAATNTPQQIGVSERDGQTLAAVTQCHLKDGDFPPSM
WGELMLTGAYLLNRSPHSALGGATPYAKLHNKSPDLSGLRVIGARAFVHH
EIYRKKLDDRAFEGKLCGSGLDSQTYRVLNPSNGAVVESRTVTFIES

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR025724	GAG-pre-integrase_dom
IPR036397	RNaseH_sf
IPR039537	Retrotran_Ty1/copia-like
IPR012337	RNaseH-like_sf