prot_Ecto-sp13_S_contig13317.2657.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13317.2657.1
Unique Nameprot_Ecto-sp13_S_contig13317.2657.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length244
Homology
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 1.900e-127
Identity = 192/221 (86.88%), Postives = 198/221 (89.59%), Query Frame = 0
Query:   23 RCNDGFEGYDGGECSGLDRADYAFPVFENCHFXXXXXXYDSSQEEFDACGDRTVTGLSVVGELVARGHVYREAKYDDILGGHYIFADHSVGSLHHLAPAAGGGRTTGTIFSSIPEIGSFAERNDGELYMVGYQGNIYDLPYGDLCESVEEQEEASSACLPQSDTTPTFEEIGCFLNGKLKTMTLSTAPGCDGTMNAEMCASFCATVEGTTHFGLQYQRECY 243
            RCNDGFEGYDGGECSGLDRADYAFPVFE CH       YDSSQEEFDACGDRTVTGLSV+G     GHVYR AKYDDILGGHYIFADHSVGSLHHLAPAAGGG T GT+ SSIP+IG FAE NDGELYMVGYQGNIYDLP GDLCES EEQ+EASSACLPQSDTTPTFEEIGCFL+G+ KTMTLSTAPGCDGTMNAEMCASFCATVEG THFGLQYQRECY
Sbjct:  434 RCNDGFEGYDGGECSGLDRADYAFPVFEYCHVD-----YDSSQEEFDACGDRTVTGLSVIG-----GHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTVLSSIPKIGGFAEGNDGELYMVGYQGNIYDLPCGDLCESGEEQKEASSACLPQSDTTPTFEEIGCFLDGEPKTMTLSTAPGCDGTMNAEMCASFCATVEGATHFGLQYQRECY 644          
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 2.770e-25
Identity = 67/152 (44.08%), Postives = 87/152 (57.24%), Query Frame = 0
Query:   23 RCNDGFEGYDGGECSGLDRADYAFPVFENCH---FXXXXXXYDSSQEEFDACGDRTVTGLSVVGELVARGHVYREAKYDDILGGHYIFADHSVGSLHHLAPAAGGGRTTGTI----FSSIPEIGSFAERNDGELYMVGYQGNIYDLPYGDLC 167
            RC    E      C  LDR+ + FP F  CH   +      Y  S +    CGDR+V G +V+      G+VYR AKYDD+LGG+ IFAD ++  L+HL P  GGG  +GTI    F ++  I   AE NDGELY+V YQG I+++P GDLC
Sbjct:  314 RCMQQIEDQFPETCEFLDRSPFTFPEFNYCHPDFYPVDHPSYIVSDQSI--CGDRSVIGTAVIA-----GYVYRGAKYDDLLGGNLIFADFTLNRLYHLFPTKGGGWGSGTIKGDDFFAVSHI---AEDNDGELYVVQYQGTIFEMPCGDLC 455          
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: D7FJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN8_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 4.380e-6
Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 0
Query:  115 LHHLAPAAGGGRTTGTI----FSSIPEIGSFAERNDGELYMVGYQGNIYDLPYGDLC 167
            L+HL P  GGG  +GTI    F ++  I   AE NDGELY+V YQG I+++P GDLC
Sbjct:  446 LYHLFPTTGGGWGSGTIKGDDFFAVSHI---AEDNDGELYVVQYQGTIFEMPCGDLC 499          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJP1_ECTSI1.900e-12786.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KS07_9PHAE2.770e-2544.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJN8_ECTSI4.380e-652.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13317contigEcto-sp13_S_contig13317:176..3734 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13317.2657.1mRNA_Ecto-sp13_S_contig13317.2657.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13317 176..4322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13317.2657.1 ID=prot_Ecto-sp13_S_contig13317.2657.1|Name=mRNA_Ecto-sp13_S_contig13317.2657.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=244bp
VSSRHHSPGVARTTDGGCSRDPRCNDGFEGYDGGECSGLDRADYAFPVFE
NCHFEYCHFDYDSSQEEFDACGDRTVTGLSVVGELVARGHVYREAKYDDI
LGGHYIFADHSVGSLHHLAPAAGGGRTTGTIFSSIPEIGSFAERNDGELY
MVGYQGNIYDLPYGDLCESVEEQEEASSACLPQSDTTPTFEEIGCFLNGK
LKTMTLSTAPGCDGTMNAEMCASFCATVEGTTHFGLQYQRECY*
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