mRNA_Ecto-sp13_S_contig13317.2657.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI) HSP 1 Score: 493 bits (1270), Expect = 4.700e-165 Identity = 240/274 (87.59%), Postives = 248/274 (90.51%), Query Frame = 1
Query: 67 RCNDGFEGYDGGECSGLDRADYAFPVFENCHFXXXXXXYDSSQEEFDACGDRTVTGLSVVGELVARGHVYREAKYDDILGGHYIFADHSVGSLHHLAPAAGGGRTTGTIFSSIPEIGSFAERNDGELYMVGYQGNIYDLPYGDLCESVEEQEEASSACLPQSDTTPTFEEIGCFLNGKLKTMTLSTAPGCDGTMNAEMCASFCATVEGTTHFGLQYQRECY*GGEGDEYAQSGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAITGEGAPSEDA 888
RCNDGFEGYDGGECSGLDRADYAFPVFE CH YDSSQEEFDACGDRTVTGLSV+G GHVYR AKYDDILGGHYIFADHSVGSLHHLAPAAGGG T GT+ SSIP+IG FAE NDGELYMVGYQGNIYDLP GDLCES EEQ+EASSACLPQSDTTPTFEEIGCFL+G+ KTMTLSTAPGCDGTMNAEMCASFCATVEG THFGLQYQRECY GGEGD+Y Q GDQLDDAECDMPCSGFPTQMCGGRSKMNVFAITG+GAPSEDA
Sbjct: 434 RCNDGFEGYDGGECSGLDRADYAFPVFEYCHVD-----YDSSQEEFDACGDRTVTGLSVIG-----GHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTVLSSIPKIGGFAEGNDGELYMVGYQGNIYDLPCGDLCESGEEQKEASSACLPQSDTTPTFEEIGCFLDGEPKTMTLSTAPGCDGTMNAEMCASFCATVEGATHFGLQYQRECYCGGEGDDYVQYGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAITGDGAPSEDA 697
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE) HSP 1 Score: 114 bits (285), Expect = 1.160e-24 Identity = 67/152 (44.08%), Postives = 87/152 (57.24%), Query Frame = 1
Query: 67 RCNDGFEGYDGGECSGLDRADYAFPVFENCH---FXXXXXXYDSSQEEFDACGDRTVTGLSVVGELVARGHVYREAKYDDILGGHYIFADHSVGSLHHLAPAAGGGRTTGTI----FSSIPEIGSFAERNDGELYMVGYQGNIYDLPYGDLC 501
RC E C LDR+ + FP F CH + Y S + CGDR+V G +V+ G+VYR AKYDD+LGG+ IFAD ++ L+HL P GGG +GTI F ++ I AE NDGELY+V YQG I+++P GDLC
Sbjct: 314 RCMQQIEDQFPETCEFLDRSPFTFPEFNYCHPDFYPVDHPSYIVSDQSI--CGDRSVIGTAVIA-----GYVYRGAKYDDLLGGNLIFADFTLNRLYHLFPTKGGGWGSGTIKGDDFFAVSHI---AEDNDGELYVVQYQGTIFEMPCGDLC 455
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: A0A2U8JQ39_9PEZI (Hybrid B heme peroxidase n=7 Tax=Chaetomium thermophilum TaxID=209285 RepID=A0A2U8JQ39_9PEZI) HSP 1 Score: 66.2 bits (160), Expect = 2.020e-8 Identity = 39/117 (33.33%), Postives = 59/117 (50.43%), Query Frame = 1
Query: 529 SSACLPQSDTTPTFEEIGCFLNGKLKTMTLSTAPGCDGTMNAEMCASFCATVEGTTHFGLQYQRECY*GGEGDEYAQSGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAITGEGAPS 879
++A T F +GC+ G TLS G M E CA+FC +G +FG++Y ECY G + + L+D C+M CSG P+Q CGG S+++++ G P+
Sbjct: 804 TTAAPSHQPTASPFTFVGCWTEGT-NGRTLSGKTSVSGDMTVESCAAFC---DGYKYFGVEYSSECYCGNTINPTSSEAPSLND--CNMLCSGNPSQYCGGPSRLDLYENEGVIVPT 914
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: B2ANZ0_PODAN (Podospora anserina S mat+ genomic DNA chromosome 7, supercontig 3 n=2 Tax=Podospora TaxID=5144 RepID=B2ANZ0_PODAN) HSP 1 Score: 63.9 bits (154), Expect = 2.250e-8 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 646 MNAEMCASFCATVEGTTHFGLQYQRECY*GGEGDEYAQSGDQLDDAECDMPCSGFPTQMCGGRSKMNVF 852
M E CA +C G FGLQY EC+ G E D + QL+D +CD+ C+G PT+ CGG SK++V+
Sbjct: 155 MTIERCADYCLN-SGFVFFGLQYMAECFCGHELDALSV---QLEDTDCDLACTGAPTETCGGSSKLSVY 219
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: A0A6G1GY36_9PEZI (WSC domain-containing protein n=1 Tax=Aulographum hederae CBS 113979 TaxID=1176131 RepID=A0A6G1GY36_9PEZI) HSP 1 Score: 65.1 bits (157), Expect = 5.200e-8 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 655 EMCASFCATVEGTTHFGLQYQRECY*GGEGDEYAQSGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAITGEGAPSEDA 888
E CASFC+ G T+FG++Y ECY G D + D++ C+M C+G PT++CGG S++NV+ + G S A
Sbjct: 1371 EFCASFCS---GFTYFGVEYSHECYCGNAIDP---TSTPADNSTCNMACTGDPTEICGGASRLNVYMLNGTVPSSSSA 1442
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: A8P297_COPC7 (Copper radical oxidase n=1 Tax=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) TaxID=240176 RepID=A8P297_COPC7) HSP 1 Score: 63.9 bits (154), Expect = 1.160e-7 Identity = 32/103 (31.07%), Postives = 50/103 (48.54%), Query Frame = 1
Query: 568 FEEIGCFLNGKLKTMTLSTAPGCDGTMNAEMCASFCATVEGTTHFGLQYQRECY*GGEGDEYAQSGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAITGEGAP 876
+E +GC+ +G TL T G + E C C G G +Y EC+ G + G + D +C+MPC+G +Q+CGG ++N++ TG P
Sbjct: 155 WESLGCYSDGVNGQRTLGTGVTVTGPLTLEKCTDACFNA-GYRLAGAEYAAECFCG----NFINQGAPVPDGQCNMPCAGNGSQLCGGPDRLNIYNYTGTALP 252
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: A0A7M7NPG4_STRPU (WSC domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NPG4_STRPU) HSP 1 Score: 59.3 bits (142), Expect = 2.050e-7 Identity = 32/105 (30.48%), Postives = 56/105 (53.33%), Query Frame = 1
Query: 550 SDTTPTFEE--IGCFLNGKLKTMTLSTAPGCDGTMNAEMCASFCATVEGT--THFGLQYQRECY*GGEGDEYAQSGDQLDDAECDMPCSGFPTQMCGGRSKMNVF 852
S T+++ +GCF + +K + L A M +C +C T+ T + G+++ ECY G G Y + G +D +CD PC+G T +CGG +K++++
Sbjct: 21 SSAVETYDDLYVGCFTDATIKRV-LPDAQLISDDMTITVCIDYCTTLTDTDSAYAGVEHANECYCGVAGTNYDRLG-VPEDGDCDFPCAGDNTNICGGINKISIY 123
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: G2Q335_MYCTT (Glyoxal oxidase like protein n=1 Tax=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) TaxID=573729 RepID=G2Q335_MYCTT) HSP 1 Score: 62.8 bits (151), Expect = 2.760e-7 Identity = 39/112 (34.82%), Postives = 65/112 (58.04%), Query Frame = 1
Query: 550 SDTTPTFEEIGCFLNGKLKTMTLSTAPGCDGT-MNAEMCASFCATVEGTTHFGLQYQRECY*GGEGDEYAQSGDQLDDAECDMPCSGFPTQMCGGRSKMNVF---AITGEGA 873
+D ++E GC+ + + T+++A DGT M C S+CA+ +G + G +Y EC+ G A S ++ D+EC+MPCSG P++ CG S++++F A+TG A
Sbjct: 30 TDLPDSWEYQGCYTD--VPGRTINSASYADGTNMTNAACLSYCAS-KGFPYAGTEYSVECFCG---TTLASSSAKVADSECNMPCSGAPSEPCGAGSRLSLFHSSAVTGPAA 135
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: UPI001874840B (WSC domain-containing protein n=1 Tax=Colletotrichum truncatum TaxID=5467 RepID=UPI001874840B) HSP 1 Score: 62.8 bits (151), Expect = 2.990e-7 Identity = 34/104 (32.69%), Postives = 58/104 (55.77%), Query Frame = 1
Query: 568 FEEIGCFLNGKLKTMTLSTAPGCDGTMNAEMCASFCATVEGTTHFGLQYQRECY*GGEGDEYAQSGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAITGEGAPS 879
+ +GC+ + LST D M +MCA+FCA G+ + G++Y +EC+ G + +Q D+ +C+MPC G T +CGG S++N++++ A S
Sbjct: 151 YISLGCYSDLVQGQRALSTVRA-DDAMTPDMCATFCA---GSAYMGIEYGKECWCGRNLNTLSQL--VKDETDCNMPCPGEKTSLCGGPSRLNLYSMNPSAAIS 248
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Match: A0A1B7Y9V0_COLHI (WSC domain-containing protein n=4 Tax=Colletotrichum destructivum species complex TaxID=2707350 RepID=A0A1B7Y9V0_COLHI) HSP 1 Score: 62.0 bits (149), Expect = 5.310e-7 Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 619 STAPGCDGTMNAEMCASFCATVEGTTHFGLQYQRECY*GGEGDEYAQSGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAI 858
ST+ G D M E CA+FC T+ L+Y REC+ G E D +Q D +C+MPC+G PT +CGG S++N++ +
Sbjct: 172 STSAGDD--MTPESCAAFCGRH---TYMALEYGRECWCGNELDGNSQR--VADQTDCNMPCAGDPTSLCGGPSRINLYKL 244 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13317.2657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13317.2657.1 >prot_Ecto-sp13_S_contig13317.2657.1 ID=prot_Ecto-sp13_S_contig13317.2657.1|Name=mRNA_Ecto-sp13_S_contig13317.2657.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=244bp VSSRHHSPGVARTTDGGCSRDPRCNDGFEGYDGGECSGLDRADYAFPVFEback to top mRNA from alignment at Ecto-sp13_S_contig13317:176..4322+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13317.2657.1 ID=mRNA_Ecto-sp13_S_contig13317.2657.1|Name=mRNA_Ecto-sp13_S_contig13317.2657.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4147bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13317:176..4322+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13317:176..4322+ >mRNA_Ecto-sp13_S_contig13317.2657.1 ID=mRNA_Ecto-sp13_S_contig13317.2657.1|Name=mRNA_Ecto-sp13_S_contig13317.2657.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=732bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13317:176..4322+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |